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UniProtKB/Swiss-Prot entry P29788


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name VTNC_MOUSE
Primary accession number P29788
Secondary accession number Q8VII4
Integrated into Swiss-Prot on April 1, 1993
Sequence was last modified on October 1, 1996 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 91)
Name and origin of the protein
Protein name Vitronectin [Precursor]
Synonyms Serum-spreading factor
S-protein
Gene name
Name: Vtn
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=BALB/c;
TISSUE=Liver;
DOI=10.1016/0378-1119(93)90113-H; PubMed=7505250 [NCBI, ExPASy, EBI, Israel, Japan]
Seiffert D., Poenninger J., Binder B.R.;
"Organization of the gene encoding mouse vitronectin.";
Gene 134:303-304(1993).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Liver;
PubMed=1719529 [NCBI, ExPASy, EBI, Israel, Japan]
Seiffert D., Keeton M., Eguchi Y., Sawdey M., Loskutoff D.J.;
"Detection of vitronectin mRNA in tissues and cells of the mouse.";
Proc. Natl. Acad. Sci. U.S.A. 88:9402-9406(1991).
[3]
NUCLEOTIDE SEQUENCE.
STRAIN=BALB/c;
TISSUE=Liver;
Ehrlich H.J., Richter B., von der Ahe D., Preissner K.T.;
"Primary structure of vitronectins and homology with other proteins.";
(In) Preissner K.T., Rosenblatt S., Kost C., Wegerhoff J., Mosher D.F. (eds.); Biology of vitronectins, pp.1-1, Elsevier, Amsterdam (1996).
[4]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=BALB/c;
TISSUE=Liver;
Lai D.-Z.;
"Construction of a robust CHO cell-line for biopharmaceutical production.";
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Retina;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
PROTEIN SEQUENCE OF 20-44.
DOI=10.1016/0167-4838(92)90417-C; PubMed=1372829 [NCBI, ExPASy, EBI, Israel, Japan]
Nakashima N., Miyazaki K., Ishikawa M., Yatohgo T., Ogawa H., Uchibori H., Matsumoto I., Seno N., Hayashi M.;
"Vitronectin diversity in evolution but uniformity in ligand binding and size of the core polypeptide.";
Biochim. Biophys. Acta 1120:1-10(1992).
[7]
GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-241, AND MASS SPECTROMETRY.
TISSUE=Plasma;
DOI=10.1021/pr0604559; PubMed=17330941 [NCBI, ExPASy, EBI, Israel, Japan]
Bernhard O.K., Kapp E.A., Simpson R.J.;
"Enhanced analysis of the mouse plasma proteome using cysteine-containing tryptic glycopeptides.";
J. Proteome Res. 6:987-995(2007).
Comments
  • FUNCTION: Vitronectin is a cell adhesion and spreading factor found in serum and tissues. Vitronectin interact with glycosaminoglycans and proteoglycans. Is recognized by certain members of the integrin family and serves as a cell-to-substrate adhesion molecule. Inhibitor of the membrane-damaging effect of the terminal cytolytic complement pathway.
  • SUBUNIT: Interacts with SERPINE1/PAI1 and insulin (By similarity).
  • SUBCELLULAR LOCATION: Secreted, extracellular space.
  • TISSUE SPECIFICITY: Plasma.
  • DOMAIN: The SMB domain mediates interaction with SERPINE1/PAI1. The heparin-binding domain mediates interaction with insulin (By similarity).
  • PTM: Sulfated on 2 tyrosine residues (By similarity).
  • PTM: N- and O-glycosylated (By similarity).
  • PTM: It has been suggested that the active SMB domain may be permitted considerable disulfide bond heterogeneity or variability, thus two alternate disulfide patterns based on 3D structures are described with 1 disulfide bond conserved in both.
  • SIMILARITY: Contains 4 hemopexin-like domains.
  • SIMILARITY: Contains 1 SMB (somatomedin-B) domain.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X72091; CAA50981.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M77123; AAA40558.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X63003; CAA44732.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF440693; AAL34534.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC018521; AAH18521.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S19894; SGMSV.
RefSeq NP_035837.1; -.
UniGene Mm.3667
3D structure databases
HSSP P04004; 1OC0. [HSSP ENTRY / PDB]
SMR P29788; 20-70.
ModBase P29788.
PTM databases
PhosphoSite P29788; -.
Organism-specific databases
MGI MGI:98940; Vtn.
Gene expression databases
ArrayExpress P29788; -.
CleanEx MM_VTN; -.
GermOnline ENSMUSG00000017344; Mus musculus.
Ontologies
GO
GO:0005578; Cellular component: proteinaceous extracellular matrix (inferred from direct assay from MGI).
GO:0003824; Molecular function: catalytic activity (inferred from electronic annotation from InterPro).
GO:0008201; Molecular function: heparin binding (inferred from electronic annotation from UniProtKB-KW).
GO:0046872; Molecular function: metal ion binding (inferred from electronic annotation from InterPro).
GO:0005515; Molecular function: protein binding (inferred from electronic annotation from UniProtKB-KW).
GO:0007160; Biological process: cell-matrix adhesion (inferred from direct assay from MGI).
QuickGo view.
Family and domain databases
InterPro IPR000585; Hemopexin.
IPR001212; Somatomedin_B.
Graphical view of domain structure.
Gene3D G3DSA:2.110.10.10; Hemopexin; 2.
Pfam PF00045; Hemopexin; 4.
PF01033; Somatomedin_B; 1.
Pfam graphical view of domain structure.
PRINTS PR00022; SOMATOMEDINB.
SMART SM00120; HX; 4.
SM00201; SO; 1.
SMART graphical view of domain structure.
PROSITE PS00024; HEMOPEXIN; 2.
PS00524; SMB_1; 1.
PS50958; SMB_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P29788.
ProtoNet P29788.
Genome annotation databases
Ensembl ENSMUSG00000017344; Mus musculus. [Contig view]
GeneID 22370; -.
KEGG mmu:22370; -.
Phylogenomic databases
HOGENOM P29788; -.
HOVERGEN P29788; -.
Other
NextBio 302703; -.
SOURCE Vtn; Mus musculus.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cell adhesion; Direct protein sequencing; Glycoprotein; Heparin-binding; Phosphoprotein; Repeat; Secreted; Signal; Sulfation.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    19  19      
CHAIN   20   478  459     Vitronectin. PRO_0000036398
DOMAIN   20    63  44     SMB. 
DOMAIN   160   203  44     Hemopexin-like 1. 
DOMAIN   205   251  47     Hemopexin-like 2. 
DOMAIN   253   303  51     Hemopexin-like 3. 
DOMAIN   426   473  48     Hemopexin-like 4. 
REGION   366   399  34     Heparin-binding (By similarity). 
MOTIF   64    66  3     Cell attachment site. 
MOD_RES   75    75        Sulfotyrosine (Potential). 
MOD_RES   78    78        Sulfotyrosine (Potential). 
MOD_RES   80    80        Sulfotyrosine (Potential). 
MOD_RES   170   170        Phosphoserine (By similarity). 
MOD_RES   278   278        Sulfotyrosine (Potential). 
MOD_RES   281   281        Sulfotyrosine (Potential). 
MOD_RES   311   311        Phosphoserine (By similarity). 
MOD_RES   398   398        Phosphoserine; by PKA (By similarity). 
MOD_RES   416   416        Sulfotyrosine (Potential). 
MOD_RES   419   419        Sulfotyrosine (Potential). 
MOD_RES   421   421        Sulfotyrosine (Potential). 
CARBOHYD   86    86        N-linked (GlcNAc...) (Potential). 
CARBOHYD   168   168        N-linked (GlcNAc...) (Potential). 
CARBOHYD   241   241        N-linked (GlcNAc...). 
DISULFID   24    40        Alternate (By similarity). 
DISULFID   24    28        Alternate (By similarity). 
DISULFID   28    58        Alternate (By similarity). 
DISULFID   38    51        Alternate (By similarity). 
DISULFID   38    40        Alternate (By similarity). 
DISULFID   44    50        By similarity. 
DISULFID   51    58        Alternate (By similarity). 
DISULFID   292   431        By similarity. 
CONFLICT   179   180        CY -> RC (in Ref. 4; AAL34534). 
CONFLICT   281   281        Y -> H (in Ref. 4; AAL34534). 
CONFLICT   369   369        K -> P (in Ref. 4; AAL34534). 
CONFLICT   383   384        Missing (in Ref. 2; AAA40558). 
CONFLICT   416   416        Y -> K (in Ref. 2; AAA40558). 
Sequence information
Length: 478 AA [This is the length of the unprocessed precursor] Molecular weight: 54849 Da [This is the MW of the unprocessed precursor] CRC64: EB0C772F8BD6A166 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAPLRPFFIL ALVAWVSLAD QESCKGRCTQ GFMASKKCQC DELCTYYQSC CADYMEQCKP 

        70         80         90        100        110        120 
QVTRGDVFTM PEDDYWSYDY VEEPKNNTNT GVQPENTSPP GDLNPRTDGT LKPTAFLDPE 

       130        140        150        160        170        180 
EQPSTPAPKV EQQEEILRPD TTDQGTPEFP EEELCSGKPF DAFTDLKNGS LFAFRGQYCY 

       190        200        210        220        230        240 
ELDETAVRPG YPKLIQDVWG IEGPIDAAFT RINCQGKTYL FKGSQYWRFE DGVLDPGYPR 

       250        260        270        280        290        300 
NISEGFSGIP DNVDAAFALP AHRYSGRERV YFFKGKQYWE YEFQQQPSQE ECEGSSLSAV 

       310        320        330        340        350        360 
FEHFALLQRD SWENIFELLF WGRSSDGARE PQFISRNWHG VPGKVDAAMA GRIYVTGSLS 

       370        380        390        400        410        420 
HSAQAKKQKS KRRSRKRYRS RRGRGHRRSQ SSNSRRSSRS IWFSLFSSEE SGLGTYNNYD 

       430        440        450        460        470 
YDMDWLVPAT CEPIQSVYFF SGDKYYRVNL RTRRVDSVNP PYPRSIAQYW LGCPTSEK 

P29788 in FASTA format

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