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UniProtKB/Swiss-Prot entry P25445


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name TNR6_HUMAN
Primary accession number P25445
Secondary accession numbers Q14292 Q14293 Q14294 Q14295 Q16652 Q6SSE9
Integrated into Swiss-Prot on May 1, 1992
Sequence was last modified on May 1, 1992 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 123)
Name and origin of the protein
Protein name Tumor necrosis factor receptor superfamily member 6 [Precursor]
Synonyms FASLG receptor
Apoptosis-mediating surface antigen FAS
Apo-1 antigen
CD95 antigen
Gene name
Name: FAS
Synonyms: APT1, FAS1, TNFRSF6
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
DOI=10.1016/0092-8674(91)90614-5; PubMed=1713127 [NCBI, ExPASy, EBI, Israel, Japan]
Itoh N., Yonehara S., Ishii A., Yonehara M., Mizushima S., Sameshima M., Hase A., Seto Y., Nagata S.;
"The polypeptide encoded by the cDNA for human cell surface antigen Fas can mediate apoptosis.";
Cell 66:233-243(1991).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), AND PROTEIN SEQUENCE OF 226-240; 269-291 AND 321-335.
PubMed=1375228 [NCBI, ExPASy, EBI, Israel, Japan]
Oehm A., Behrmann I., Falk W., Pawlita M., Maier G., Klas C., Li-Weber M., Richards S., Dhein J., Trauth B.C., Ponstingl H., Krammer P.H.;
"Purification and molecular cloning of the APO-1 cell surface antigen, a member of the tumor necrosis factor/nerve growth factor receptor superfamily. Sequence identity with the Fas antigen.";
J. Biol. Chem. 267:10709-10715(1992).
[3]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 2; 3 AND 6), AND FUNCTION.
PubMed=7533181 [NCBI, ExPASy, EBI, Israel, Japan]
Cascino I., Fiucci G., Papoff G., Ruberti G.;
"Three functional soluble forms of the human apoptosis-inducing Fas molecule are produced by alternative splicing.";
J. Immunol. 154:2706-2713(1995).
[4]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 2; 3; 4 AND 6), AND TISSUE SPECIFICITY.
PubMed=7575433 [NCBI, ExPASy, EBI, Israel, Japan]
Liu C., Cheng J., Mountz J.D.;
"Differential expression of human Fas mRNA species upon peripheral blood mononuclear cell activation.";
Biochem. J. 310:957-963(1995).
[5]
NUCLEOTIDE SEQUENCE (ISOFORM 5).
TISSUE=Peripheral blood lymphocyte;
Schaetzlein C.E., Poehlmann R., Philippsen P., Eibel H.;
Submitted (JUN-1995) to the EMBL/GenBank/DDBJ databases.
[6]
NUCLEOTIDE SEQUENCE (ISOFORMS 4 AND 5).
PubMed=8648105 [NCBI, ExPASy, EBI, Israel, Japan]
Papoff G., Cascino I., Eramo A., Starace G., Lynch D.H., Ruberti G.;
"An N-terminal domain shared by Fas/Apo-1 (CD95) soluble variants prevents cell death in vitro.";
J. Immunol. 156:4622-4630(1996).
[7]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS THR-16; ILE-122 AND ILE-305.
Livingston R.J., Rieder M.J., Chung M.-W., Ritchie T.K., Olson A.N., Nguyen C.P., Nguyen D.A., Poel C.L., Robertson P.D., Schackwitz W.S., Sherwood J.K., Leithauser B.J., Nickerson D.A.;
"NIEHS-SNPs, environmental genome project, NIEHS ES15478, Department of Genome Sciences, Seattle, WA (URL: http://egp.gs.washington.edu).";
Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
[8]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
TISSUE=Urinary bladder;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[9]
INTERACTION WITH RIPK1.
DOI=10.1016/0092-8674(95)90072-1; PubMed=7538908 [NCBI, ExPASy, EBI, Israel, Japan]
Stanger B.Z., Leder P., Lee T.-H., Kim E., Seed B.;
"RIP: a novel protein containing a death domain that interacts with Fas/APO-1 (CD95) in yeast and causes cell death.";
Cell 81:513-523(1995).
[10]
INTERACTION WITH FEM1B.
DOI=10.1074/jbc.274.45.32461; PubMed=10542291 [NCBI, ExPASy, EBI, Israel, Japan]
Chan S.-L., Tan K.-O., Zhang L., Yee K.S.Y., Ronca F., Chan M.-Y., Yu V.C.;
"F1Aalpha, a death receptor-binding protein homologous to the Caenorhabditis elegans sex-determining protein, FEM-1, is a caspase substrate that mediates apoptosis.";
J. Biol. Chem. 274:32461-32468(1999).
[11]
INTERACTION WITH FAIM2.
DOI=10.1073/pnas.96.22.12667; PubMed=10535980 [NCBI, ExPASy, EBI, Israel, Japan]
Somia N.V., Schmitt M.J., Vetter D.E., Van Antwerp D., Heinemann S.F., Verma I.M.;
"LFG: an anti-apoptotic gene that provides protection from fas-mediated cell death.";
Proc. Natl. Acad. Sci. U.S.A. 96:12667-12672(1999).
[12]
INTERACTION WITH BRE.
DOI=10.1074/jbc.M408678200; PubMed=15465831 [NCBI, ExPASy, EBI, Israel, Japan]
Li Q., Ching A.K.-K., Chan B.C.-L., Chow S.K.-Y., Lim P.-L., Ho T.C.-Y., Ip W.-K., Wong C.-K., Lam C.W.-K., Lee K.K.-H., Chan J.Y.-H., Chui Y.-L.;
"A death receptor-associated anti-apoptotic protein, BRE, inhibits mitochondrial apoptotic pathway.";
J. Biol. Chem. 279:52106-52116(2004).
[13]
SPLICE ISOFORM(S) THAT ARE POTENTIAL NMD TARGET(S).
DOI=10.1186/gb-2004-5-2-r8; PubMed=14759258 [NCBI, ExPASy, EBI, Israel, Japan]
Hillman R.T., Green R.E., Brenner S.E.;
"An unappreciated role for RNA surveillance.";
Genome Biol. 5:RESEARCH008.1-RESEARCH008.16(2004).
[14]
STRUCTURE BY NMR OF 218-335.
DOI=10.1038/384638a0; PubMed=8967952 [NCBI, ExPASy, EBI, Israel, Japan]
Huang B., Eberstadt M., Olejniczak E.T., Meadows R.P., Fesik S.W.;
"NMR structure and mutagenesis of the Fas (APO-1/CD95) death domain.";
Nature 384:638-641(1996).
[15]
VARIANT ALPS1A PRO-241.
DOI=10.1016/0092-8674(95)90013-6; PubMed=7540117 [NCBI, ExPASy, EBI, Israel, Japan]
Fisher G.H., Rosenberg F.J., Straus S.E., Dale J.K., Middleton L.A., Lin A.Y., Strober W., Lenardo M.J., Puck J.M.;
"Dominant interfering Fas gene mutations impair apoptosis in a human autoimmune lymphoproliferative syndrome.";
Cell 81:935-946(1995).
[16]
VARIANT ALPS1A TYR-260.
DOI=10.1056/NEJM199611283352204; PubMed=8929361 [NCBI, ExPASy, EBI, Israel, Japan]
Drappa J., Vaishnaw A.K., Sullivan K.E., Chu J.-L., Elkon K.B.;
"Fas gene mutations in the Canale-Smith syndrome, an inherited lymphoproliferative disorder associated with autoimmunity.";
N. Engl. J. Med. 335:1643-1649(1996).
[17]
VARIANTS ALPS1A TRP-121 AND CYS-232.
PubMed=9028321 [NCBI, ExPASy, EBI, Israel, Japan]
Bettinardi A., Brugnoni D., Quiros-Roldan E., Malagoli A., La Grutta S., Correra A., Notarangelo L.D.;
"Missense mutations in the Fas gene resulting in autoimmune lymphoproliferative syndrome: a molecular and immunological analysis.";
Blood 89:902-909(1997).
[18]
VARIANTS ALPS1A ASP-257 AND SER-310.
PubMed=9028957 [NCBI, ExPASy, EBI, Israel, Japan]
Sneller M.C., Wang J., Dale J.K., Strober W., Middelton L.A., Choi Y., Fleisher T.A., Lim M.S., Jaffe E.S., Puck J.M., Lenardo M.J., Straus S.E.;
"Clincial, immunologic, and genetic features of an autoimmune lymphoproliferative syndrome associated with abnormal lymphocyte apoptosis.";
Blood 89:1341-1348(1997).
[19]
VARIANT ALPS1A ALA-28.
PubMed=9322534 [NCBI, ExPASy, EBI, Israel, Japan]
Pensati L., Costanzo A., Ianni A., Accapezzato D., Iorio R., Natoli G., Nisini R., Almerighi C., Balsano C., Vajro P., Vegnente A., Levrero M.;
"Fas/Apo1 mutations and autoimmune lymphoproliferative syndrome in a patient with type 2 autoimmune hepatitis.";
Gastroenterology 113:1384-1389(1997).
[20]
VARIANT ALPS1A VAL-260.
DOI=10.1016/S0022-3476(98)70102-7; PubMed=9821419 [NCBI, ExPASy, EBI, Israel, Japan]
Infante A.J., Britton H.A., DeNapoli T., Middelton L.A., Lenardo M.J., Jackson C.E., Wang J., Fleisher T., Straus S.E., Puck J.M.;
"The clinical spectrum in a large kindred with autoimmune lymphoproliferative syndrome caused by a Fas mutation that impairs lymphocyte apoptosis.";
J. Pediatr. 133:629-633(1998).
[21]
VARIANTS ALPS1A LYS-241 AND GLN-250.
DOI=10.1086/302333; PubMed=10090885 [NCBI, ExPASy, EBI, Israel, Japan]
Jackson C.E., Fischer R.E., Hsu A.P., Anderson S.M., Choi Y., Wang J., Dale J.K., Fleisher T.A., Middelton L.A., Sneller M.C., Lenardo M.J., Straus S.E., Puck J.M.;
"Autoimmune lymphoproliferative syndrome with defective Fas: genotype influences penetrance.";
Am. J. Hum. Genet. 64:1002-1014(1999).
[22]
VARIANT ALPS1A GLY-272.
DOI=10.1016/S0301-472X(99)00033-8; PubMed=10340403 [NCBI, ExPASy, EBI, Israel, Japan]
Peters A.M., Kohfink B., Martin H., Griesinger F., Wormann B., Gahr M., Roesler J.;
"Defective apoptosis due to a point mutation in the death domain of CD95 associated with autoimmune lymphoproliferative syndrome, T-cell lymphoma, and Hodgkin's disease.";
Exp. Hematol. 27:868-874(1999).
[23]
VARIANTS ALPS1A ARG-82; PRO-250; GLY-260 AND ILE-270.
PubMed=9927496 [NCBI, ExPASy, EBI, Israel, Japan]
Vaishnaw A.K., Orlinick J.R., Chu J.-L., Krammer P.H., Chao M.V., Elkon K.B.;
"The molecular basis for apoptotic defects in patients with CD95 (Fas/Apo-1) mutations.";
J. Clin. Invest. 103:355-363(1999).
[24]
VARIANTS NON-HODGKIN LYMPHOMA THR-25; PHE-180; LEU-183; ILE-198; VAL-260; LYS-264; LYS-272; PHE-278 AND ASN-299.
PubMed=9787134 [NCBI, ExPASy, EBI, Israel, Japan]
Groenbaek K., Straten P.T., Ralfkiaer E., Ahrenkiel V., Andersen M.K., Hansen N.E., Zeuthen J., Hou-Jensen K., Guldberg P.;
"Somatic Fas mutations in non-Hodgkin's lymphoma: association with extranodal disease and autoimmunity.";
Blood 92:3018-3024(1998).
[25]
VARIANTS SQUAMOUS CELL CARCINOMA SER-118; ARG-178 AND ASP-255.
DOI=10.1046/j.1523-1747.2000.00819.x; PubMed=10620127 [NCBI, ExPASy, EBI, Israel, Japan]
Lee S.H., Shin M.S., Kim H.S., Park W.S., Kim S.Y., Jang J.J., Rhim K.J., Jang J., Lee H.K., Park J.Y., Oh R.R., Han S.Y., Lee J.H., Lee J.Y., Yoo N.J.;
"Somatic mutations of Fas (Apo-1/CD95) gene in cutaneous squamous cell carcinoma arising from a burn scar.";
J. Invest. Dermatol. 114:122-126(2000).
[26]
VARIANTS ALPS1A PRO-241; VAL-260; ILE-270 AND GLY-272.
DOI=10.1182/blood.V98.1.194; PubMed=11418480 [NCBI, ExPASy, EBI, Israel, Japan]
Straus S.E., Jaffe E.S., Puck J.M., Dale J.K., Elkon K.B., Roesen-Wolff A., Peters A.M.J., Sneller M.C., Hallahan C.W., Wang J., Fischer R.E., Jackson C.M., Lin A.Y., Baeumler C., Siegert E., Marx A., Vaishnaw A.K., Grodzicky T., Fleisher T.A., Lenardo M.J.;
"The development of lymphomas in families with autoimmune lymphoproliferative syndrome with germline Fas mutations and defective lymphocyte apoptosis.";
Blood 98:194-200(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M67454; AAA63174.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X63717; CAA45250.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X89101; CAA61473.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z47993; CAA88031.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z47994; CAA88032.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z47995; CAA88033.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z70520; CAA94431.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z70519; CAA94430.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X83490; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
X83491; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
X83492; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
X83493; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
AY450925; AAR08906.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC012479; AAH12479.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A40036; A40036.
I37383; I37383.
I37384; I37384.
S58662; S58662.
RefSeq NP_000034.1; -.
NP_690610.1; -.
NP_690611.1; -.
NP_690612.1; -.
NP_690613.1; -.
NP_690614.1; -.
NP_690615.1; -.
NP_690616.1; -.
UniGene Hs.244139
3D structure databases
PDB
1BZI; Model; -; A=1-335.[ExPASy / RCSB / EBI]
1DDF; NMR; -; A=218-335.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1BZI; -.
1DDF; -.
ModBase P25445.
Protein-protein interaction databases
DIP DIP:2998N; -.
DIP:924N; -.
IntAct P25445; -.
PTM databases
PhosphoSite P25445; -.
Enzyme and pathway databases
Reactome REACT_578; Apoptosis.
Polymorphism databases
NIEHS-SNPs FAS.
Organism-specific databases
H-InvDB HIX0009017; -.
HGNC HGNC:11920; FAS.
GenAtlas FAS.
HPA CAB000124; -.
MIM 134637; gene. [NCBI / EBI]
601859; phenotype. [NCBI / EBI]
Orphanet 3261; Autoimmune lymphoproliferative syndrome.
PharmGKB PA36613; -.
GeneCards P25445.
Gene expression databases
ArrayExpress P25445; -.
CleanEx HS_FAS; -.
GermOnline ENSG00000026103; Homo sapiens.
Ontologies
GO
GO:0005829; Cellular component: cytosol (non-traceable author statement from UniProtKB).
GO:0005576; Cellular component: extracellular region (inferred from electronic annotation from UniProtKB-KW).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005625; Cellular component: soluble fraction (traceable author statement from ProtInc).
GO:0042802; Molecular function: identical protein binding (inferred from physical interaction from IntAct).
GO:0004888; Molecular function: transmembrane receptor activity (inferred from electronic annotation from InterPro).
GO:0008633; Biological process: activation of pro-apoptotic gene products (inferred from experiment from Reactome).
GO:0006916; Biological process: anti-apoptosis (traceable author statement from ProtInc).
GO:0006955; Biological process: immune response (inferred from electronic annotation from InterPro).
GO:0008624; Biological process: induction of apoptosis by extracellular signals (inferred from experiment from Reactome).
GO:0006461; Biological process: protein complex assembly (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR000488; Death.
IPR011029; DEATH_like.
IPR008063; Fas_rcpt.
IPR001368; TNFR_c6.
Graphical view of domain structure.
Gene3D G3DSA:1.10.533.10; DEATH_like; 1.
Pfam PF00531; Death; 1.
PF00020; TNFR_c6; 2.
Pfam graphical view of domain structure.
PRINTS PR01680; FASRECEPTOR.
SMART SM00005; DEATH; 1.
SM00208; TNFR; 3.
SMART graphical view of domain structure.
PROSITE PS50017; DEATH_DOMAIN; 1.
PS00652; TNFR_NGFR_1; 2.
PS50050; TNFR_NGFR_2; 2.
PROSITE graphical view of domain structure (profiles).
ProtoNet P25445.
Genome annotation databases
Ensembl ENSG00000026103; Homo sapiens. [Contig view]
GeneID 355; -.
KEGG hsa:355; -.
Phylogenomic databases
HOVERGEN P25445; -.
Other
LinkHub P25445; -.
NextBio 1471; -.
SOURCE FAS; Homo sapiens.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Alternative splicing; Apoptosis; Cell membrane; Direct protein sequencing; Disease mutation; Glycoprotein; Membrane; Polymorphism; Receptor; Repeat; Secreted; Signal; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    25  25     Potential. 
CHAIN   26   335  310     Tumor necrosis factor receptor superfamily member 6. PRO_0000034563
TOPO_DOM   26   173  148     Extracellular (Potential). 
TRANSMEM   174   190  17     Potential. 
TOPO_DOM   191   335  145     Cytoplasmic (Potential). 
REPEAT   47    83  37     TNFR-Cys 1. 
REPEAT   84   127  44     TNFR-Cys 2. 
REPEAT   128   166  39     TNFR-Cys 3. 
DOMAIN   230   314  85     Death. 
REGION   212   317  106     Interaction with HIPK3 (By similarity). 
CARBOHYD   118   118        N-linked (GlcNAc...) (Potential). 
CARBOHYD   136   136        N-linked (GlcNAc...) (Potential). 
DISULFID   59    73        By similarity. 
DISULFID   63    82        By similarity. 
DISULFID   85   101        By similarity. 
DISULFID   104   119        By similarity. 
DISULFID   107   127        By similarity. 
DISULFID   129   143        By similarity. 
DISULFID   146   157        By similarity. 
DISULFID   149   165        By similarity. 
VAR_SEQ   66   103        GERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRR -> DVNMESSRNAHSPATPSAKRKDPDLTWGGFVFFFCQFH (in isoform 2). VSP_006481
VAR_SEQ   66    86        GERKARDCTVNGDEPDCVPCQ -> DVNMESSRNAHSPATPSAKRK (in isoform 3). VSP_006483
VAR_SEQ   87   335        Missing (in isoform 3). VSP_006484
VAR_SEQ   104   335        Missing (in isoform 2). VSP_006482
VAR_SEQ   112   149        GLEVEINCTRTQNTKCRCKPNFFCNSTVCEHCDPCTKC -> DVNMESSRNAHSPATPSAKRKDPDLTWGGFVFFFCQFH (in isoform 4). VSP_006485
VAR_SEQ   112   132        GLEVEINCTRTQNTKCRCKPN -> DVNMESSRNAHSPATPSAKRK (in isoform 5). VSP_006487
VAR_SEQ   133   335        Missing (in isoform 5). VSP_006488
VAR_SEQ   150   335        Missing (in isoform 4). VSP_006486
VAR_SEQ   169   189        Missing (in isoform 6). VSP_006489
VARIANT   16    16  1     A -> T (in dbSNP:rs3218619 [NCBI]). VAR_020008 
VARIANT   25    25  1     A -> T (in non-Hodgkin lymphoma; somatic mutation). VAR_013416 
VARIANT   28    28  1     T -> A (in ALPS1A; associated with autoimmune hepatitis type 2). VAR_013417 
VARIANT   82    82  1     C -> R (in ALPS1A). VAR_013418 
VARIANT   118   118  1     N -> S (in squamous cell carcinoma; burn-scar related; somatic mutation). VAR_018321 
VARIANT   121   121  1     R -> W (in ALPS1A). VAR_013419 
VARIANT   122   122  1     T -> I (in dbSNP:rs3218614 [NCBI]). VAR_020009 
VARIANT   178   178  1     C -> R (in squamous cell carcinoma; burn-scar related; somatic mutation). VAR_018322 
VARIANT   180   180  1     L -> F (in non-Hodgkin lymphoma; somatic mutation). VAR_013420 
VARIANT   183   183  1     P -> L (in non-Hodgkin lymphoma; somatic mutation). VAR_013421 
VARIANT   198   198  1     T -> I (in non-Hodgkin lymphoma; somatic mutation). VAR_013422