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UniProtKB/Swiss-Prot entry P31213


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name S5A2_HUMAN
Primary accession number P31213
Secondary accession numbers Q2M1R4 Q9BYE6
Integrated into Swiss-Prot on July 1, 1993
Sequence was last modified on July 1, 1993 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 85)
Name and origin of the protein
Protein name 3-oxo-5-alpha-steroid 4-dehydrogenase 2
Synonyms EC 1.3.99.5
Steroid 5-alpha-reductase 2
5 alpha-SR2
Type II 5-alpha reductase
SR type 2
Gene name
Name: SRD5A2
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1038/354159a0; PubMed=1944596 [NCBI, ExPASy, EBI, Israel, Japan]
Andersson S., Berman D.M., Jenkins E.P., Russell D.W.;
"Deletion of steroid 5 alpha-reductase 2 gene in male pseudohermaphroditism.";
Nature 354:159-161(1991).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1210/en.131.3.1571; PubMed=1505484 [NCBI, ExPASy, EBI, Israel, Japan]
Labrie F., Sugimoto Y., Luu-The V., Simard J., Lachance Y., Bachvarov D., Leblanc G., Durocher F., Paquet N.;
"Structure of human type II 5 alpha-reductase gene.";
Endocrinology 131:1571-1573(1992).
[3]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT LEU-89.
TISSUE=Liver tumor;
Schupp I.;
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS THR-49; LEU-89 AND VAL-113.
Livingston R.J., Rieder M.J., Chung M.-W., Downing T.K., Olson A.N., Nguyen C.P., Gildersleeve H., Cassidy C.M., Johnson E.J., Swanson J.E., McFarland I., Yool B., Park C., Nickerson D.A.;
"NIEHS-SNPs, environmental genome project, NIEHS ES15478, Department of Genome Sciences, Seattle, WA (URL: http://egp.gs.washington.edu).";
Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT LEU-89.
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-67.
TISSUE=Placenta;
Nakanishi J., Hibino T.;
"Transcription of type II 5 alpha-reductase is up-regulated by SRY in human dermal papilla cells.";
Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases.
[7]
VARIANT PPSH TRP-246.
PubMed=1522235 [NCBI, ExPASy, EBI, Israel, Japan]
Thigpen A.E., Davis D.L., Milatovich A., Mendonca B.B., Imperato-Mcginley J., Griffin J.E., Francke U., Wilson J.D., Russell D.W.;
"Molecular genetics of steroid 5 alpha-reductase 2 deficiency.";
J. Clin. Invest. 90:799-809(1992).
[8]
VARIANT PPSH MET-157 DEL.
PubMed=7554313 [NCBI, ExPASy, EBI, Israel, Japan]
Boudon C., Lobaccaro J.-M., Lumbroso S., Ogur G., Ocal G., Belon C., Sultan C.;
"A new deletion of the 5-alpha-reductase type 2 gene in a Turkish family with 5-alpha-reductase deficiency.";
Clin. Endocrinol. (Oxf.) 43:183-188(1995).
[9]
VARIANTS PPSH ASP-115; SER-183 AND TRP-246.
DOI=10.1210/jc.81.5.1730; PubMed=8626825 [NCBI, ExPASy, EBI, Israel, Japan]
Cai L.-Q., Zhu Y.-S., Katz M.D., Herrera C., Baez J., DeFillo-Ricart M., Shackleton C.H.L., Imperato-McGinley J.;
"5-alpha-reductase-2 gene mutations in the Dominican Republic.";
J. Clin. Endocrinol. Metab. 81:1730-1735(1996).
[10]
VARIANT PPSH GLN-55.
DOI=10.1210/jc.81.8.2821; PubMed=8768837 [NCBI, ExPASy, EBI, Israel, Japan]
Hochberg Z., Chayen R., Reiss N., Falik Z., Makler A., Munichor M., Farkas A., Goldfarb H., Ohana N., Hiort O.;
"Clinical, biochemical, and genetic findings in a large pedigree of male and female patients with 5-alpha-reductase 2 deficiency.";
J. Clin. Endocrinol. Metab. 81:2821-2827(1996).
[11]
VARIANT PPSH LYS-200.
PubMed=9208814 [NCBI, ExPASy, EBI, Israel, Japan]
Anwar R., Gilbey S.G., New J.P., Markham A.F.;
"Male pseudohermaphroditism resulting from a novel mutation in the human steroid 5 alpha-reductase type 2 gene (SRD5A2).";
Mol. Pathol. 50:51-52(1997).
[12]
VARIANT PPSH THR-228.
DOI=10.1002/(SICI)1096-8628(19981116)80:3<269::AID-AJMG18>3.3.CO;2-K; PubMed=9843052 [NCBI, ExPASy, EBI, Israel, Japan]
Nordenskjold A., Magnus O., Aagenaes O., Knudtzon J.;
"Homozygous mutation (A228T) in the 5-alpha-reductase type 2 gene in a boy with 5-alpha-reductase deficiency: genotype-phenotype correlations.";
Am. J. Med. Genet. 80:269-272(1998).
[13]
VARIANTS PPSH SER-196 AND ARG-231.
DOI=10.1210/jc.83.9.3236; PubMed=9745434 [NCBI, ExPASy, EBI, Israel, Japan]
Nordenskjold A., Ivarsson S.-A.;
"Molecular characterization of 5-alpha-reductase type 2 deficiency and fertility in a Swedish family.";
J. Clin. Endocrinol. Metab. 83:3236-3238(1998).
[14]
VARIANT THR-49.
DOI=10.1016/S0140-6736(98)11282-5; PubMed=10501358 [NCBI, ExPASy, EBI, Israel, Japan]
Makridakis N.M., Ross R.K., Pike M.C., Crocitto L.E., Kolonel L.N., Pearce C.L., Henderson B.E., Reichardt J.K.V.;
"Association of mis-sense substitution in SRD5A2 gene with prostate cancer in African-American and Hispanic men in Los Angeles, USA.";
Lancet 354:975-978(1999).
[15]
VARIANTS PPSH ASP-85; ASP-115; ARG-212; TYR-245 AND GLN-246.
PubMed=10718838 [NCBI, ExPASy, EBI, Israel, Japan]
Vilchis F., Mendez J.P., Canto P., Lieberman E., Chavez B.;
"Identification of missense mutations in the SRD5A2 gene from patients with steroid 5alpha-reductase 2 deficiency.";
Clin. Endocrinol. (Oxf.) 52:383-387(2000).
[16]
VARIANTS PPSH ASP-197 AND ARG-212.
DOI=10.1210/jc.85.9.3147; PubMed=10999800 [NCBI, ExPASy, EBI, Israel, Japan]
Chavez B., Valdez E., Vilchis F.;
"Uniparental disomy in steroid 5-alpha-reductase 2 deficiency.";
J. Clin. Endocrinol. Metab. 85:3147-3150(2000).
[17]
VARIANT LEU-89.
PubMed=11927504 [NCBI, ExPASy, EBI, Israel, Japan]
Pearce C.L., Makridakis N.M., Ross R.K., Pike M.C., Kolonel L.N., Henderson B.E., Reichardt J.K.V.;
"Steroid 5-alpha reductase type II V89L substitution is not associated with risk of prostate cancer in a multiethnic population study.";
Cancer Epidemiol. Biomarkers Prev. 11:417-418(2002).
[18]
VARIANT MICROPENIS GLN-227, AND VARIANT LEU-89.
DOI=10.1210/jc.2002-021415; PubMed=12843198 [NCBI, ExPASy, EBI, Israel, Japan]
Sasaki G., Ogata T., Ishii T., Kosaki K., Sato S., Homma K., Takahashi T., Hasegawa T., Matsuo N.;
"Micropenis and the 5alpha-reductase-2 (SRD5A2) gene: mutation and V89L polymorphism analysis in 81 Japanese patients.";
J. Clin. Endocrinol. Metab. 88:3431-3436(2003).
[19]
VARIANT THR-49, AND LACK OF ASSOCIATION WITH PROSTATE CANCER.
DOI=10.1038/sj.ejhg.5201101; PubMed=14560315 [NCBI, ExPASy, EBI, Israel, Japan]
Loukola A., Chadha M., Penn S.G., Rank D., Conti D.V., Thompson D., Cicek M., Love B., Bivolarevic V., Yang Q., Jiang Y., Hanzel D.K., Dains K., Paris P.L., Casey G., Witte J.S.;
"Comprehensive evaluation of the association between prostate cancer and genotypes/haplotypes in CYP17A1, CYP3A4, and SRD5A2.";
Eur. J. Hum. Genet. 12:321-332(2004).
[20]
VARIANTS PPSH ASP-115 AND TRP-246.
DOI=10.1159/000081893; PubMed=15528927 [NCBI, ExPASy, EBI, Israel, Japan]
Fernandez-Cancio M., Rodo J., Andaluz P., Martinez de Osaba M.J., Rodriguez-Hierro F., Esteban C., Carrascosa A., Audi L.;
"Clinical, biochemical and morphologic diagnostic markers in an infant male pseudohermaphrodite patient with compound heterozygous mutations (G115D/R246W) in SRD5A2 gene.";
Horm. Res. 62:259-264(2004).
[21]
VARIANTS PPSH TRP-145; LEU-181; SER-196; PHE-235 AND GLN-246, AND VARIANTS THR-49 AND LEU-89.
DOI=10.1111/j.1365-2265.2005.02348.x; PubMed=16181229 [NCBI, ExPASy, EBI, Israel, Japan]
Nicoletti A., Baldazzi L., Balsamo A., Barp L., Pirazzoli P., Gennari M., Radetti G., Cacciari E., Cicognani A.;
"SRD5A2 gene analysis in an Italian population of under-masculinized 46,XY subjects.";
Clin. Endocrinol. (Oxf.) 63:375-380(2005).
[22]
VARIANTS PPSH ARG-126; ARG-158; SER-183; SER-196; ASP-207 AND TRP-246, AND VARIANTS THR-49 AND LEU-89.
DOI=10.1007/s00109-005-0651-7; PubMed=15770495 [NCBI, ExPASy, EBI, Israel, Japan]
Hackel C., Oliveira L.E., Ferraz L.F., Tonini M.M., Silva D.N., Toralles M.B., Stuchi-Perez E.G., Guerra-Junior G.;
"New mutations, hotspots, and founder effects in Brazilian patients with steroid 5alpha-reductase deficiency type 2.";
J. Mol. Med. 83:569-576(2005).
[23]
VARIANT PPSH ARG-123.
DOI=10.1016/j.urology.2005.02.021; PubMed=16098368 [NCBI, ExPASy, EBI, Israel, Japan]
Bahceci M., Ersay A.R., Tuzcu A., Hiort O., Richter-Unruh A., Gokalp D.;
"A novel missense mutation of 5-alpha reductase type 2 gene (SRD5A2) leads to severe male pseudohermaphroditism in a Turkish family.";
Urology 66:407-410(2005).
Comments
  • FUNCTION: Converts testosterone (T) into 5-alpha-dihydrotestosterone (DHT) and progesterone or corticosterone into their corresponding 5-alpha-3-oxosteroids. It plays a central role in sexual differentiation and androgen physiology.
  • CATALYTIC ACTIVITY: A 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-Delta4-steroid + reduced acceptor.
  • BIOPHYSICOCHEMICAL PROPERTIES:
    pH dependence:   Optimally active at acidic pHs;
  • SUBCELLULAR LOCATION: Microsome membrane; Multi-pass membrane protein. Endoplasmic reticulum membrane; Multi-pass membrane protein (Potential).
  • TISSUE SPECIFICITY: Expressed in high levels in the prostate and many other androgen-sensitive tissues.
  • POLYMORPHISM: Individuals with Thr-49 have an increased risk of prostate cancer. The enzyme with Thr-49 has a higher in vitro V(max) than the Ala-49 enzyme.
  • DISEASE: Defects in SRD5A2 are the cause of pseudovaginal perineoscrotal hypospadias (PPSH) [MIM:264600]; also known as male pseudohermaphroditism due to 5-alpha-reductase deficiency or 5-ARD deficiency. PPSH is a rare form of male pseudohermaphroditism in which affected males develop normal internal urogenital tracts but fail to develop external male structures. Individuals with PPSH have testicles and tend to have a vagina and labia, but with a small penis capable of ejaculation instead of a clitoris (this penis, however, appears to be a clitoris at birth). These individuals are normally raised as girls. However at puberty their testes will descend, their voice will deepen and they often will develop a male sexual identity. They develop only limited facial hair and will not experience male-pattern baldness. Jeffrey Eugenides won a Pulitzer prize for his 2003 novel 'Middlesex' which describes the life an individual with such a deficiency.
  • SIMILARITY: Belongs to the steroid 5-alpha reductase family.
  • WEB RESOURCE: Name=GeneReviews; URL="http://www.genetests.org/query?gene=SRD5A2";.
  • WEB RESOURCE: Name=Wikipedia; Note=5-alpha reductase entry; URL="http://en.wikipedia.org/wiki/5_alpha_reductase";.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M74047; AAA60586.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB047857; BAB40419.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EF560740; ABQ59050.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY884245; AAW56942.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC112252; AAI12253.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC113641; AAI13642.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L03843; -; NOT_ANNOTATED_CDS; Genomic_DNA.[EMBL / GenBank / DDBJ]
PIR A49169; A49169.
RefSeq NP_000339.2; -.
UniGene Hs.458345
3D structure databases
ModBase P31213.
Polymorphism databases
NIEHS-SNPs SRD5A2.
Organism-specific databases
H-InvDB HIX0030017; -.
HGNC HGNC:11285; SRD5A2.
GenAtlas SRD5A2.
MIM 264600; phenotype. [NCBI / EBI]
607306; gene. [NCBI / EBI]
Orphanet 753; Disorder of sexual developement 46,XY due to 5-alpha-reductase 2 deficiency.
PharmGKB PA36113; -.
GeneCards P31213.
Gene expression databases
ArrayExpress P31213; -.
CleanEx HS_SRD5A2; -.
GermOnline ENSG00000049319; Homo sapiens.
Ontologies
GO
GO:0005789; Cellular component: endoplasmic reticulum membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from InterPro).
GO:0005792; Cellular component: microsome (inferred from electronic annotation from UniProtKB-KW).
GO:0003865; Molecular function: 3-oxo-5-alpha-steroid 4-dehydrogenase activity (inferred from electronic annotation from InterPro).
GO:0009917; Molecular function: sterol 5-alpha reductase activity (inferred from direct assay from UniProtKB).
GO:0030154; Biological process: cell differentiation (inferred from electronic annotation from UniProtKB-KW).
GO:0007267; Biological process: cell-cell signaling (traceable author statement from UniProtKB).
GO:0008584; Biological process: male gonad development (inferred from mutant phenotype from UniProtKB).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0007530; Biological process: sex determination (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR016636; 3-oxo-5-alpha-steroid_4-DH.
IPR001104; 3-oxo-5_a-steroid_4-DHase_C.
Graphical view of domain structure.
Pfam PF02544; Steroid_dh; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF015596; 5_alpha-SR2; 1.
PROSITE PS50244; S5A_REDUCTASE; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P31213.
ProtoNet P31213.
Genome annotation databases
Ensembl ENSG00000049319; Homo sapiens. [Contig view]
GeneID 6716; -.
KEGG hsa:6716; -.
Phylogenomic databases
HOGENOM P31213; -.
HOVERGEN P31213; -.
Other
DrugBank DB00548; Azelaic Acid.
DB01126; Dutasteride.
LinkHub P31213; -.
NextBio 26196; -.
SOURCE SRD5A2; Homo sapiens.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Differentiation; Disease mutation; Endoplasmic reticulum; Membrane; Microsome; Oxidoreductase; Polymorphism; Pseudohermaphroditism; Sexual differentiation; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   254  254     3-oxo-5-alpha-steroid 4-dehydrogenase 2. PRO_0000213676
TRANSMEM   8    28  21     Potential. 
TRANSMEM   72    92  21     Potential. 
TRANSMEM   146   166  21     Potential. 
TRANSMEM   206   226  21     Potential. 
VARIANT   49    49  1     A -> T. VAR_013104 
VARIANT   55    55  1     L -> Q (in PPSH). VAR_013105 
VARIANT   85    85  1     G -> D (in PPSH). VAR_013130 
VARIANT   89    89  1     V -> L (in dbSNP:rs523349 [NCBI]). VAR_013131 
VARIANT   113   113  1     L -> V. VAR_022302 
VARIANT   115   115  1     G -> D (in PPSH). VAR_013106 
VARIANT   123   123  1     G -> R (in PPSH). VAR_025854 
VARIANT   126   126  1     Q -> R (in PPSH). VAR_025855 
VARIANT   145   145  1     R -> W (in PPSH). VAR_025851 
VARIANT   157   157  1     Missing (in PPSH). VAR_013107
VARIANT   158   158  1     G -> R (in PPSH). VAR_025856 
VARIANT   181   181  1     P -> L (in PPSH). VAR_025852 
VARIANT   183   183  1     G -> S (in PPSH). VAR_013108 
VARIANT   196   196  1     G -> S (in PPSH). VAR_013109 
VARIANT   197   197  1     E -> D (in PPSH). VAR_013110 
VARIANT   200   200  1     E -> K (in PPSH). VAR_013132 
VARIANT   207   207  1     A -> D (in PPSH). VAR_025857 
VARIANT   212   212  1     P -> R (in PPSH). VAR_013111 
VARIANT   224   224  1     L -> M (in dbSNP:rs9332963 [NCBI]). VAR_037585 
VARIANT   227   227  1     R -> Q (in micropenis). VAR_037586 
VARIANT   228   228  1     A -> T (in PPSH). VAR_013112 
VARIANT   231   231  1     H -> R (in PPSH). VAR_013113 
VARIANT   235   235  1     Y -> F (in PPSH). VAR_025853 
VARIANT   245   245  1     S -> Y (in PPSH). VAR_013133 
VARIANT   246   246  1     R -> Q (in PPSH). VAR_013134 
VARIANT   246   246  1     R -> W (in PPSH). VAR_005609 
Sequence information
Length: 254 AA [This is the length of the unprocessed precursor] Molecular weight: 28393 Da [This is the MW of the unprocessed precursor] CRC64: E65A19C8600DED05 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MQVQCQQSPV LAGSATLVAL GALALYVAKP SGYGKHTESL KPAATRLPAR AAWFLQELPS 

        70         80         90        100        110        120 
FAVPAGILAR QPLSLFGPPG TVLLGLFCVH YFHRTFVYSL LNRGRPYPAI LILRGTAFCT 

       130        140        150        160        170        180 
GNGVLQGYYL IYCAEYPDGW YTDIRFSLGV FLFILGMGIN IHSDYILRQL RKPGEISYRI 

       190        200        210        220        230        240 
PQGGLFTYVS GANFLGEIIE WIGYALATWS LPALAFAFFS LCFLGLRAFH HHRFYLKMFE 

       250 
DYPKSRKALI PFIF 

P31213 in FASTA format

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