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UniProtKB/Swiss-Prot entry P28891


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name FIBR_AGKCO
Primary accession number P28891
Secondary accession numbers None
Integrated into Swiss-Prot on December 1, 1992
Sequence was last modified on February 1, 1994 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 59)
Name and origin of the protein
Protein name Zinc metalloproteinase fibrolase
Synonyms EC 3.4.24.72
Fibrinolytic proteinase
Alfimeprase
Gene name None
From
Agkistrodon contortrix contortrix (Southern copperhead) [TaxID: 8713] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Scleroglossa; Serpentes; Colubroidea; Viperidae; Crotalinae; Agkistrodon.
Protein existence 1: Evidence at protein level;
References
[1]
PROTEIN SEQUENCE, AND VARIANTS.
TISSUE=Venom;
PubMed=1304358 [NCBI, ExPASy, EBI, Israel, Japan]
Randolph A., Chamberlain S.H., Chu H.L.C., Retzios A.D., Markland F.S. Jr., Masiarz F.R.;
"Amino acid sequence of fibrolase, a direct-acting fibrinolytic enzyme from Agkistrodon contortrix contortrix venom.";
Protein Sci. 1:590-600(1992).
[2]
DISULFIDE BONDS.
DOI=10.1110/ps.110101; PubMed=11369866 [NCBI, ExPASy, EBI, Israel, Japan]
Jones G., Ronk M., Mori F., Zhang Z.;
"Disulfide structure of alfimeprase: a recombinant analog of fibrolase.";
Protein Sci. 10:1264-1267(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
3D structure databases
HSSP P34179; 4AIG. [HSSP ENTRY / PDB]
ModBase P28891.
Protein family/group databases
MEROPS M12.133; -.
Ontologies
GO
GO:0005576; Cellular component: extracellular region (inferred from electronic annotation from UniProtKB-KW).
GO:0004222; Molecular function: metalloendopeptidase activity (inferred from electronic annotation from InterPro).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from InterPro).
GO:0009405; Biological process: pathogenesis (inferred from electronic annotation from UniProtKB-KW).
GO:0006508; Biological process: proteolysis (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR006025; Pept_M_Zn_BS.
IPR001590; Peptidase_M12B.
Graphical view of domain structure.
Pfam PF01421; Reprolysin; 1.
Pfam graphical view of domain structure.
PROSITE PS50215; ADAM_MEPRO; 1.
PS00142; ZINC_PROTEASE; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P28891.
ProtoNet P28891.
Phylogenomic databases
HOVERGEN P28891; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Direct protein sequencing; Hydrolase; Metal-binding; Metalloprotease; Pharmaceutical; Protease; Pyrrolidone carboxylic acid; Secreted; Toxin; Zinc.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   203  203     Zinc metalloproteinase fibrolase. PRO_0000078197
DOMAIN   7   203  197     Peptidase M12B. 
ACT_SITE   144   144        By similarity. 
METAL   143   143        Zinc; catalytic (Probable). 
METAL   147   147        Zinc; catalytic (Probable). 
METAL   153   153        Zinc; catalytic (Probable). 
MOD_RES   1     1        Pyrrolidone carboxylic acid. 
DISULFID   118   198         
DISULFID   158   182         
DISULFID   160   165         
VARIANT   1     1  1     Missing (in some of the chains). 
VARIANT   189   189  1     T -> E. 
VARIANT   192   192  1     T -> L. 
Sequence information
Length: 203 AA [This is the length of the unprocessed precursor] Molecular weight: 22908 Da [This is the MW of the unprocessed precursor] CRC64: 646EBE6F7F1EA191 [This is a checksum on the sequence]
        10         20         30         40         50         60 
QQRFPQRYVQ LVIVADHRMN TKYNGDSDKI RQWVHQIVNT INEIYRPLNI QFTLVGLEIW 

        70         80         90        100        110        120 
SNQDLITVTS VSHDTLASFG NWRETDLLRR QRHDNAQLLT AIDFDGDTVG LAYVGGMCQL 

       130        140        150        160        170        180 
KHSTGVIQDH SAINLLVALT MAHELGHNLG MNHDGNQCHC GANSCVMAAM LSDQPSKLFS 

       190        200 
DCSKKDYQTF LTVNNPQCIL NKP 

P28891 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

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