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UniProtKB/Swiss-Prot entry P55808


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name XG_HUMAN
Primary accession number P55808
Secondary accession number Q71BZ5
Integrated into Swiss-Prot on November 1, 1997
Sequence was last modified on November 1, 1997 (Sequence version 1)
Annotations were last modified on    June 10, 2008 (Entry version 59)
Name and origin of the protein
Protein name Glycoprotein Xg [Precursor]
Synonym Protein PBDX
Gene name
Name: XG
Synonyms: PBDX
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
TISSUE=Bone marrow;
DOI=10.1038/ng0494-394; PubMed=8054981 [NCBI, ExPASy, EBI, Israel, Japan]
Ellis N.A., Ye T.Z., Patton S., German J., Goodfellow P.N., Weller P.;
"Cloning of PBDX, an MIC2-related gene that spans the pseudoautosomal boundary on chromosome Xp.";
Nat. Genet. 6:394-400(1994).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
Naoko S., Fujiki K., Kanai A., Tanaka Y., Iwata T.;
"Identification of PBDX gene highly expressed in human cornea.";
Submitted (MAY-2001) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [MRNA].
Naoko S., Tanaka Y., Iwata T.;
"Molecular cloning and characterization of mouse PBDX.";
Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X96421; -; NOT_ANNOTATED_CDS; Genomic_DNA.[EMBL / GenBank / DDBJ]
AF380356; AAL04055.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF534880; AAN03481.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S43791; S43791.
RefSeq NP_780778.1; -.
UniGene Hs.179675
3D structure databases
ModBase P55808.
PTM databases
PhosphoSite P55808; -.
Organism-specific databases
H-InvDB HIX0056172; -.
HGNC HGNC:12806; XG.
GeneLynx XG; Homo sapiens.
GenAtlas XG.
MIM 314700; gene+phenotype. [NCBI / EBI]
PharmGKB PA37405; -.
GeneCards P55808.
Gene expression databases
ArrayExpress P55808; -.
CleanEx HS_XG; -.
GermOnline ENSG00000124343; Homo sapiens.
Ontologies
GO
GO:0016020; Cellular component: membrane (non-traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
BLOCKS P55808.
Genome annotation databases
Ensembl ENSG00000124343; Homo sapiens. [Contig view]
GeneID 7499; -.
KEGG hsa:7499; -.
NMPDR fig|9606.3.peg.32391; -.
Phylogenomic databases
HOVERGEN P55808; -.
Other
LinkHub P55808; -.
SOURCE XG; Homo sapiens.
ProtoNet P55808.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Blood group antigen; Glycoprotein; Membrane; Signal; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    21  21     Potential. 
CHAIN   22   180  159     Glycoprotein Xg. PRO_0000022693
TOPO_DOM   22   142  121     Extracellular (Potential). 
TRANSMEM   143   163  21     Potential. 
TOPO_DOM   164   180  17     Cytoplasmic (Potential). 
Sequence information
Length: 180 AA [This is the length of the unprocessed precursor] Molecular weight: 19723 Da [This is the MW of the unprocessed precursor] CRC64: DADAA9E6859C4530 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MESWWGLPCL AFLCFLMHAR GQRDFDLADA LDDPEPTKKP NSDIYPKPKP PYYPQPENPD 

        70         80         90        100        110        120 
SGGNIYPRPK PRPQPQPGNS GNSGGYFNDV DRDDGRYPPR PRPRPPAGGG GGGYSSYGNS 

       130        140        150        160        170        180 
DNTHGGDHHS TYGNPEGNMV AKIVSPIVSV VVVTLLGAAA SYFKLNNRRN CFRTHEPENV 

P55808 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

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