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UniProtKB/Swiss-Prot entry P28377


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name RBL_ACTCH
Primary accession number P28377
Secondary accession numbers None
Integrated into Swiss-Prot on December 1, 1992
Sequence was last modified on December 1, 1992 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 56)
Name and origin of the protein
Protein name Ribulose bisphosphate carboxylase large chain [Fragment]
Synonyms RuBisCO large subunit
EC 4.1.1.39
Gene name
Name: rbcL
From
Actinidia chinensis (Kiwi) (Yangtao) [TaxID: 3625] 
Encoded on Plastid; Chloroplast.
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; asterids; Ericales; Actinidiaceae; Actinidia.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=1523408 [NCBI, ExPASy, EBI, Israel, Japan]
Albert V.A., Williams S.E., Chase M.W.;
"Carnivorous plants: phylogeny and structural evolution.";
Science 257:1491-1495(1992).
Comments
  • FUNCTION: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site (By similarity).
  • CATALYTIC ACTIVITY: 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.
  • CATALYTIC ACTIVITY: 3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.
  • COFACTOR: Binds 1 magnesium ion per subunit (By similarity).
  • SUBUNIT: Heterohexadecamer of 8 large chains and 8 small chains; disulfide-linked. The disulfide link is formed within the large subunit homodimers (By similarity).
  • SUBCELLULAR LOCATION: Plastid, chloroplast.
  • PTM: The disulfide bond which can form in the large chain dimeric partners within the hexadecamer appears to be associated with oxidative stress and protein turnover (By similarity).
  • MISCELLANEOUS: The basic functional RuBisCO is composed of a large chain homodimer in a "head-to-tail" conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric "cap" on each end of the "barrel" (By similarity).
  • SIMILARITY: Belongs to the RuBisCO large chain family. Type I subfamily.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L01882; AAA84003.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
HSSP P00875; 1RBO. [HSSP ENTRY / PDB]
SMR P28377; 1-465.
ModBase P28377.
Ontologies
GO
GO:0009573; Cellular component: chloroplast ribulose bisphosphate carboxylase complex (inferred from electronic annotation from InterPro).
GO:0000287; Molecular function: magnesium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0004497; Molecular function: monooxygenase activity (inferred from electronic annotation from UniProtKB-KW).
GO:0016984; Molecular function: ribulose-bisphosphate carboxylase activity (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0009853; Biological process: photorespiration (inferred from electronic annotation from UniProtKB-KW).
GO:0019253; Biological process: reductive pentose-phosphate cycle (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01338; -; 1.
PBIL [Tree]
InterPro IPR000685; RuBisCO_lsu_C.
IPR017443; RuBisCO_lsu_fd_N.
IPR017444; RuBisCO_lsu_N.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.110; RuBisCO_large; 1.
G3DSA:3.30.70.150; RuBisCO_large; 1.
Pfam PF00016; RuBisCO_large; 1.
PF02788; RuBisCO_large_N; 1.
Pfam graphical view of domain structure.
PROSITE PS00157; RUBISCO_LARGE; 1.
BLOCKS P28377.
ProtoNet P28377.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calvin cycle; Carbon dioxide fixation; Chloroplast; Lyase; Magnesium; Metal-binding; Methylation; Monooxygenase; Oxidoreductase; Photorespiration; Photosynthesis; Plastid.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   <1   465  >465     Ribulose bisphosphate carboxylase large chain. PRO_0000062339
ACT_SITE   165   165        Proton acceptor (By similarity). 
ACT_SITE   284   284        Proton acceptor (By similarity). 
METAL   191   191        Magnesium; via carbamate group (By similarity). 
METAL   193   193        Magnesium (By similarity). 
METAL   194   194        Magnesium (By similarity). 
BINDING   113   113        Substrate; in homodimeric partner (By similarity). 
BINDING   163   163        Substrate (By similarity). 
BINDING   167   167        Substrate (By similarity). 
BINDING   285   285        Substrate (By similarity). 
BINDING   317   317        Substrate (By similarity). 
BINDING   369   369        Substrate (By similarity). 
SITE   324   324  1     Transition state stabilizer (By similarity). 
MOD_RES   4     4        N6,N6,N6-trimethyllysine (By similarity). 
MOD_RES   191   191        N6-carboxylysine (By similarity). 
DISULFID   237   237        Interchain; in linked form (By similarity). 
NON_TER   1     1         
Sequence information
Length: 465 AA [This is the length of the partial sequence of the unprocessed precursor] Molecular weight: 51586 Da [This is the MW of the partial sequence of the unprocessed precursor] CRC64: A9C68403C6C11831 [This is a checksum on the sequence]
        10         20         30         40         50         60 
VGFKAGVKDY KLTYYTPDYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE SSTGTWTTVW 

        70         80         90        100        110        120 
TDGLTSLDRY KGRCYHIEPV AGEETQFIAY VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL 

       130        140        150        160        170        180 
RALRLEDLRI PAAYVKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY 

       190        200        210        220        230        240 
ECLRGGLDFT KDDENVNSQP FMRWRDRFLF CAEAIFKAQS ETGEIKGHYL NATAGTCEEM 

       250        260        270        280        290        300 
MKRAVFAREL GVPIVMHDYL TGGFTANTTL AHYCRDNGLL LHIHRAMHAV IDRQKNHGMH 

       310        320        330        340        350        360 
FRVLAKALRM SGGDHIHAGT VVGKLEGERD ITLGFVDLLR DDYIEKDRAR GIYFTQDWVS 

       370        380        390        400        410        420 
LPGVLPVASG GIHVWHMPAL TEIFGDDSVL QFGGGTLGHP WGNAPGAVAN RVALEACVQA 

       430        440        450        460 
RNEGRDLARE GNEIIRNASK WSPELAAACE VWKEIKFEFQ AMDTL 

P28377 in FASTA format

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