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UniProtKB/Swiss-Prot entry P35407


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CXCR2_RAT
Primary accession number P35407
Secondary accession numbers None
Integrated into Swiss-Prot on June 1, 1994
Sequence was last modified on February 1, 1996 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 62)
Name and origin of the protein
Protein name High affinity interleukin-8 receptor B
Synonyms IL-8R B
CXCR-2
GRO/MGSA receptor
CD182 antigen
Gene name
Name: Il8rb
Synonyms: Cxcr2
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Sprague-Dawley;
TISSUE=Lung;
DOI=10.1016/S0005-2736(97)00065-5; PubMed=9218548 [NCBI, ExPASy, EBI, Israel, Japan]
Gobl A.E., Huang M.R., Wang S., Zhou Y., Oeberg K.;
"Molecular cloning and characterization of a cDNA encoding the rat interleukin-8 receptor.";
Biochim. Biophys. Acta 1326:171-177(1997).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=Wistar;
TISSUE=Liver;
Konishi K., Shibata F., Watanabe K., Tsurufuji S., Nakagawa H., Fujioka M.;
Submitted (JUL-1995) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=Wistar;
TISSUE=Lung, and Spleen;
DOI=10.1074/jbc.271.51.32770; PubMed=8955112 [NCBI, ExPASy, EBI, Israel, Japan]
Dunstan C.-A.N., Salafranca M.N., Adhikari S., Xia Y., Feng L., Harrison J.K.;
"Identification of two rat genes orthologous to the human interleukin-8 receptors.";
J. Biol. Chem. 271:32770-32776(1996).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X77797; CAA54824.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D63584; BAA09797.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U70988; AAC52961.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S42096; S42096.
RefSeq NP_058879.1; -.
UniGene Rn.90347
3D structure databases
ModBase P35407.
Protein-protein interaction databases
IntAct P35407; -.
Protein family/group databases
GPCRDB P35407; CXCR2_RAT.
Organism-specific databases
RGD 2906; Il8rb.
Gene expression databases
ArrayExpress P35407; -.
GermOnline ENSRNOG00000014269; Rattus norvegicus.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR001277; CXC_4_rcpt.
IPR000276; GPCR_Rhodpsn.
IPR017452; GPCR_Rhodpsn_supfam.
IPR000174; IL8_rcpt.
IPR000057; IL8B_rcpt.
Graphical view of domain structure.
Pfam PF00001; 7tm_1; 1.
Pfam graphical view of domain structure.
PRINTS PR00645; CXCCHMKINER4.
PR00237; GPCRRHODOPSN.
PR00427; INTRLEUKIN8R.
PR00573; INTRLEUKN8BR.
PROSITE PS00237; G_PROTEIN_RECEP_F1_1; 1.
PS50262; G_PROTEIN_RECEP_F1_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P35407.
Genome annotation databases
Ensembl ENSRNOG00000014269; Rattus norvegicus. [Contig view]
GeneID 29385; -.
KEGG rno:29385; -.
Phylogenomic databases
HOVERGEN P35407; -.
Other
GPCRDB-Snakes P35407.
ProtoNet P35407.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cell membrane; Chemotaxis; G-protein coupled receptor; Glycoprotein; Membrane; Phosphoprotein; Receptor; Transducer; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   359  359     High affinity interleukin-8 receptor B. PRO_0000069342
TOPO_DOM   1    47  47     Extracellular (Potential). 
TRANSMEM   48    74  27     1 (Potential). 
TOPO_DOM   75    83  9     Cytoplasmic (Potential). 
TRANSMEM   84   104  21     2 (Potential). 
TOPO_DOM   105   119  15     Extracellular (Potential). 
TRANSMEM   120   141  22     3 (Potential). 
TOPO_DOM   142   162  21     Cytoplasmic (Potential). 
TRANSMEM   163   182  20     4 (Potential). 
TOPO_DOM   183   207  25     Extracellular (Potential). 
TRANSMEM   208   230  23     5 (Potential). 
TOPO_DOM   231   250  20     Cytoplasmic (Potential). 
TRANSMEM   251   272  22     6 (Potential). 
TOPO_DOM   273   296  24     Extracellular (Potential). 
TRANSMEM   297   314  18     7 (Potential). 
TOPO_DOM   315   359  45     Cytoplasmic (Potential). 
MOD_RES   346   346        Phosphoserine (By similarity). 
MOD_RES   350   350        Phosphoserine (By similarity). 
MOD_RES   351   351        Phosphoserine (By similarity). 
MOD_RES   352   352        Phosphoserine (By similarity). 
CARBOHYD   8     8        N-linked (GlcNAc...) (Potential). 
CARBOHYD   23    23        N-linked (GlcNAc...) (Potential). 
CARBOHYD   201   201        N-linked (GlcNAc...) (Potential). 
CARBOHYD   202   202        N-linked (GlcNAc...) (Potential). 
DISULFID   118   195        By similarity. 
Sequence information
Length: 359 AA [This is the length of the unprocessed precursor] Molecular weight: 40532 Da [This is the MW of the unprocessed precursor] CRC64: EF547326A074ABDD [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGEIRVDNFS LEDFFSGDID SYNYSSDPPF TLSDAAPCPS ANLDINRYAV VVIYVLVTLL 

        70         80         90        100        110        120 
SLVGNSLVML VILYNRSTCS VTDVYLLNLA IADLFFALTL PVWAASKVNG WIFGSFLCKV 

       130        140        150        160        170        180 
FSFLQEITFY SSVLLLACIS MDRYLAIVHA TSTLIQKRHL VKFVCITMWF LSLVLSLPIF 

       190        200        210        220        230        240 
ILRTTVKANP STVVCYENIG NNTSKWRVVL RILPQTYGFL LPLLIMLFCY GFTLRTLFKA 

       250        260        270        280        290        300 
HMGQKHRAMR VIFAVVLVFL LCWLPYNIVL FTDTLMRTKL IKETCERQNE INKALEATEI 

       310        320        330        340        350 
LGFLHSCLNP IIYAFIGQKF RHGLLKIMAN YGLVSKEFLA KEGRPSFVGS SSANTSTTL 

P35407 in FASTA format

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