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UniProtKB/Swiss-Prot entry P23385


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name GRM1_RAT
Primary accession number P23385
Secondary accession numbers None
Integrated into Swiss-Prot on November 1, 1991
Sequence was last modified on November 1, 1991 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 88)
Name and origin of the protein
Protein name Metabotropic glutamate receptor 1 [Precursor]
Synonym mGluR1
Gene name
Name: Grm1
Synonyms: Gprc1a, Mglur1
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Sprague-Dawley;
TISSUE=Brain;
DOI=10.1038/349760a0; PubMed=1847995 [NCBI, ExPASy, EBI, Israel, Japan]
Masu M., Tanabe Y., Tsuchida K., Shigemoto R., Nakanishi S.;
"Sequence and expression of a metabotropic glutamate receptor.";
Nature 349:760-765(1991).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Brain;
PubMed=1656524 [NCBI, ExPASy, EBI, Israel, Japan]
Houamed K.M., Kuijper J.L., Gilbert T.L., Haldeman B.A., O'Hara P.J., Mulvihill E.R., Almers W., Hagen F.S.;
"Cloning, expression, and gene structure of a G protein-coupled glutamate receptor from rat brain.";
Science 252:1318-1321(1991).
[3]
ALTERNATIVE SPLICING (ISOFORM 1B).
TISSUE=Brain;
DOI=10.1016/0896-6273(92)90118-W; PubMed=1309649 [NCBI, ExPASy, EBI, Israel, Japan]
Tanabe Y., Masu M., Ishii T., Shigemoto R., Nakanishi S.;
"A family of metabotropic glutamate receptors.";
Neuron 8:169-179(1992).
[4]
ALTERNATIVE SPLICING (ISOFORM 1C).
TISSUE=Brain;
PubMed=1438218 [NCBI, ExPASy, EBI, Israel, Japan]
Pin J.-P., Waeber C., Prezeau L., Bockaert J., Heinemann S.F.;
"Alternative splicing generates metabotropic glutamate receptors inducing different patterns of calcium release in Xenopus oocytes.";
Proc. Natl. Acad. Sci. U.S.A. 89:10331-10335(1992).
[5]
INTERACTION WITH SIAH1.
PubMed=10469171 [NCBI, ExPASy, EBI, Israel, Japan]
Ishikawa K., Nash S.R., Nishimune A., Neki A., Kaneko S., Nakanishi S.;
"Competitive interaction of seven in absentia homolog-1A and Ca2+/calmodulin with the cytoplasmic tail of group 1 metabotropic glutamate receptors.";
Genes Cells 4:381-390(1999).
[6]
INTERACTION WITH GRASP.
PubMed=11850456 [NCBI, ExPASy, EBI, Israel, Japan]
Kitano J., Kimura K., Yamazaki Y., Soda T., Shigemoto R., Nakajima Y., Nakanishi S.;
"Tamalin, a PDZ domain-containing protein, links a protein complex formation of group 1 metabotropic glutamate receptors and the guanine nucleotide exchange factor cytohesins.";
J. Neurosci. 22:1280-1289(2002).
Comments
  • FUNCTION: Receptor for glutamate. The activity of this receptor is mediated by a G-protein that activates a phosphatidylinositol-calcium second messenger system. May participate in the central action of glutamate in the CNS, such as long-term potentiation in the hippocampus and long-term depression in the cerebellum.
  • SUBUNIT: Homodimer; disulfide-linked. The PPXXF motif binds HOMER1, HOMER2 and HOMER3. Interacts with RYR1, RYR2, ITPR1, SHANK1 and SHANK3 (By similarity). Interacts with SIAH1 and GRASP.
  • SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein.
  • ALTERNATIVE PRODUCTS: 3 named isoforms [FASTA] produced by alternative splicing.
    Name1A
    Isoform IDP23385-1
    This is the isoform sequence displayed in this entry.
    Name1B
    Isoform IDP23385-2
    Note: C-terminally truncated forms of isoform 1A.
    Features which should be applied to build the isoform sequence: VSP_002026, VSP_002027.
    Name1C
    Isoform IDP23385-3
    Note: C-terminally truncated forms of isoform 1A.
    Features which should be applied to build the isoform sequence: VSP_002028, VSP_002029.
  • TISSUE SPECIFICITY: Predominantly expressed in cerebellar Purkinje cells, CA2-CA3 pyramidal cells of the hippocampus, and mitral and tufted cells of the olfactory bulb.
  • MISCELLANEOUS: Activated by quisqualate > glutamate > ibotenate > trans-1- aminocyclopentyl-1,3-dicarboxylate; inhibited by 2-amino-3-phosphonopropionate.
  • SIMILARITY: Belongs to the G-protein coupled receptor 3 family [view classification].
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X57569; CAA40799.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M61099; AAA19497.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
S48085; AAB24138.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A41939; A41939.
RefSeq NP_001107802.1; -.
NP_058707.1; -.
UniGene Rn.87787
3D structure databases
PDB
1EWK; X-ray; 2.20 A; A/B=33-522.[ExPASy / RCSB / EBI]
1EWT; X-ray; 3.70 A; A/B=33-522.[ExPASy / RCSB / EBI]
1EWV; X-ray; 4.00 A; A/B=33-522.[ExPASy / RCSB / EBI]
1ISR; X-ray; 4.00 A; A=33-522.[ExPASy / RCSB / EBI]
1ISS; X-ray; 3.30 A; A/B=33-522.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1EWK; -.
1EWT; -.
1EWV; -.
1ISR; -.
1ISS; -.
ModBase P23385.
Protein family/group databases
GPCRDB P23385; GRM1_RAT.
PTM databases
PhosphoSite P23385; -.
Organism-specific databases
RGD 2742; Grm1.
Gene expression databases
ArrayExpress P23385; -.
GermOnline ENSRNOG00000014290; Rattus norvegicus.
Ontologies
GO
GO:0030424; Cellular component: axon (inferred from direct assay from UniProtKB).
GO:0042734; Cellular component: presynaptic membrane (inferred from direct assay from UniProtKB).
GO:0001639; Molecular function: PLC activating metabotropic glutamate receptor activity (traceable author statement from UniProtKB).
GO:0051482; Biological process: elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) (traceable author statement from UniProtKB).
GO:0051899; Biological process: membrane depolarization (traceable author statement from UniProtKB).
GO:0007206; Biological process: metabotropic glutamate receptor, phospholipase C activating pathway (traceable author statement from UniProtKB).
GO:0014048; Biological process: regulation of glutamate secretion (traceable author statement from UniProtKB).
GO:0051966; Biological process: regulation of synaptic transmission, glutamatergic (inferred from direct assay from UniProtKB).
GO:0051932; Biological process: synaptic transmission, GABAergic (traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR001828; ANF_lig_bd_rcpt.
IPR000337; GPCR_3.
IPR000162; GPCR_3_mtglu_rcpt.
IPR001256; GPCR_3_mtglu_rcpt_1.
IPR000202; GPCR_3_mtglu_rcpt_5.
IPR011500; GPCR_3_NCR.
Graphical view of domain structure.
PANTHER PTHR11336:SF11; Mtglu_rcpt_5; 1.
Pfam PF00003; 7tm_3; 1.
PF01094; ANF_receptor; 1.
PF07562; NCD3G; 1.
Pfam graphical view of domain structure.
PRINTS PR00248; GPCRMGR.
PR01051; MTABOTROPC1R.
PR01055; MTABOTROPC5R.
PR00593; MTABOTROPICR.
PROSITE PS00979; G_PROTEIN_RECEP_F3_1; 1.
PS00980; G_PROTEIN_RECEP_F3_2; 1.
PS00981; G_PROTEIN_RECEP_F3_3; 1.
PS50259; G_PROTEIN_RECEP_F3_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P23385.
Genome annotation databases
Ensembl ENSRNOG00000014290; Rattus norvegicus. [Contig view]
GeneID 24414; -.
KEGG rno:24414; -.
Phylogenomic databases
HOVERGEN P23385; -.
Other
GPCRDB-Snakes P23385.
ProtoNet P23385.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Alternative splicing; Cell membrane; G-protein coupled receptor; Glycoprotein; Membrane; Phosphoprotein; Receptor; Signal; Transducer; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom    To Length Description FTId
SIGNAL   1     18  18     Potential. 
CHAIN   19   1199  1181     Metabotropic glutamate receptor 1. PRO_0000012924
TOPO_DOM   19    592  574     Extracellular (Potential). 
TRANSMEM   593    615  23     1 (Potential). 
TOPO_DOM   616    629  14     Cytoplasmic (Potential). 
TRANSMEM   630    650  21     2 (Potential). 
TOPO_DOM   651    661  11     Extracellular (Potential). 
TRANSMEM   662    680  19     3 (Potential). 
TOPO_DOM   681    706  26     Cytoplasmic (Potential). 
TRANSMEM   707    727  21     4 (Potential). 
TOPO_DOM   728    750  23     Extracellular (Potential). 
TRANSMEM   751    772  22     5 (Potential). 
TOPO_DOM   773    785  13     Cytoplasmic (Potential). 
TRANSMEM   786    808  23     6 (Potential). 
TOPO_DOM   809    814  6     Extracellular (Potential). 
TRANSMEM   815    840  26     7 (Potential). 
TOPO_DOM   841   1199  359     Cytoplasmic (Potential). 
COMPBIAS   1014   1034  21     Gln/Pro-rich. 
COMPBIAS   1074   1080  7     Gln/Pro-rich. 
COMPBIAS   1126   1135  10     Asp/Glu-rich (acidic). 
COMPBIAS   1140   1199  60     Ser-rich. 
MOD_RES   672    672        Phosphotyrosine (By similarity). 
MOD_RES   1119   1119        Phosphotyrosine (By similarity). 
CARBOHYD   98     98        N-linked (GlcNAc...) (Potential). 
CARBOHYD   223    223        N-linked (GlcNAc...) (Potential). 
CARBOHYD   397    397        N-linked (GlcNAc...) (Potential). 
CARBOHYD   515    515        N-linked (GlcNAc...) (Potential). 
DISULFID   140    140        Interchain (By similarity). 
VAR_SEQ   887    906        NSNGKSVSWSEPGGRQAPKG -> KKRQPEFSPSSQCPSAHAQL (in isoform 1B). VSP_002026
VAR_SEQ   888    897        SNGKSVSWSE -> FALDRQNTVY (in isoform 1C). VSP_002028
VAR_SEQ   898   1199        Missing (in isoform 1C). VSP_002029
VAR_SEQ   907   1199        Missing (in isoform 1B). VSP_002027
STRAND   39     41  3      
STRAND   44     51  8      
TURN   59     65  7      
TURN   72     75  4      
HELIX   76     91  16      
STRAND   93     96  4      
STRAND   101    107  7      
HELIX   112    123  12      
STRAND   156    160  5      
HELIX   165    175  11      
HELIX   176    178  3      
STRAND   182    186  5      
HELIX   190    193  4      
TURN   195    197  3      
STRAND   201    205  5      
HELIX   208    221  14      
STRAND   226    234  9      
HELIX   235    251  17      
STRAND   254    261  8      
HELIX   267    278  12      
TURN   279    283  5      
STRAND   286    290  5      
HELIX   293    306  14      
STRAND   313    316  4      
TURN   318    322  5      
HELIX   324    327  4      
HELIX   331    334  4      
STRAND   338    342  5      
HELIX   348    354  7      
TURN   359    361  3      
HELIX   368    375  8      
TURN   400    403  4      
HELIX   410    431  22      
HELIX   440    442  3      
HELIX   447    455  9      
STRAND   458    460  3      
STRAND   466    468  3      
STRAND   479    486  8      
STRAND   488    490  3      
STRAND   492    501  10      
STRAND   504    507  4      
TURN   509    511  3      
Sequence information
Length: 1199 AA [This is the length of the unprocessed precursor] Molecular weight: 133236 Da [This is the MW of the unprocessed precursor] CRC64: EEE5A04C50694B9F [This is a checksum on the sequence]
        10         20         30         40         50         60 
MVRLLLIFFP MIFLEMSILP RMPDRKVLLA GASSQRSVAR MDGDVIIGAL FSVHHQPPAE 

        70         80         90        100        110        120 
KVPERKCGEI REQYGIQRVE AMFHTLDKIN ADPVLLPNIT LGSEIRDSCW HSSVALEQSI 

       130        140        150        160        170        180 
EFIRDSLISI RDEKDGLNRC LPDGQTLPPG RTKKPIAGVI GPGSSSVAIQ VQNLLQLFDI 

       190        200        210        220        230        240 
PQIAYSATSI DLSDKTLYKY FLRVVPSDTL QARAMLDIVK RYNWTYVSAV HTEGNYGESG 

       250        260        270        280        290        300 
MDAFKELAAQ EGLCIAHSDK IYSNAGEKSF DRLLRKLRER LPKARVVVCF CEGMTVRGLL 

       310        320        330        340        350        360 
SAMRRLGVVG EFSLIGSDGW ADRDEVIEGY EVEANGGITI KLQSPEVRSF DDYFLKLRLD 

       370        380        390        400        410        420 
TNTRNPWFPE FWQHRFQCRL PGHLLENPNF KKVCTGNESL EENYVQDSKM GFVINAIYAM 

       430        440        450        460        470        480 
AHGLQNMHHA LCPGHVGLCD AMKPIDGRKL LDFLIKSSFV GVSGEEVWFD EKGDAPGRYD 

       490        500        510        520        530        540 
IMNLQYTEAN RYDYVHVGTW HEGVLNIDDY KIQMNKSGMV RSVCSEPCLK GQIKVIRKGE 

       550        560        570        580        590        600 
VSCCWICTAC KENEFVQDEF TCRACDLGWW PNAELTGCEP IPVRYLEWSD IESIIAIAFS 

       610        620        630        640        650        660 
CLGILVTLFV TLIFVLYRDT PVVKSSSREL CYIILAGIFL GYVCPFTLIA KPTTTSCYLQ 

       670        680        690        700        710        720 
RLLVGLSSAM CYSALVTKTN RIARILAGSK KKICTRKPRF MSAWAQVIIA SILISVQLTL 

       730        740        750        760        770        780 
VVTLIIMEPP MPILSYPSIK EVYLICNTSN LGVVAPVGYN GLLIMSCTYY AFKTRNVPAN 

       790        800        810        820        830        840 
FNEAKYIAFT MYTTCIIWLA FVPIYFGSNY KIITTCFAVS LSVTVALGCM FTPKMYIIIA 

       850        860        870        880        890        900 
KPERNVRSAF TTSDVVRMHV GDGKLPCRSN TFLNIFRRKK PGAGNANSNG KSVSWSEPGG 

       910        920        930        940        950        960 
RQAPKGQHVW QRLSVHVKTN ETACNQTAVI KPLTKSYQGS GKSLTFSDAS TKTLYNVEEE 

       970        980        990       1000       1010       1020 
DNTPSAHFSP PSSPSMVVHR RGPPVATTPP LPPHLTAEET PLFLADSVIP KGLPPPLPQQ 

      1030       1040       1050       1060       1070       1080 
QPQQPPPQQP PQQPKSLMDQ LQGVVTNFGS GIPDFHAVLA GPGTPGNSLR SLYPPPPPPQ 

      1090       1100       1110       1120       1130       1140 
HLQMLPLHLS TFQEESISPP GEDIDDDSER FKLLQEFVYE REGNTEEDEL EEEEDLPTAS 

      1150       1160       1170       1180       1190 
KLTPEDSPAL TPPSPFRDSV ASGSSVPSSP VSESVLCTPP NVTYASVILR DYKQSSSTL 

P23385 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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