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UniProtKB/Swiss-Prot entry P26813


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DNLI_ASFM2
Primary accession number P26813
Secondary accession numbers None
Integrated into Swiss-Prot on August 1, 1992
Sequence was last modified on August 1, 1992 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 44)
Name and origin of the protein
Protein name DNA ligase
Synonyms EC 6.5.1.1
Polydeoxyribonucleotide synthase [ATP]
Gene name None
From
African swine fever virus (isolate Malawi Lil 20/1) (ASFV) [TaxID: 10500] 
Taxonomy Viruses; dsDNA viruses, no RNA stage; Asfarviridae; Asfivirus.
Virus hosts Ornithodoros erraticus [TaxID: 265619]
Phacochoerus africanus (Warthog) [TaxID: 41426]
Sus scrofa (Pig) [TaxID: 9823]
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1093/nar/20.11.2667; PubMed=1614852 [NCBI, ExPASy, EBI, Israel, Japan]
Hammond J.M., Kerr S.M., Smith G.L., Dixon L.K.;
"An African swine fever virus gene with homology to DNA ligases.";
Nucleic Acids Res. 20:2667-2671(1992).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=8021596 [NCBI, ExPASy, EBI, Israel, Japan]
Dixon L.K., Twigg S.R.F., Baylis S.A., Vydelingum S., Bristow C., Hammond J.M., Smith G.L.;
"Nucleotide sequence of a 55 kbp region from the right end of the genome of a pathogenic African swine fever virus isolate (Malawi LIL20/1).";
J. Gen. Virol. 75:1655-1684(1994).
Comments
  • FUNCTION: This protein seals, during DNA replication, DNA recombination and DNA repair, nicks in double-stranded DNA. It is not essential for viral replication and recombination.
  • CATALYTIC ACTIVITY: ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).
  • SIMILARITY: Belongs to the ATP-dependent DNA ligase family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X65192; CAA46310.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X71982; CAA50805.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S23018; S23018.
3D structure databases
ModBase P26813.
Family and domain databases
InterPro IPR012310; DNA_ligase_A_M.
IPR016059; DNA_ligase_CS.
Graphical view of domain structure.
Pfam PF01068; DNA_ligase_A_M; 1.
Pfam graphical view of domain structure.
PROSITE PS00697; DNA_LIGASE_A1; 1.
PS00333; DNA_LIGASE_A2; 1.
PS50160; DNA_LIGASE_A3; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P26813.
Other
ProtoNet P26813.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Cell cycle; Cell division; DNA damage; DNA recombination; DNA repair; DNA replication; Ligase; Nucleotide-binding.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   419  419     DNA ligase. PRO_0000059594
ACT_SITE   151   151        N6-AMP-lysine intermediate (By similarity). 
Sequence information
Length: 419 AA [This is the length of the unprocessed precursor] Molecular weight: 48041 Da [This is the MW of the unprocessed precursor] CRC64: DA781C64CA1B10F0 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MLSQFPGQCS NNVFCFPPIE SETKNGKKAS WIICVQVMQH NTILPITDEM FSTDVKDAVA 

        70         80         90        100        110        120 
EIFTKFFVEE GAVRISKTTR VTEGKNLGKK NATTVVHQAF KDALSKYNRH ARQKRGAHTN 

       130        140        150        160        170        180 
RGMIPPMLVK YFNIIPKTFF EEETDPIVHG KRNGVRAVAC QQGDGSILLY SRTEKEFLGL 

       190        200        210        220        230        240 
DNIKKELKQL YLFIDVRVYL DGELYLHRKP LQWIAGQANA KADSSELHFY VFDCFWSDQL 

       250        260        270        280        290        300 
QMPSNKRQQL LTNIFKQKED LTFIHQVENF SVKNEDEALR LKTQFIKEGY EGAIVRNANG 

       310        320        330        340        350        360 
PYEPGYNNYH SPHLAKLKPL LDAEFILVDY TQGKKGKDLG AILWVCELPN KKRFVVTPKH 

       370        380        390        400        410 
LTYADRYALF QKLTPALFKK HLYGKELTVE YAELSPKTGI PLQARAVGFR EPINVLEII 

P26813 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

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