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UniProtKB/Swiss-Prot entry P38081


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name YBQ6_YEAST
Primary accession number P38081
Secondary accession numbers None
Integrated into Swiss-Prot on October 1, 1994
Sequence was last modified on October 1, 1994 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 59)
Name and origin of the protein
Protein name Uncharacterized glycosyl hydrolase YBR056W
Synonym EC 3.2.1.-
Gene name
OrderedLocusNames: YBR056W
ORFNames: YBR0510
From
Saccharomyces cerevisiae (Baker's yeast) [TaxID: 4932] 
Taxonomy Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=ATCC 204508 / S288c;
DOI=10.1002/yea.320110511; PubMed=7597852 [NCBI, ExPASy, EBI, Israel, Japan]
Aljinovic G., Pohl T.M.;
"Sequence and analysis of 24 kb on chromosome II of Saccharomyces cerevisiae.";
Yeast 11:475-479(1995).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 204508 / S288c;
PubMed=7813418 [NCBI, ExPASy, EBI, Israel, Japan]
Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C., Demolis N., Delaveau T., Doignon F., Domdey H., Duesterhus S., Dubois E., Dujon B., El Bakkoury M., Entian K.-D., Feuermann M., Fiers W., Fobo G.M., Fritz C., Gassenhuber J., Glansdorff N., Goffeau A., Grivell L.A., de Haan M., Hein C., Herbert C.J., Hollenberg C.P., Holmstroem K., Jacq C., Jacquet M., Jauniaux J.-C., Jonniaux J.-L., Kallesoee T., Kiesau P., Kirchrath L., Koetter P., Korol S., Liebl S., Logghe M., Lohan A.J.E., Louis E.J., Li Z.Y., Maat M.J., Mallet L., Mannhaupt G., Messenguy F., Miosga T., Molemans F., Mueller S., Nasr F., Obermaier B., Perea J., Pierard A., Piravandi E., Pohl F.M., Pohl T.M., Potier S., Proft M., Purnelle B., Ramezani Rad M., Rieger M., Rose M., Schaaff-Gerstenschlaeger I., Scherens B., Schwarzlose C., Skala J., Slonimski P.P., Smits P.H.M., Souciet J.-L., Steensma H.Y., Stucka R., Urrestarazu L.A., van der Aart Q.J.M., Van Dyck L., Vassarotti A., Vetter I., Vierendeels F., Vissers S., Wagner G., de Wergifosse P., Wolfe K.H., Zagulski M., Zimmermann F.K., Mewes H.-W., Kleine K.;
"Complete DNA sequence of yeast chromosome II.";
EMBO J. 13:5795-5809(1994).
[3]
LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
DOI=10.1038/nature02046; PubMed=14562106 [NCBI, ExPASy, EBI, Israel, Japan]
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.;
"Global analysis of protein expression in yeast.";
Nature 425:737-741(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z35925; CAA84999.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z46260; CAA86399.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S45914; S45914.
RefSeq NP_009612.1; -.
3D structure databases
ModBase P38081.
Protein-protein interaction databases
DIP DIP:5444N; -.
IntAct P38081; -.
Organism-specific databases
CYGD YBR056w; -.
SGD S000000260; YBR056W.
Yeast-GFP YBR056W.
Gene expression databases
ArrayExpress P38081; -.
GermOnline YBR056W; Saccharomyces cerevisiae.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from direct assay from SGD).
GO:0042802; Molecular function: identical protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR001547; Glyco_hydro_5.
IPR013781; Glyco_hydro_sub_cat.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.80; Glyco_hydro_cat; 1.
PROSITE PS00659; GLYCOSYL_HYDROL_F5; FALSE_NEG.
BLOCKS P38081.
Proteomic databases
PeptideAtlas P38081; -.
Genome annotation databases
Ensembl YBR056W; Saccharomyces cerevisiae. [Contig view]
GeneID 852346; -.
GenomeReviews Y13134_GR; YBR056W.
KEGG sce:YBR056W; -.
NMPDR fig|4932.3.peg.307; -.
Phylogenomic databases
HOGENOM P38081; -.
Other
LinkHub P38081; -.
ProtoNet P38081.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Glycosidase; Hydrolase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   501  501     Uncharacterized glycosyl hydrolase YBR056W. PRO_0000184055
ACT_SITE   236   236        Proton donor (By similarity). 
ACT_SITE   333   333        Nucleophile (By similarity). 
Sequence information
Length: 501 AA [This is the length of the unprocessed precursor] Molecular weight: 57822 Da [This is the MW of the unprocessed precursor] CRC64: 5133A161736ADDD3 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MIGSLRNKFE HFKVSEKGGQ NLSTTLPKLP PAKDLDRSTI YKYRYNYGVN LGALFVLEPW 

        70         80         90        100        110        120 
IFSKETICTI DGKEYDSEFD AISQQLKKHS SEDVAKMLSD HYKKYIDRID WEWLSKDAHI 

       130        140        150        160        170        180 
TALRIPIGYW HVEDGKHLDS LPFAPLRKVY ELAKPWEKLG ELINNAKKMS IGVLIDLHGL 

       190        200        210        220        230        240 
PGGANCDSHS GSKSGEAAFF HKEKYMTKVY KDILPAIINT MTLGNENIIG IQVVNEACFD 

       250        260        270        280        290        300 
NNPKGQKFYY SEAINTVEKL QPGLPVIISD GWWPQQWADW VKEKHFSEIV VIDSHVYRCF 

       310        320        330        340        350        360 
SDSDKSKDAN SIIKDLPNTV NFPHEDADYT VGEFSGVLDG QTWNKTSGDR DAIVQKYVQT 

       370        380        390        400        410        420 
QADVFSHVAS WGWFFWTLQF EYGDGGEWGL APMMQKGNLP KRPHGDDLQV DKKKIDSIIH 

       430        440        450        460        470        480 
EHEAYWNGKG KNFEHWRFED GIKTAVDDII AFRKFDNSLI GRWHSWKSQR RAEYVSAKKD 

       490        500 
SEFMWEWDQG YQRGLDEFNK Y 

P38081 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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