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UniProtKB/Swiss-Prot entry P26189


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ADA_SALTY
Primary accession number P26189
Secondary accession numbers None
Integrated into Swiss-Prot on May 1, 1992
Sequence was last modified on January 23, 2002 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 72)
Name and origin of the protein
Protein name Regulatory protein ada
Synonym Regulatory protein of adaptative response
Contains Methylated-DNA--protein-cysteine methyltransferase
     (EC 2.1.1.63)
     (O-6-methylguanine-DNA alkyltransferase)
Gene name
Name: ada
OrderedLocusNames: STM2265
From
Salmonella typhimurium [TaxID: 602] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=1904855 [NCBI, ExPASy, EBI, Israel, Japan]
Hakura A., Morimoto K., Sofuni T., Nohmi T.;
"Cloning and characterization of the Salmonella typhimurium ada gene, which encodes O6-methylguanine-DNA methyltransferase.";
J. Bacteriol. 173:3663-3672(1991).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=LT2 / SGSC1412 / ATCC 700720;
DOI=10.1038/35101614; PubMed=11677609 [NCBI, ExPASy, EBI, Israel, Japan]
McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P., Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D., Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E., Ryan E., Sun H., Florea L., Miller W., Stoneking T., Nhan M., Waterston R., Wilson R.K.;
"Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.";
Nature 413:852-856(2001).
Comments
  • FUNCTION: Repair of alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. Can also repair O-4-methylthymine.
  • FUNCTION: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB.
  • CATALYTIC ACTIVITY: DNA (containing 6-O-methylguanine) + protein L-cysteine = DNA (without 6-O-methylguanine) + protein S-methyl-L-cysteine.
  • COFACTOR: Binds 1 zinc ion per subunit (By similarity).
  • SIMILARITY: In the C-terminal section; belongs to the MGMT family.
  • SIMILARITY: Contains 1 HTH araC/xylS-type DNA-binding domain.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
D90221; BAA14252.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AE008801; AAL21167.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A39433; XYEBOT.
RefSeq NP_461208.1; -.
3D structure databases
HSSP P06134; 1SFE. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
SMR P26189; 187-350.
ModBase P26189.
Protein family/group databases
AraC-XylS P26189.
Enzyme and pathway databases
BioCyc STYP99287:STM2265-MON; -.
Organism-specific databases
StyGene SG10002; ada.
Ontologies
GO
GO:0005622; Cellular component: intracellular (inferred from electronic annotation from InterPro).
GO:0003908; Molecular function: methylated-DNA-[protein]-cysteine S-methyltransferase activity (inferred from electronic annotation from InterPro).
GO:0043565; Molecular function: sequence-specific DNA binding (inferred from electronic annotation from InterPro).
GO:0003700; Molecular function: transcription factor activity (inferred from electronic annotation from InterPro).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from InterPro).
GO:0006281; Biological process: DNA repair (inferred from electronic annotation from InterPro).
GO:0006355; Biological process: regulation of transcription, DNA-dependent (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR004026; Ada_DNA_repair_Zn-bd.
IPR016221; Bifunct_regulatory_prot_Ada.
IPR000005; HTHAraC.
IPR001497; MethylDNA_cys_MeTrfase_AS.
IPR014048; MethylDNA_cys_MeTrfase_DNA_bd.
IPR008332; MethylG_MeTrfase.
IPR011991; Wing_hlx_DNA_bd.
Graphical view of domain structure.
Gene3D G3DSA:3.40.10.10; Ada_DNA_repair_Zn-bd; 1.
G3DSA:1.10.10.10; Wing_hlx_DNA_bd; 1.
PANTHER PTHR10815; MethylDNA_cys_mtrans_DNA_bd; 1.
Pfam PF02805; Ada_Zn_binding; 1.
PF01035; DNA_binding_1; 1.
PF00165; HTH_AraC; 2.
PF02870; Methyltransf_1N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000409; Ada; 1.
PRINTS PR00032; HTHARAC.
SMART SM00342; HTH_ARAC; 1.
SMART graphical view of domain structure.
TIGRFAMs TIGR00589; ogt; 1.
PROSITE PS00041; HTH_ARAC_FAMILY_1; 2.
PS01124; HTH_ARAC_FAMILY_2; 1.
PS00374; MGMT; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P26189.
ProtoNet P26189.
Genome annotation databases
GeneID 1253787; -.
GenomeReviews AE006468_GR; STM2265.
KEGG stm:STM2265; -.
NMPDR fig|99287.1.peg.2189; -.
Phylogenomic databases
HOGENOM P26189; -.
Genome annotation databases
CMR P26189; STM2265.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Activator; Complete proteome; DNA damage; DNA repair; DNA-binding; Metal-binding; Methyltransferase; Transcription; Transcription regulation; Transferase; Zinc.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   353  353     Regulatory protein ada. PRO_0000018749
CHAIN   179   353  175     Methylated-DNA--protein-cysteine methyltransferase. PRO_0000018750
DNA_BIND   102   121  20     H-T-H motif (By similarity). 
ACT_SITE   38    38        Nucleophile; methyl group acceptor from phosphotriester (By similarity). 
ACT_SITE   321   321        Nucleophile; methyl group acceptor (By similarity). 
METAL   38    38        Zinc (By similarity). 
METAL   42    42        Zinc (By similarity). 
METAL   69    69        Zinc (By similarity). 
METAL   72    72        Zinc (By similarity). 
BINDING   34    34        DNA (By similarity). 
BINDING   43    43        DNA (By similarity). 
BINDING   67    67        DNA (By similarity). 
SITE   128   129  2     Cleavage (By similarity). 
SITE   178   179  2     Cleavage (By similarity). 
Sequence information
Length: 353 AA [This is the length of the unprocessed precursor] Molecular weight: 39348 Da [This is the MW of the unprocessed precursor] CRC64: ACE9E13C7EF6C114 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MMKKALLIDD ECWLRVQARD ASADGRFVFA VRTTGVFCRP SCRSKRALRK NVRFFANAQQ 

        70         80         90        100        110        120 
ALDAGFRPCK RCQPDNARAQ QRRLDKIACA CRLLEQETPV TLAFLAQAVA MSPFHLHRLF 

       130        140        150        160        170        180 
KASTGMTPKG WQQAWRARRL REALAKGEPI TAAIYRAGFP DSSSYYRHAD QTLGMTAKQF 

       190        200        210        220        230        240 
RKGGDNVSVR YALTDWVYGR CLVAESERGI CAILPGDSDD ALLAELHTLF PSARHEPADA 

       250        260        270        280        290        300 
LFQQRVRQVV AAINTRDVLL SLPLDIQGTA FQQQVWQALC AIPCGETVSY QQLAATIGKP 

       310        320        330        340        350 
TAVRAVASAC GANKLAMVIP CHRVVRRDGA LSGYRWGVRR KAQLLKREAQ KEE 

P26189 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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