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UniProtKB/Swiss-Prot entry P28862


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name MMP3_MOUSE
Primary accession number P28862
Secondary accession numbers None
Integrated into Swiss-Prot on December 1, 1992
Sequence was last modified on February 1, 1994 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 86)
Name and origin of the protein
Protein name Stromelysin-1 [Precursor]
Synonyms SL-1
EC 3.4.24.17
Matrix metalloproteinase-3
MMP-3
Transin-1
EMS-2
Gene name
Name: Mmp3
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=NMRI;
TISSUE=Calvaria;
DOI=10.1016/0378-1119(92)90116-7; PubMed=1398148 [NCBI, ExPASy, EBI, Israel, Japan]
Hammani K., Henriet P., Eeckhout Y.;
"Cloning and sequencing of a cDNA encoding mouse stromelysin 1.";
Gene 120:321-322(1992).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Swiss;
Li F., Strange R., Saurer S., Niemann H., Friis R.R.;
Submitted (AUG-1991) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [MRNA] OF 415-469, AND DEVELOPMENTAL STAGE.
PubMed=2744464 [NCBI, ExPASy, EBI, Israel, Japan]
Brenner C.A., Adler R.R., Rappolee D.A., Pedersen R.A., Werb Z.;
"Genes for extracellular-matrix-degrading metalloproteinases and their inhibitor, TIMP, are expressed during early mammalian development.";
Genes Dev. 3:848-859(1989).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X66402; CAA47029.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X63162; CAA44860.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR JC1476; KCMSS1.
RefSeq NP_034939.1; -.
UniGene Mm.4993
3D structure databases
HSSP P08254; 1G05. [HSSP ENTRY / PDB]
ModBase P28862.
Protein family/group databases
MEROPS M10.011; -.
PTM databases
PhosphoSite P28862; -.
Organism-specific databases
MGI MGI:97010; Mmp3.
Gene expression databases
ArrayExpress P28862; -.
CleanEx MM_MMP3; -.
GermOnline ENSMUSG00000043613; Mus musculus.
Family and domain databases
InterPro IPR000585; Hemopexin.
IPR001818; Pept_M10A_M12B.
IPR016293; Pept_M10A_matrix.
IPR006025; Pept_M_Zn_BS.
IPR006026; Peptidase_M.
IPR002477; Peptidoglycan-bd-like.
Graphical view of domain structure.
Gene3D G3DSA:2.110.10.10; Hemopexin; 1.
Pfam PF00045; Hemopexin; 4.
PF00413; Peptidase_M10; 1.
PF01471; PG_binding_1; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001191; Peptidase_M10A_matrix; 1.
PRINTS PR00138; MATRIXIN.
SMART SM00120; HX; 4.
SM00235; ZnMc; 1.
SMART graphical view of domain structure.
PROSITE PS00546; CYSTEINE_SWITCH; 1.
PS00024; HEMOPEXIN; 1.
PS00142; ZINC_PROTEASE; 1.
BLOCKS P28862.
Genome annotation databases
Ensembl ENSMUSG00000043613; Mus musculus. [Contig view]
GeneID 17392; -.
KEGG mmu:17392; -.
Phylogenomic databases
HOVERGEN P28862; -.
Other
SOURCE Mmp3; Mus musculus.
ProtoNet P28862.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Collagen degradation; Extracellular matrix; Glycoprotein; Hydrolase; Metal-binding; Metalloprotease; Protease; Repeat; Secreted; Signal; Zinc; Zymogen.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    17  17     Probable. 
PROPEP   18    99  82     Activation peptide. PRO_0000028730
CHAIN   100   477  378     Stromelysin-1. PRO_0000028731
DOMAIN   296   338  43     Hemopexin-like 1. 
DOMAIN   340   383  44     Hemopexin-like 2. 
DOMAIN   388   435  48     Hemopexin-like 3. 
DOMAIN   437   477  41     Hemopexin-like 4. 
MOTIF   90    97  8     Cysteine switch (By similarity). 
ACT_SITE   219   219        By similarity. 
METAL   92    92        Zinc 2; in inhibited form (By similarity). 
METAL   124   124        Calcium 1 (By similarity). 
METAL   158   158        Calcium 2 (By similarity). 
METAL   168   168        Zinc 1 (By similarity). 
METAL   170   170        Zinc 1 (By similarity). 
METAL   175   175        Calcium 3 (By similarity). 
METAL   176   176        Calcium 3; via carbonyl oxygen (By similarity). 
METAL   178   178        Calcium 3; via carbonyl oxygen (By similarity). 
METAL   180   180        Calcium 3; via carbonyl oxygen (By similarity). 
METAL   183   183        Zinc 1 (By similarity). 
METAL   190   190        Calcium 2; via carbonyl oxygen (By similarity). 
METAL   192   192        Calcium 2; via carbonyl oxygen (By similarity). 
METAL   194   194        Calcium 2 (By similarity). 
METAL   196   196        Zinc 1 (By similarity). 
METAL   198   198        Calcium 3 (By similarity). 
METAL   199   199        Calcium 1 (By similarity). 
METAL   201   201        Calcium 1 (By similarity). 
METAL   201   201        Calcium 3 (By similarity). 
METAL   218   218        Zinc 2; catalytic (By similarity). 
METAL   222   222        Zinc 2; catalytic (By similarity). 
METAL   228   228        Zinc 2; catalytic (By similarity). 
METAL   297   297        Calcium 4; via carbonyl oxygen (By similarity). 
METAL   389   389        Calcium 4; via carbonyl oxygen (By similarity). 
METAL   438   438        Calcium 4; via carbonyl oxygen (By similarity). 
CARBOHYD   120   120        N-linked (GlcNAc...) (Potential). 
DISULFID   290   477        By similarity. 
CONFLICT   468   468        I -> T (in Ref. 3). 
Sequence information
Length: 477 AA [This is the length of the unprocessed precursor] Molecular weight: 53845 Da [This is the MW of the unprocessed precursor] CRC64: 9C15594F45262D37 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MKGLPVLLWL CVVVCSSYPL HDSARDDDAG MELLQKYLEN YYGLAKDVKQ FIKKKDSSLI 

        70         80         90        100        110        120 
VKKIQEMQKF LGLEMTGKLD SNTMELMHKP RCGVPDVGGF STFPGSPKWR KSHITYRIVN 

       130        140        150        160        170        180 
YTPDLPRQSV DSAIEKALKV WEEVTPLTFS RISEGEADIM ISFAVGEHGD FVPFDGPGTV 

       190        200        210        220        230        240 
LAHAYAPGPG INGDAHFDDD ERWTEDVTGT NLFLVAAHEL GHSLGLYHSA KAEALMYPVY 

       250        260        270        280        290        300 
KSSTDLSRFH LSQDDVDGIQ SLYGTPTASP DVLVVPTKSN SLEPETSPMC SSTLFFDAVS 

       310        320        330        340        350        360 
TLRGEVLFFK DRHFWRKSLR TPEPEFYLIS SFWPSLPSNM DAAYEVTNRD TVFIFKGNQF 

       370        380        390        400        410        420 
WAIRGHEELA GYPKSIHTLG LPATVKKIDA AISNKEKRKT YFFVEDKYWR FDEKKQSMEP 

       430        440        450        460        470 
GFPRKIAEDF PGVDSRVDAV FEAFGFLYFF SGSSQLEFDP NAKKVTHILK SNSWFNC 

P28862 in FASTA format

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