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UniProtKB/Swiss-Prot entry P36894


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BMR1A_HUMAN
Primary accession number P36894
Secondary accession number Q8NEN8
Integrated into Swiss-Prot on June 1, 1994
Sequence was last modified on March 15, 2005 (Sequence version 2)
Annotations were last modified on    June 10, 2008 (Entry version 103)
Name and origin of the protein
Protein name Bone morphogenetic protein receptor type-1A [Precursor]
Synonyms EC 2.7.11.30
Serine/threonine-protein kinase receptor R5
SKR5
Activin receptor-like kinase 3
ALK-3
CD292 antigen
Gene name
Name: BMPR1A
Synonyms: ACVRLK3, ALK3
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT THR-2.
TISSUE=Placenta;
PubMed=8397373 [NCBI, ExPASy, EBI, Israel, Japan]
ten Dijke P., Ichijo H., Franzen P., Schulz P., Saras J., Toyoshima H., Heldin C.-H., Miyazono K.;
"Activin receptor-like kinases: a novel subclass of cell-surface receptors with predicted serine/threonine kinase activity.";
Oncogene 8:2879-2887(1993).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Testis;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-215; SER-216; SER-218 AND SER-220, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1016/j.cell.2006.09.026; PubMed=17081983 [NCBI, ExPASy, EBI, Israel, Japan]
Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M.;
"Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.";
Cell 127:635-648(2006).
[4]
X-RAY CRYSTALLOGRAPHY (2.9 ANGSTROMS) OF 55-143 IN COMPLEX WITH BMP-2.
DOI=10.1038/75903; PubMed=10881198 [NCBI, ExPASy, EBI, Israel, Japan]
Kirsch T., Sebald W., Dreyer M.K.;
"Crystal structure of the BMP-2-BRIA ectodomain complex.";
Nat. Struct. Biol. 7:492-496(2000).
[5]
DISEASE.
DOI=10.1038/88919; PubMed=11381269 [NCBI, ExPASy, EBI, Israel, Japan]
Howe J.R., Bair J.L., Sayed M.G., Anderson M.E., Mitros F.A., Petersen G.M., Velculescu V.E., Traverso G., Vogelstein B.;
"Germline mutations of the gene encoding bone morphogenetic protein receptor 1A in juvenile polyposis.";
Nat. Genet. 28:184-187(2001).
[6]
VARIANTS JPS ARG-124 AND TYR-376, AND VARIANT CD ASP-338.
DOI=10.1086/323703; PubMed=11536076 [NCBI, ExPASy, EBI, Israel, Japan]
Zhou X.-P., Woodford-Richens K., Lehtonen R., Kurose K., Aldred M., Hampel H., Launonen V., Virta S., Pilarski R., Salovaara R., Bodmer W.F., Conrad B.A., Dunlop M., Hodgson S.V., Iwama T., Jaervinen H., Kellokumpu I., Kim J.C., Leggett B., Markie D., Mecklin J.-P., Neale K., Phillips R., Piris J., Rozen P., Houlston R.S., Aaltonen L.A., Tomlinson I.P.M., Eng C.;
"Germline mutations in BMPR1A/ALK3 cause a subset of cases of juvenile polyposis syndrome and of Cowden and Bannayan-Riley-Ruvalcaba syndromes.";
Am. J. Hum. Genet. 69:704-711(2001).
[7]
VARIANTS JPS ASP-62; TYR-82 AND CYS-443.
PubMed=12417513 [NCBI, ExPASy, EBI, Israel, Japan]
Sayed M.G., Ahmed A.F., Ringold J.R., Anderson M.E., Bair J.L., Mitros F.A., Lynch H.T., Tinley S.T., Petersen G.M., Giardiello F.M., Vogelstein B., Howe J.R.;
"Germline SMAD4 or BMPR1A mutations and phenotype of juvenile polyposis.";
Ann. Surg. Oncol. 9:901-906(2002).
[8]
VARIANT JPS ARG-130.
DOI=10.1007/s00439-002-0748-9; PubMed=12136244 [NCBI, ExPASy, EBI, Israel, Japan]
Friedl W., Uhlhaas S., Schulmann K., Stolte M., Loff S., Back W., Mangold E., Stern M., Knaebel H.P., Sutter C., Weber R.G., Pistorius S., Burger B., Propping P.;
"Juvenile polyposis: massive gastric polyposis is more common in MADH4 mutation carriers than in BMPR1A mutation carriers.";
Hum. Genet. 111:108-111(2002).
[9]
VARIANT JPS THR-470.
DOI=10.1034/j.1399-0004.2003.00008.x; PubMed=12630959 [NCBI, ExPASy, EBI, Israel, Japan]
Kim I.J., Park J.H., Kang H.C., Kim K.H., Kim J.H., Ku J.L., Kang S.B., Park S.Y., Lee J.S., Park J.G.;
"Identification of a novel BMPR1A germline mutation in a Korean juvenile polyposis patient without SMAD4 mutation.";
Clin. Genet. 63:126-130(2003).
[10]
INVOLVEMENT IN HEREDITARY MIXED POLYPOSIS SYNDROME 2.
DOI=10.1136/jmg.2005.034827; PubMed=16525031 [NCBI, ExPASy, EBI, Israel, Japan]
Cao X., Eu K.W., Kumarasinghe M.P., Li H.H., Loi C., Cheah P.Y.;
"Mapping of hereditary mixed polyposis syndrome (HMPS) to chromosome 10q23 by genomewide high-density single nucleotide polymorphism (SNP) scan and identification of BMPR1A loss of function.";
J. Med. Genet. 43:E13-E13(2006).
[11]
VARIANTS [LARGE SCALE ANALYSIS] THR-2; TYR-58; CYS-443; MET-450 AND GLN-486.
DOI=10.1038/nature05610; PubMed=17344846 [NCBI, ExPASy, EBI, Israel, Japan]
Greenman C., Stephens P., Smith R., Dalgliesh G.L., Hunter C., Bignell G., Davies H., Teague J., Butler A., Stevens C., Edkins S., O'Meara S., Vastrik I., Schmidt E.E., Avis T., Barthorpe S., Bhamra G., Buck G., Choudhury B., Clements J., Cole J., Dicks E., Forbes S., Gray K., Halliday K., Harrison R., Hills K., Hinton J., Jenkinson A., Jones D., Menzies A., Mironenko T., Perry J., Raine K., Richardson D., Shepherd R., Small A., Tofts C., Varian J., Webb T., West S., Widaa S., Yates A., Cahill D.P., Louis D.N., Goldstraw P., Nicholson A.G., Brasseur F., Looijenga L., Weber B.L., Chiew Y.-E., DeFazio A., Greaves M.F., Green A.R., Campbell P., Birney E., Easton D.F., Chenevix-Trench G., Tan M.-H., Khoo S.K., Teh B.T., Yuen S.T., Leung S.Y., Wooster R., Futreal P.A., Stratton M.R.;
"Patterns of somatic mutation in human cancer genomes.";
Nature 446:153-158(2007).
Comments
  • FUNCTION: On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for BMP-2 and BMP-4.
  • CATALYTIC ACTIVITY: ATP + [receptor-protein] = ADP + [receptor-protein] phosphate.
  • COFACTOR: Magnesium or manganese (By similarity).
  • SUBCELLULAR LOCATION: Membrane; Single-pass type I membrane protein.
  • TISSUE SPECIFICITY: Highly expressed in skeletal muscle.
  • DISEASE: Defects in BMPR1A are a cause of juvenile polyposis syndrome (JPS) [MIM:174900]; also known as juvenile intestinal polyposis (JIP). JPS is an autosomal dominant gastrointestinal hamartomatous polyposis syndrome in which patients are at risk for developing gastrointestinal cancers. The lesions are typified by a smooth histological appearance, predominant stroma, cystic spaces and lack of a smooth muscle core. Multiple juvenile polyps usually occur in a number of Mendelian disorders. Sometimes, these polyps occur without associated features as in JPS; here, polyps tend to occur in the large bowel and are associated with an increased risk of colon and other gastrointestinal cancers.
  • DISEASE: Defects in BMPR1A are a cause of Cowden disease (CD) [MIM:158350]. CD is an autosomal dominant cancer syndrome characterized by multiple hamartomas and by a high risk for breast, thyroid and endometrial cancers.
  • DISEASE: Defects in BMPR1A are the cause of hereditary mixed polyposis syndrome 2 (HMPS2) [MIM:610069]. Hereditary mixed polyposis syndrome (HMPS) is characterized by atypical juvenile polyps, colonic adenomas, and colorectal carcinomas.
  • SIMILARITY: Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
  • SIMILARITY: Contains 1 GS domain.
  • SIMILARITY: Contains 1 protein kinase domain.
  • WEB RESOURCE: Name=GeneReviews; URL="http://www.genetests.org/query?gene=BMPR1A";.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z22535; CAA80257.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC028383; AAH28383.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR I37163; I37163.
RefSeq NP_004320.2; -.
UniGene Hs.524477
3D structure databases
PDB
1ES7; X-ray; 2.90 A; B/D=55-143.[ExPASy / RCSB / EBI]
1REW; X-ray; 1.86 A; C/D=24-152.[ExPASy / RCSB / EBI]
2GOO; X-ray; 2.20 A; B/E=24-152.[ExPASy / RCSB / EBI]
2H62; X-ray; 1.85 A; C=24-152.[ExPASy / RCSB / EBI]
2H64; X-ray; 1.92 A; B=24-152.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1ES7; -.
1REW; -.
2GOO; -.
2H62; -.
2H64; -.
ModBase P36894.
Protein-protein interaction databases
DIP DIP:5793N; -.
IntAct P36894; -.
PTM databases
PhosphoSite P36894; -.
Organism-specific databases
H-InvDB HIX0026073; -.
HIX0036564; -.
HGNC HGNC:1076; BMPR1A.
GeneLynx BMPR1A; Homo sapiens.
GenAtlas BMPR1A.
MIM 158350; phenotype. [NCBI / EBI]
174900; phenotype. [NCBI / EBI]
601299; gene. [NCBI / EBI]
610069; phenotype. [NCBI / EBI]
Orphanet 201; Cowden syndrome.
2929; Juvenile gastrointestinal polyposis.
79076; Juvenile polyposis of infancy.
65285; Lhermitte-Duclos disease.
PharmGKB PA25386; -.
GeneCards P36894.
Gene expression databases
ArrayExpress P36894; -.
CleanEx HS_BMPR1A; -.
Ontologies
GO
GO:0016021; Cellular component: integral to membrane (traceable author statement from ProtInc).
GO:0005886; Cellular component: plasma membrane (inferred from experiment from Reactome).
GO:0005524; Molecular function: ATP binding (inferred from direct assay from HGNC).
GO:0004674; Molecular function: protein serine/threonine kinase activity (inferred from direct assay from HGNC).
GO:0046332; Molecular function: SMAD binding (inferred from direct assay from HGNC).
GO:0030509; Biological process: BMP signaling pathway (inferred from experiment from Reactome).
GO:0006468; Biological process: protein amino acid phosphorylation (inferred from direct assay from HGNC).
GO:0007179; Biological process: transforming growth factor beta receptor signaling pathway (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR000333; Activin_II_recpt.
IPR000472; Activin_rcpt.
IPR000719; Prot_kinase_core.
IPR017441; Protein_kinase_ATP_bd_CS.
IPR008271; Ser_thr_pkin_AS.
IPR003605; TGF_beta_rcpt_GS.
Graphical view of domain structure.
Pfam PF01064; Activin_recp; 1.
PF08515; TGF_beta_GS; 1.
Pfam graphical view of domain structure.
PRINTS PR00653; ACTIVIN2R.
ProDom PD000001; Prot_kinase; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00467; GS; 1.
SMART graphical view of domain structure.
PROSITE PS51256; GS; 1.
PS00107; PROTEIN_KINASE_ATP; 1.
PS50011; PROTEIN_KINASE_DOM; 1.
PS00108; PROTEIN_KINASE_ST; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P36894.
Genome annotation databases
Ensembl ENSG00000107779; Homo sapiens. [Contig view]
GeneID 657; -.
KEGG hsa:657; -.
Phylogenomic databases
HOGENOM P36894; -.
HOVERGEN P36894; -.
Other
LinkHub P36894; -.
SOURCE BMPR1A; Homo sapiens.
ProtoNet P36894.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; ATP-binding; Disease mutation; Glycoprotein; Kinase; Magnesium; Manganese; Membrane; Metal-binding; Nucleotide-binding; Phosphoprotein; Polymorphism; Receptor; Serine/threonine-protein kinase; Signal; Transferase; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    23  23     Potential. 
CHAIN   24   532  509     Bone morphogenetic protein receptor type-1A. PRO_0000024410
TOPO_DOM   24   152  129     Extracellular (Potential). 
TRANSMEM   153   176  24     Potential. 
TOPO_DOM   177   532  356     Cytoplasmic (Potential). 
DOMAIN   204   233  30     GS. 
DOMAIN   234   525  292     Protein kinase. 
NP_BIND   240   248  9     ATP (By similarity). 
ACT_SITE   362   362        Proton acceptor (By similarity). 
BINDING   261   261        ATP (By similarity). 
MOD_RES   215   215        Phosphoserine. 
MOD_RES   216   216        Phosphoserine. 
MOD_RES   218   218        Phosphoserine. 
MOD_RES   220   220        Phosphoserine. 
CARBOHYD   73    73        N-linked (GlcNAc...) (Potential). 
DISULFID   61    82         
DISULFID   63    67         
DISULFID   76   100         
DISULFID   110   124         
DISULFID   125   130         
VARIANT   2     2  1     P -> T. VAR_041397 
VARIANT   58    58  1     F -> Y (in a renal clear cell carcinoma sample; somatic mutation). VAR_041398 [3D]
VARIANT   62    62  1     Y -> D (in JPS). VAR_022828 [3D]
VARIANT   82    82  1     C -> Y (in JPS). VAR_022829 [3D]
VARIANT   124   124  1     C -> R (in JPS). VAR_015533 [3D]
VARIANT   130   130  1     C -> R (in JPS). VAR_022830 [3D]
VARIANT   338   338  1     A -> D (in CD). VAR_015534 
VARIANT   376   376  1     C -> Y (in JPS). VAR_015535 
VARIANT   443   443  1     R -> C (in JPS). VAR_022831 
VARIANT   450   450  1     V -> M. VAR_041399 
VARIANT   470   470  1     M -> T (in JPS). VAR_022832 
VARIANT   486   486  1     R -> Q (in a gastric adenocarcinoma sample; somatic mutation). VAR_041400 
STRAND   59    62  4      
STRAND   64    66  3      
STRAND   75    88  14      
STRAND   94   101  8      
HELIX   106   111  6      
STRAND   120   125  6      
HELIX   130   133  4      
Sequence information
Length: 532 AA [This is the length of the unprocessed precursor] Molecular weight: 60198 Da [This is the MW of the unprocessed precursor] CRC64: 00CE2DDDA3A44170 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPQLYIYIRL LGAYLFIISR VQGQNLDSML HGTGMKSDSD QKKSENGVTL APEDTLPFLK 

        70         80         90        100        110        120 
CYCSGHCPDD AINNTCITNG HCFAIIEEDD QGETTLASGC MKYEGSDFQC KDSPKAQLRR 

       130        140        150        160        170        180 
TIECCRTNLC NQYLQPTLPP VVIGPFFDGS IRWLVLLISM AVCIIAMIIF SSCFCYKHYC 

       190        200        210        220        230        240 
KSISSRRRYN RDLEQDEAFI PVGESLKDLI DQSQSSGSGS GLPLLVQRTI AKQIQMVRQV 

       250        260        270        280        290        300 
GKGRYGEVWM GKWRGEKVAV KVFFTTEEAS WFRETEIYQT VLMRHENILG FIAADIKGTG 

       310        320        330        340        350        360 
SWTQLYLITD YHENGSLYDF LKCATLDTRA LLKLAYSAAC GLCHLHTEIY GTQGKPAIAH 

       370        380        390        400        410        420 
RDLKSKNILI KKNGSCCIAD LGLAVKFNSD TNEVDVPLNT RVGTKRYMAP EVLDESLNKN 

       430        440        450        460        470        480 
HFQPYIMADI YSFGLIIWEM ARRCITGGIV EEYQLPYYNM VPSDPSYEDM REVVCVKRLR 

       490        500        510        520        530 
PIVSNRWNSD ECLRAVLKLM SECWAHNPAS RLTALRIKKT LAKMVESQDV KI 

P36894 in FASTA format

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