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UniProtKB/Swiss-Prot entry P26639


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name SYTC_HUMAN
Primary accession number P26639
Secondary accession numbers Q96FP5 Q9BWA6
Integrated into Swiss-Prot on August 1, 1992
Sequence was last modified on February 15, 2005 (Sequence version 3)
Annotations were last modified on    November 25, 2008 (Entry version 94)
Name and origin of the protein
Protein name Threonyl-tRNA synthetase, cytoplasmic
Synonyms EC 6.1.1.3
Threonine--tRNA ligase
ThrRS
Gene name
Name: TARS
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=2033077 [NCBI, ExPASy, EBI, Israel, Japan]
Cruzen M.E., Arfin S.M.;
"Nucleotide and deduced amino acid sequence of human threonyl-tRNA synthetase reveals extensive homology to the Escherichia coli and yeast enzymes.";
J. Biol. Chem. 266:9919-9923(1991).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Cervix, and Lung;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-298, AND MASS SPECTROMETRY.
DOI=10.1016/j.cell.2007.11.025; PubMed=18083107 [NCBI, ExPASy, EBI, Israel, Japan]
Rikova K., Guo A., Zeng Q., Possemato A., Yu J., Haack H., Nardone J., Lee K., Reeves C., Li Y., Hu Y., Tan Z., Stokes M., Sullivan L., Mitchell J., Wetzel R., Macneill J., Ren J.M., Yuan J., Bakalarski C.E., Villen J., Kornhauser J.M., Smith B., Li D., Zhou X., Gygi S.P., Gu T.-L., Polakiewicz R.D., Rush J., Comb M.J.;
"Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer.";
Cell 131:1190-1203(2007).
[4]
UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-222, AND MASS SPECTROMETRY.
TISSUE=Lung adenocarcinoma;
DOI=10.1021/pr060438j; PubMed=17203973 [NCBI, ExPASy, EBI, Israel, Japan]
Vasilescu J., Zweitzig D.R., Denis N.J., Smith J.C., Ethier M., Haines D.S., Figeys D.;
"The proteomic reactor facilitates the analysis of affinity-purified proteins by mass spectrometry: application for identifying ubiquitinated proteins in human cells.";
J. Proteome Res. 6:298-305(2007).
[5]
STRUCTURE BY NMR OF 79-153.
RIKEN structural genomics initiative (RSGI);
"Solution structure of the TGS domain from human threonyl-tRNA synthetase.";
Submitted (JUL-2005) to the PDB data bank.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M63180; AAB04939.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC000517; AAH00517.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC010578; AAH10578.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A38867; YSHUT.
RefSeq NP_689508.3; -.
UniGene Hs.481860
3D structure databases
PDB
1WWT; NMR; -; A=79-153.[ExPASy / RCSB / EBI]
PDBsum 1WWT; -.
ModBase P26639.
Protein-protein interaction databases
IntAct P26639; -.
PTM databases
PhosphoSite P26639; -.
Organism-specific databases
HGNC HGNC:11572; TARS.
GenAtlas TARS.
MIM 187790; gene. [NCBI / EBI]
PharmGKB PA36337; -.
GeneCards P26639.
Gene expression databases
ArrayExpress P26639; -.
CleanEx HS_TARS; -.
GermOnline ENSG00000113407; Homo sapiens.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (non-traceable author statement from UniProtKB).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from InterPro).
GO:0042803; Molecular function: protein homodimerization activity (non-traceable author statement from UniProtKB).
GO:0004829; Molecular function: threonine-tRNA ligase activity (non-traceable author statement from UniProtKB).
GO:0006435; Biological process: threonyl-tRNA aminoacylation (non-traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR002314; aa-tRNA-synt_IIb.
IPR006195; aa-tRNA-synth_II.
IPR004154; Anticodon_bd.
IPR012675; b-grasp_ferredoxin-like.
IPR004095; TGS.
IPR002320; Thr-tRNA-synth_IIa.
IPR012947; tRNA_SAD.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.800; Anticodon_bd; 1.
G3DSA:3.10.20.30; Ferredoxin_fold; 1.
Pfam PF03129; HGTP_anticodon; 1.
PF02824; TGS; 1.
PF00587; tRNA-synt_2b; 1.
PF07973; tRNA_SAD; 1.
Pfam graphical view of domain structure.
PRINTS PR01047; TRNASYNTHTHR.
TIGRFAMs TIGR00418; thrS; 1.
PROSITE PS50862; AA_TRNA_LIGASE_II; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P26639.
ProtoNet P26639.
Proteomic databases
PeptideAtlas P26639; -.
Genome annotation databases
Ensembl ENSG00000113407; Homo sapiens. [Contig view]
GeneID 6897; -.
KEGG hsa:6897; -.
NMPDR fig|9606.3.peg.25109; -.
Phylogenomic databases
HOGENOM P26639; -.
HOVERGEN P26639; -.
Other
DrugBank DB00156; L-Threonine.
NextBio 26959; -.
SOURCE TARS; Homo sapiens.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase; Nucleotide-binding; Phosphoprotein; Polymorphism; Protein biosynthesis; Ubl conjugation.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   723  723     Threonyl-tRNA synthetase, cytoplasmic. PRO_0000101119
MOD_RES   298   298        Phosphotyrosine. 
CROSSLNK   222   222        Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin). 
VARIANT   21    21  1     G -> D (in dbSNP:rs34334786 [NCBI]). VAR_034533 
CONFLICT   164   164        A -> G (in Ref. 1; AAB04939). 
CONFLICT   350   350        A -> V (in Ref. 1; AAB04939). 
CONFLICT   417   417        C -> S (in Ref. 1; AAB04939). 
CONFLICT   439   439        V -> G (in Ref. 1; AAB04939). 
CONFLICT   453   453        T -> I (in Ref. 2; AAH10578). 
CONFLICT   581   581        D -> E (in Ref. 1; AAB04939). 
CONFLICT   612   612        W -> LA (in Ref. 1; AAB04939). 
CONFLICT   636   636        K -> N (in Ref. 1; AAB04939). 
CONFLICT   683   683        S -> T (in Ref. 1; AAB04939). 
STRAND   82    86  5      
STRAND   92    96  5      
TURN   97    99  3      
HELIX   102   108  7      
TURN   111   113  3      
HELIX   114   116  3      
STRAND   120   127  8      
STRAND   129   131  3      
STRAND   135   141  7      
Sequence information
Length: 723 AA [This is the length of the unprocessed precursor] Molecular weight: 83435 Da [This is the MW of the unprocessed precursor] CRC64: 885745118972C5A9 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MFEEKASSPS GKMGGEEKPI GAGEEKQKEG GKKKNKEGSG DGGRAELNPW PEYIYTRLEM 

        70         80         90        100        110        120 
YNILKAEHDS ILAEKAEKDS KPIKVTLPDG KQVDAESWKT TPYQIACGIS QGLADNTVIA 

       130        140        150        160        170        180 
KVNNVVWDLD RPLEEDCTLE LLKFEDEEAQ AVYWHSSAHI MGEAMERVYG GCLCYGPPIE 

       190        200        210        220        230        240 
NGFYYDMYLE EGGVSSNDFS SLEALCKKII KEKQAFERLE VKKETLLAMF KYNKFKCRIL 

       250        260        270        280        290        300 
NEKVNTPTTT VYRCGPLIDL CRGPHVRHTG KIKALKIHKN SSTYWEGKAD METLQRIYGI 

       310        320        330        340        350        360 
SFPDPKMLKE WEKFQEEAKN RDHRKIGRDQ ELYFFHELSP GSCFFLPKGA YIYNALIEFI 

       370        380        390        400        410        420 
RSEYRKRGFQ EVVTPNIFNS RLWMTSGHWQ HYSENMFSFE VEKELFALKP MNCPGHCLMF 

       430        440        450        460        470        480 
DHRPRSWREL PLRLADFGVL HRNELSGALT GLTRVRRFQQ DDAHIFCAME QIEDEIKGCL 

       490        500        510        520        530        540 
DFLRTVYSVF GFSFKLNLST RPEKFLGDIE VWDQAEKQLE NSLNEFGEKW ELNSGDGAFY 

       550        560        570        580        590        600 
GPKIDIQIKD AIGRYHQCAT IQLDFQLPIR FNLTYVSHDG DDKKRPVIVH RAILGSVERM 

       610        620        630        640        650        660 
IAILTENYGG KWPFWLSPRQ VMVVPVGPTC DEYAQKVRQQ FHDAKFMADI DLDPGCTLNK 

       670        680        690        700        710        720 
KIRNAQLAQY NFILVVGEKE KISGTVNIRT RDNKVHGERT ISETIERLQQ LKEFRSKQAE 


EEF 

P26639 in FASTA format

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