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UniProtKB/Swiss-Prot entry P35129


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name UBC2_CAEEL
Primary accession number P35129
Secondary accession numbers None
Integrated into Swiss-Prot on February 1, 1994
Sequence was last modified on February 1, 1994 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 66)
Name and origin of the protein
Protein name Ubiquitin-conjugating enzyme E2 2
Synonyms EC 6.3.2.19
Ubiquitin-protein ligase 2
Ubiquitin carrier protein 2
Lethal protein 70
Gene name
Name: let-70
Synonyms: ubc-2
ORFNames: M7.1
From
Caenorhabditis elegans [TaxID: 6239] 
Taxonomy Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=8441382 [NCBI, ExPASy, EBI, Israel, Japan]
Zhen M., Heinlein R., Jones D., Jentsch S., Candido E.P.M.;
"The ubc-2 gene of Caenorhabditis elegans encodes a ubiquitin-conjugating enzyme involved in selective protein degradation.";
Mol. Cell. Biol. 13:1371-1377(1993).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND IDENTIFICATION AS LET-70.
PubMed=8670823 [NCBI, ExPASy, EBI, Israel, Japan]
Zhen M., Scheni J.E., Baillie D.L., Candido E.P.M.;
"An essential ubiquitin-conjugating enzyme with tissue and developmental specificity in the nematode Caenorhabditis elegans.";
EMBO J. 15:3229-3237(1996).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Bristol N2;
DOI=10.1126/science.282.5396.2012; PubMed=9851916 [NCBI, ExPASy, EBI, Israel, Japan]
The C. elegans sequencing consortium;
"Genome sequence of the nematode C. elegans: a platform for investigating biology.";
Science 282:2012-2018(1998).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
S56051; AAB25489.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z68337; CAA92745.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A48145; A48145.
T23820; T23820.
RefSeq NP_502065.1; -.
UniGene Cel.18192
3D structure databases
PDB
1Z2U; X-ray; 1.10 A; A=1-147.[ExPASy / RCSB / EBI]
PDBsum 1Z2U; -.
ModBase P35129.
Protein-protein interaction databases
DIP DIP:24306N; -.
IntAct P35129; -.
Organism-specific databases
WormBase WBGene00002344; let-70.
WormPep M7.1; CE03482. [WormPep / WorfDB]
Gene expression databases
ArrayExpress P35129; -.
Ontologies
GO
GO:0031625; Molecular function: ubiquitin protein ligase binding (inferred from physical interaction from WormBase).
GO:0008340; Biological process: determination of adult life span (inferred from mutant phenotype from WormBase).
GO:0009792; Biological process: embryonic development ending in birth or egg hatching (inferred from mutant phenotype from WormBase).
GO:0040007; Biological process: growth (inferred from mutant phenotype from WormBase).
GO:0040035; Biological process: hermaphrodite genitalia development (inferred from mutant phenotype from WormBase).
GO:0040011; Biological process: locomotion (inferred from mutant phenotype from WormBase).
GO:0002119; Biological process: nematode larval development (inferred from mutant phenotype from WormBase).
QuickGo view.
Family and domain databases
InterPro IPR016135; UBQ-conjugat/RWD-like.
IPR000608; UBQ-conjugat_E2.
Graphical view of domain structure.
Gene3D G3DSA:3.10.110.10; UBQ-conjugat_E2; 1.
PANTHER PTHR11621; UBQ-conjugat_E2; 1.
Pfam PF00179; UQ_con; 1.
Pfam graphical view of domain structure.
ProDom PD000461; UBQ_conjugat; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00212; UBCc; 1.
SMART graphical view of domain structure.
PROSITE PS00183; UBIQUITIN_CONJUGAT_1; 1.
PS50127; UBIQUITIN_CONJUGAT_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P35129.
Genome annotation databases
Ensembl M7.1; Caenorhabditis elegans. [Contig view]
GeneID 178006; -.
KEGG cel:M7.1; -.
NMPDR fig|6239.3.peg.15092; -.
Other
ProtoNet P35129.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Complete proteome; Ligase; Ubl conjugation pathway.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
CHAIN   1   147  147     Ubiquitin-conjugating enzyme E2 2. PRO_0000082515
ACT_SITE   85    85        Glycyl thioester intermediate (By similarity). 
VARIANT   75    75  1     H -> Y (in let-70(S1132); which shows growth arrest in larval stage). 
Sequence information
Length: 147 AA [This is the length of the unprocessed precursor] Molecular weight: 16705 Da [This is the MW of the unprocessed precursor] CRC64: 9E91884D307F2120 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MALKRIQKEL QDLGRDPPAQ CSAGPVGDDL FHWQATIMGP PESPYQGGVF FLTIHFPTDY 

        70         80         90        100        110        120 
PFKPPKVAFT TRIYHPNINS NGSICLDILR SQWSPALTIS KVLLSICSLL CDPNPDDPLV 

       130        140 
PEIARIYKTD RERYNQLARE WTQKYAM 

P35129 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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