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UniProtKB/Swiss-Prot entry P28863


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name MMP3_RABIT
Primary accession number P28863
Secondary accession numbers None
Integrated into Swiss-Prot on December 1, 1992
Sequence was last modified on December 1, 1992 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 71)
Name and origin of the protein
Protein name Stromelysin-1 [Precursor]
Synonyms SL-1
EC 3.4.24.17
Matrix metalloproteinase-3
MMP-3
Transin-1
Gene name
Name: MMP3
From
Oryctolagus cuniculus (Rabbit) [TaxID: 9986] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=2825726 [NCBI, ExPASy, EBI, Israel, Japan]
Fini M.E., Karmilowicz M.J., Ruby P.L., Beeman A.M., Borges K.A., Brinckerhoff C.E.;
"Cloning of a complementary DNA for rabbit proactivator. A metalloproteinase that activates synovial cell collagenase, shares homology with stromelysin and transin, and is coordinately regulated with collagenase.";
Arthritis Rheum. 30:1254-1264(1987).
[2]
NUCLEOTIDE SEQUENCE [MRNA] OF 1-167.
PubMed=3030290 [NCBI, ExPASy, EBI, Israel, Japan]
Whitham S.E., Murphy G., Angel P., Rahmsdorf H.J., Smith B., Lyons A., Harris T.J.R., Reynolds J.J., Herrlich P., Docherty A.J.P.;
"Comparison of human stromelysin and collagenase by cloning and sequence analysis.";
Biochem. J. 240:913-916(1986).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M25664; AAA31467.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A37306; KCRBS1.
RefSeq NP_001075749.1; -.
UniGene Ocu.1964
3D structure databases
HSSP P08254; 1G05. [HSSP ENTRY / PDB]
ModBase P28863.
Protein family/group databases
MEROPS M10.005; -.
Family and domain databases
InterPro IPR000585; Hemopexin.
IPR001818; Pept_M10A_M12B.
IPR016293; Pept_M10A_matrix.
IPR006025; Pept_M_Zn_BS.
IPR006026; Peptidase_M.
IPR002477; Peptidoglycan-bd-like.
Graphical view of domain structure.
Gene3D G3DSA:2.110.10.10; Hemopexin; 1.
Pfam PF00045; Hemopexin; 4.
PF00413; Peptidase_M10; 1.
PF01471; PG_binding_1; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001191; Peptidase_M10A_matrix; 1.
PRINTS PR00138; MATRIXIN.
SMART SM00120; HX; 4.
SM00235; ZnMc; 1.
SMART graphical view of domain structure.
PROSITE PS00546; CYSTEINE_SWITCH; 1.
PS00024; HEMOPEXIN; 1.
PS00142; ZINC_PROTEASE; 1.
BLOCKS P28863.
Genome annotation databases
Ensembl ENSOCUG00000015230; Oryctolagus cuniculus. [Contig view]
GeneID 100009111; -.
Phylogenomic databases
HOVERGEN P28863; -.
Other
ProtoNet P28863.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Collagen degradation; Extracellular matrix; Glycoprotein; Hydrolase; Metal-binding; Metalloprotease; Protease; Repeat; Secreted; Signal; Zinc; Zymogen.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    17  17     Probable. 
PROPEP   18   100  83     Activation peptide. PRO_0000028732
CHAIN   101   478  378     Stromelysin-1. PRO_0000028733
DOMAIN   297   339  43     Hemopexin-like 1. 
DOMAIN   341   384  44     Hemopexin-like 2. 
DOMAIN   389   436  48     Hemopexin-like 3. 
DOMAIN   438   478  41     Hemopexin-like 4. 
MOTIF   91    98  8     Cysteine switch (By similarity). 
ACT_SITE   220   220        By similarity. 
METAL   93    93        Zinc 2; in inhibited form (By similarity). 
METAL   125   125        Calcium 1 (By similarity). 
METAL   159   159        Calcium 2 (By similarity). 
METAL   169   169        Zinc 1 (By similarity). 
METAL   171   171        Zinc 1 (By similarity). 
METAL   176   176        Calcium 3 (By similarity). 
METAL   177   177        Calcium 3; via carbonyl oxygen (By similarity). 
METAL   179   179        Calcium 3; via carbonyl oxygen (By similarity). 
METAL   181   181        Calcium 3; via carbonyl oxygen (By similarity). 
METAL   184   184        Zinc 1 (By similarity). 
METAL   191   191        Calcium 2; via carbonyl oxygen (By similarity). 
METAL   193   193        Calcium 2; via carbonyl oxygen (By similarity). 
METAL   195   195        Calcium 2 (By similarity). 
METAL   197   197        Zinc 1 (By similarity). 
METAL   199   199        Calcium 3 (By similarity). 
METAL   200   200        Calcium 1 (By similarity). 
METAL   202   202        Calcium 1 (By similarity). 
METAL   202   202        Calcium 3 (By similarity). 
METAL   219   219        Zinc 2; catalytic (By similarity). 
METAL   223   223        Zinc 2; catalytic (By similarity). 
METAL   229   229        Zinc 2; catalytic (By similarity). 
METAL   298   298        Calcium 4; via carbonyl oxygen (By similarity). 
METAL   390   390        Calcium 4; via carbonyl oxygen (By similarity). 
METAL   439   439        Calcium 4; via carbonyl oxygen (By similarity). 
CARBOHYD   121   121        N-linked (GlcNAc...) (Potential). 
DISULFID   291   478        By similarity. 
CONFLICT   83    83        N -> D (in Ref. 2). 
CONFLICT   128   128        R -> K (in Ref. 2). 
Sequence information
Length: 478 AA [This is the length of the unprocessed precursor] Molecular weight: 53942 Da [This is the MW of the unprocessed precursor] CRC64: CA742E31A4549D40 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MKTLPTLLLL CVALCSAYPL DGASRDADTT NMDLLQQYLE NYYNLEKDVK QFVKRKDSSP 

        70         80         90        100        110        120 
VVKKIQEMQK FLGLEVTGKL DSNTLEVIRK PRCGVPDVGH FSTFPGTPKW TKTHLTYRIV 

       130        140        150        160        170        180 
NYTPDLPRDA VDAAIEKALK VWEEVTPLTF SRKYEGEADI MISFGVREHG DFIPFDGPGN 

       190        200        210        220        230        240 
VLAHAYAPGP GINGDAHFDD DEQWTKDTTG TNLFLVAAHE LGHSLGLFHS ANPEALMYPV 

       250        260        270        280        290        300 
YNAFTDLARF RLSQDDVDGI QSLYGPAPAS PDNSGVPMEP VPPGSGTPVM CDPDLSFDAI 

       310        320        330        340        350        360 
STLRGEILFF KDRYFWRKSL RILEPEFHLI SSFWPSLPSA VDAAYEVISR DTVFIFKGTQ 

       370        380        390        400        410        420 
FWAIRGNEVQ AGYPRSIHTL GFPSTIRKID AAISDKERKK TYFFVEDKYW RFDEKRQSLE 

       430        440        450        460        470 
PGFPRHIAED FPGINPKIDA VFEAFGFFYF FSGSSQSEFD PNAKKVTHVL KSNSWFQC 

P28863 in FASTA format

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