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UniProtKB/Swiss-Prot entry P22748


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CAH4_HUMAN
Primary accession number P22748
Secondary accession numbers None
Integrated into Swiss-Prot on August 1, 1991
Sequence was last modified on August 1, 1992 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 97)
Name and origin of the protein
Protein name Carbonic anhydrase 4 [Precursor]
Synonyms EC 4.2.1.1
Carbonic anhydrase IV
CA-IV
Carbonate dehydratase IV
Gene name
Name: CA4
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=1311094 [NCBI, ExPASy, EBI, Israel, Japan]
Okuyama T., Sato S., Zhu X.L., Waheed A., Sly W.S.;
"Human carbonic anhydrase IV: cDNA cloning, sequence comparison, and expression in COS cell membranes.";
Proc. Natl. Acad. Sci. U.S.A. 89:1315-1319(1992).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1006/geno.1993.1247; PubMed=8325641 [NCBI, ExPASy, EBI, Israel, Japan]
Okuyama T., Batanian J.R., Sly W.S.;
"Genomic organization and localization of gene for human carbonic anhydrase IV to chromosome 17q.";
Genomics 16:678-684(1993).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Brain, and Placenta;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
PROTEIN SEQUENCE OF 19-35; 113-123 AND 233-239.
TISSUE=Lung;
PubMed=2111324 [NCBI, ExPASy, EBI, Israel, Japan]
Zhu X.L., Sly W.S.;
"Carbonic anhydrase IV from human lung. Purification, characterization, and comparison with membrane carbonic anhydrase from human kidney.";
J. Biol. Chem. 265:8795-8801(1990).
[5]
DISULFIDE BONDS.
DOI=10.1006/abbi.1996.0412; PubMed=8809084 [NCBI, ExPASy, EBI, Israel, Japan]
Waheed A., Okuyama T., Heyduk T., Sly W.S.;
"Carbonic anhydrase IV: purification of a secretory form of the recombinant human enzyme and identification of the positions and importance of its disulfide bonds.";
Arch. Biochem. Biophys. 333:432-438(1996).
[6]
GPI-ANCHOR AT SER-284, AND MUTAGENESIS OF SER-284.
DOI=10.1016/0003-9861(95)90015-2; PubMed=7625839 [NCBI, ExPASy, EBI, Israel, Japan]
Okuyama T., Waheed A., Kusumoto W., Zhu X.L., Sly W.S.;
"Carbonic anhydrase IV: role of removal of C-terminal domain in glycosylphosphatidylinositol anchoring and realization of enzyme activity.";
Arch. Biochem. Biophys. 320:315-322(1995).
[7]
X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS) OF 19-284.
DOI=10.1073/pnas.93.24.13589; PubMed=8942978 [NCBI, ExPASy, EBI, Israel, Japan]
Stams T., Nair S.K., Okuyama T., Waheed A., Sly W.S., Christianson D.W.;
"Crystal structure of the secretory form of membrane-associated human carbonic anhydrase IV at 2.8-A resolution.";
Proc. Natl. Acad. Sci. U.S.A. 93:13589-13594(1996).
[8]
VARIANTS RP17 TRP-14 AND SER-219, FUNCTION, TISSUE SPECIFICITY, AND INTERACTION WITH SLC4A4.
DOI=10.1093/hmg/ddi023; PubMed=15563508 [NCBI, ExPASy, EBI, Israel, Japan]
Yang Z., Alvarez B.V., Chakarova C., Jiang L., Karan G., Frederick J.M., Zhao Y., Sauve Y., Li X., Zrenner E., Wissinger B., Den Hollander A.I., Katz B., Baehr W., Cremers F.P., Casey J.R., Bhattacharya S.S., Zhang K.;
"Mutant carbonic anhydrase 4 impairs pH regulation and causes retinal photoreceptor degeneration.";
Hum. Mol. Genet. 14:255-265(2005).
Comments
  • FUNCTION: Reversible hydration of carbon dioxide. May stimulate the sodium/bicarbonate transporter activity of SLC4A4.
  • CATALYTIC ACTIVITY: H2CO3 = CO2 + H2O.
  • COFACTOR: Zinc.
  • ENZYME REGULATION: Inhibited by acetazolamide.
  • SUBUNIT: Interacts with SLC4A4.
  • SUBCELLULAR LOCATION: Cell membrane; Lipid-anchor, GPI-anchor.
  • TISSUE SPECIFICITY: Expressed in the endothelium of the choriocapillaris in eyes (at protein level).
  • DISEASE: Defects in CA4 are the cause of retinitis pigmentosa type 17 (RP17) [MIM:600852]. RP leads to degeneration of retinal photoreceptor cells. Patients typically have night vision blindness and loss of midperipheral visual field. As their condition progresses, they lose their far peripheral visual field and eventually central vision as well. RP17 inheritance is autosomal dominant.
  • SIMILARITY: Belongs to the alpha-carbonic anhydrase family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M83670; AAA35630.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L10955; AAA35625.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L10951; AAA35625.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L10953; AAA35625.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L10954; AAA35625.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L10955; AAA35626.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L10954; AAA35626.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC057792; AAH57792.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC069649; AAH69649.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC074768; AAH74768.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A45745; CRHU4.
RefSeq NP_000708.1; -.
UniGene Hs.89485
3D structure databases
PDB
1ZNC; X-ray; 2.80 A; A/B=19-284.[ExPASy / RCSB / EBI]
PDBsum 1ZNC; -.
ModBase P22748.
Organism-specific databases
H-InvDB HIX0039194; -.
HGNC HGNC:1375; CA4.
GenAtlas CA4.
HPA HPA011089; -.
HPA017258; -.
MIM 114760; gene. [NCBI / EBI]
600852; phenotype. [NCBI / EBI]
Orphanet 791; Retinitis pigmentosa.
PharmGKB PA24379; -.
GeneCards P22748.
Gene expression databases
ArrayExpress P22748; -.
CleanEx HS_CA4; -.
GermOnline ENSG00000167434; Homo sapiens.
Ontologies
GO
GO:0031225; Cellular component: anchored to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005624; Cellular component: membrane fraction (traceable author statement from ProtInc).
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0004089; Molecular function: carbonate dehydratase activity (traceable author statement from ProtInc).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from InterPro).
GO:0006730; Biological process: one-carbon compound metabolic process (inferred from electronic annotation from InterPro).
GO:0050896; Biological process: response to stimulus (inferred from electronic annotation from UniProtKB-KW).
GO:0007601; Biological process: visual perception (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001148; Euk_COanhd.
Graphical view of domain structure.
Gene3D G3DSA:3.10.200.10; Euk_COanhd; 1.
PANTHER PTHR18952; Euk_COanhd; 1.
Pfam PF00194; Carb_anhydrase; 1.
Pfam graphical view of domain structure.
ProDom PD000865; Euk_COanhd; 1.
[Domain structure / List of seq. sharing at least 1 domain]
PROSITE PS00162; ALPHA_CA_1; 1.
PS51144; ALPHA_CA_2; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet P22748.
Genome annotation databases
Ensembl ENSG00000167434; Homo sapiens. [Contig view]
GeneID 762; -.
KEGG hsa:762; -.
Phylogenomic databases
HOGENOM P22748; -.
HOVERGEN P22748; -.
Other
BindingDB P22748; -.
DrugBank DB00436; Bendroflumethiazide.
DB00562; Benzthiazide.
DB00880; Chlorothiazide.
DB00606; Cyclothiazide.
DB01119; Diazoxide.
DB00999; Hydrochlorothiazide.
DB00774; Hydroflumethiazide.
DB00232; Methyclothiazide.
DB01325; Quinethazone.
DB00273; Topiramate.
DB01021; Trichlormethiazide.
LinkHub P22748; -.
NextBio 3082; -.
SOURCE CA4; Homo sapiens.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Cell membrane; Direct protein sequencing; Disease mutation; Glycoprotein; GPI-anchor; Lipoprotein; Lyase; Membrane; Metal-binding; Retinitis pigmentosa; Sensory transduction; Signal; Vision; Zinc.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    18  18      
CHAIN   19   284  266     Carbonic anhydrase 4. PRO_0000004226
PROPEP   285   312  28     Removed in mature form. PRO_0000004227
METAL   115   115        Zinc; catalytic. 
METAL   117   117        Zinc; catalytic. 
METAL   140   140        Zinc; catalytic. 
LIPID   284   284        GPI-anchor amidated serine. 
DISULFID   24    36         
DISULFID   46   229         
VARIANT   14    14  1     R -> W (in RP17; abolishes interaction with SLC4A4. Impaired SLC4A4 cotransporter activity stimulation). VAR_024749 
VARIANT   219   219  1     R -> S (in RP17; no catalytic activity. Impaired SLC4A4 cotransporter activity stimulation). VAR_024750 
MUTAGEN   284   284        S->F: Loss of C-terminal domain removal and inactivation. 
CONFLICT   24    24        C -> E (in Ref. 4; AA sequence). 
HELIX   26    31  6      
HELIX   39    41  3      
HELIX   44    47  4      
STRAND   48    50  3      
HELIX   58    60  3      
STRAND   61    63  3      
STRAND   70    74  5      
STRAND   79    85  7      
STRAND   87    93  7      
STRAND   99   102  4      
STRAND   109   118  10      
STRAND   127   130  4      
STRAND   136   147  12      
STRAND   162   175  14      
TURN   178   180  3      
HELIX   181   186  6      
HELIX   187   189  3      
STRAND   196   202  7      
HELIX   204   206  3      
HELIX   211   215  5      
STRAND   217   222  6      
STRAND   233   240  8      
STRAND   242   245  4      
HELIX   246   255  10      
STRAND   257   259  3      
Sequence information
Length: 312 AA [This is the length of the unprocessed precursor] Molecular weight: 35032 Da [This is the MW of the unprocessed precursor] CRC64: EF5F182474ABE9B0 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRMLLALLAL SAARPSASAE SHWCYEVQAE SSNYPCLVPV KWGGNCQKDR QSPINIVTTK 

        70         80         90        100        110        120 
AKVDKKLGRF FFSGYDKKQT WTVQNNGHSV MMLLENKASI SGGGLPAPYQ AKQLHLHWSD 

       130        140        150        160        170        180 
LPYKGSEHSL DGEHFAMEMH IVHEKEKGTS RNVKEAQDPE DEIAVLAFLV EAGTQVNEGF 

       190        200        210        220        230        240 
QPLVEALSNI PKPEMSTTMA ESSLLDLLPK EEKLRHYFRY LGSLTTPTCD EKVVWTVFRE 

       250        260        270        280        290        300 
PIQLHREQIL AFSQKLYYDK EQTVSMKDNV RPLQQLGQRT VIKSGAPGRP LPWALPALLG 

       310 
PMLACLLAGF LR 

P22748 in FASTA format

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