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UniProtKB/Swiss-Prot entry P50488


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DAF4_CAEEL
Primary accession number P50488
Secondary accession number O45139
Integrated into Swiss-Prot on October 1, 1996
Sequence was last modified on July 3, 2003 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 73)
Name and origin of the protein
Protein name Cell surface receptor daf-4 [Precursor]
Synonyms EC 2.7.11.30
Abnormal dauer formation protein 4
Gene name
Name: daf-4
ORFNames: C05D2.1
From
Caenorhabditis elegans [TaxID: 6239] 
Taxonomy Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1038/365644a0; PubMed=8413626 [NCBI, ExPASy, EBI, Israel, Japan]
Estevez M., Attisano L., Wrana J.L., Albert P.S., Massague J., Riddle D.L.;
"The daf-4 gene encodes a bone morphogenetic protein receptor controlling C. elegans dauer larva development.";
Nature 365:644-649(1993).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Bristol N2;
DOI=10.1126/science.282.5396.2012; PubMed=9851916 [NCBI, ExPASy, EBI, Israel, Japan]
The C. elegans sequencing consortium;
"Genome sequence of the nematode C. elegans: a platform for investigating biology.";
Science 282:2012-2018(1998).
[3]
FUNCTION, SUBUNIT, TISSUE SPECIFICITY, AND DEVELOPMENTAL STAGE.
PubMed=10887089 [NCBI, ExPASy, EBI, Israel, Japan]
Gunther C.V., Georgi L.L., Riddle D.L.;
"A Caenorhabditis elegans type I TGF beta receptor can function in the absence of type II kinase to promote larval development.";
Development 127:3337-3347(2000).
[4]
GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-60 AND ASN-134, AND MASS SPECTROMETRY.
DOI=10.1074/mcp.M600392-MCP200; PubMed=17761667 [NCBI, ExPASy, EBI, Israel, Japan]
Kaji H., Kamiie J., Kawakami H., Kido K., Yamauchi Y., Shinkawa T., Taoka M., Takahashi N., Isobe T.;
"Proteomics reveals N-linked glycoprotein diversity in Caenorhabditis elegans and suggests an atypical translocation mechanism for integral membrane proteins.";
Mol. Cell. Proteomics 6:2100-2109(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L23110; AAA03544.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF047651; AAC02726.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR D88462; D88462.
S38279; S38279.
RefSeq NP_498211.1; -.
UniGene Cel.6349
3D structure databases
HSSP P36897; 1IAS. [HSSP ENTRY / PDB]
ModBase P50488.
Protein-protein interaction databases
IntAct P50488; -.
Organism-specific databases
WormBase WBGene00000900; daf-4.
WormPep C05D2.1a; CE16827. [WormPep / WorfDB]
Gene expression databases
ArrayExpress P50488; -.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
GO:0040024; Biological process: dauer larval development (inferred from mutant phenotype from WormBase).
GO:0030514; Biological process: negative regulation of BMP signaling pathway (inferred from mutant phenotype from WormBase).
GO:0018991; Biological process: oviposition (inferred from mutant phenotype from WormBase).
GO:0030513; Biological process: positive regulation of BMP signaling pathway (inferred from mutant phenotype from WormBase).
GO:0040010; Biological process: positive regulation of growth rate (inferred from mutant phenotype from WormBase).
GO:0040018; Biological process: positive regulation of multicellular organism growth (inferred from mutant phenotype from WormBase).
QuickGo view.
Family and domain databases
InterPro IPR000333; Activin_II_recpt.
IPR000719; Prot_kinase_core.
IPR017441; Protein_kinase_ATP_bd_CS.
IPR017442; Se/Thr_pkinase-rel.
IPR008271; Ser_thr_pkin_AS.
Graphical view of domain structure.
Pfam PF00069; Pkinase; 1.
Pfam graphical view of domain structure.
PRINTS PR00653; ACTIVIN2R.
ProDom PD000001; Prot_kinase; 1.
[Domain structure / List of seq. sharing at least 1 domain]
PROSITE PS00107; PROTEIN_KINASE_ATP; FALSE_NEG.
PS50011; PROTEIN_KINASE_DOM; 1.
PS00108; PROTEIN_KINASE_ST; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P50488.
Genome annotation databases
Ensembl C05D2.1; Caenorhabditis elegans. [Contig view]
GeneID 175781; -.
Other
ProtoNet P50488.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Complete proteome; Developmental protein; Glycoprotein; Kinase; Membrane; Nucleotide-binding; Receptor; Serine/threonine-protein kinase; Signal; Transferase; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    31  31     Potential. 
CHAIN   32   744  713     Cell surface receptor daf-4. PRO_0000024431
TOPO_DOM   48   253  206     Extracellular (Potential). 
TRANSMEM   254   274  21     Potential. 
TOPO_DOM   275   744  470     Cytoplasmic (Potential). 
DOMAIN   306   603  298     Protein kinase. 
NP_BIND   312   320  9     ATP (By similarity). 
ACT_SITE   440   440        Proton acceptor (By similarity). 
BINDING   338   338        ATP (By similarity). 
CARBOHYD   60    60        N-linked (GlcNAc...). 
CARBOHYD   134   134        N-linked (GlcNAc...). 
CARBOHYD   165   165        N-linked (GlcNAc...) (Potential). 
CONFLICT   374   374        A -> P (in Ref. 1; AAA03544). 
CONFLICT   545   545        L -> R (in Ref. 1; AAA03544). 
Sequence information
Length: 744 AA [This is the length of the unprocessed precursor] Molecular weight: 84410 Da [This is the MW of the unprocessed precursor] CRC64: 33C087871FD81AF0 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNQKGTVRLK ALVLICLPLF LIATPVPVAV TEDDRQDRIE SEAAEKEWAN TLVSKVAQSN 

        70         80         90        100        110        120 
GTGTIKVSAP AKPTLRRMDN EEDEVISIEC VYYDEMECEK SGDCEITKKT CYSEAHLKAV 

       130        140        150        160        170        180 
GCLAVFGLPT QEINSTEPYL KVDKPQYKSL GCMPYQHADS MNCENESSCR QGRSFRGGIG 

       190        200        210        220        230        240 
MCCCSTNNCN MPDLIEMVNP SLKKDSDNSA LLWASTPSNM DLESLDKFPF YWIIIIALSV 

       250        260        270        280        290        300 
ILCIALLILA YVGWKFQQNK KEEIKKQQKI KFDMEKTDAL EAGNVPLVEP EEEMIEMVET 

       310        320        330        340        350        360 
PKELPITDFQ LISKGRFGKV FKAQYTPDSG EKRLVAVKKL NEFQKASFLA EKRIFDELNE 

       370        380        390        400        410        420 
YPKWYKSIVE FVCAEKIGDE YWIVTEFHER LSLYELLKNN VISITSANRI IMSMIDGLQF 

       430        440        450        460        470        480 
LHDDRPYFFG HPKKPIIHRD IKSKNILVKS DMTTCIADFG LARIYSYDIE QSDLLGQVGT 

       490        500        510        520        530        540 
KRYMSPEMLE GATEFTPTAF KAMDVYSMGL VMWEVISRTK LHQTDEPPNY QMPFQVIGFD 

       550        560        570        580        590        600 
PTIGLMRNYV VSKKERPQWR DEIIKHEYMS LLKKVTEEMW DPEACARITA GCAFARVWNH 

       610        620        630        640        650        660 
IMSSPDSSEG YHSGSSMKNR GVDDVEQSEK PEGIEEMQHY HASSPSKRQH PSPNPFFDSC 

       670        680        690        700        710        720 
PPPPPIPVIL ENGGILQPDN AEPEPEELPD LPIVEKIYDI ATNMLFSREE LDLMNAQRQV 

       730        740 
EYEAGADTRA STPTPSGTFG TFTT 

P50488 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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