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UniProtKB/Swiss-Prot entry P22734


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name COMT_RAT
Primary accession number P22734
Secondary accession numbers None
Integrated into Swiss-Prot on August 1, 1991
Sequence was last modified on May 1, 1992 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 95)
Name and origin of the protein
Protein name Catechol O-methyltransferase
Synonym EC 2.1.1.6
Gene name
Name: Comt
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND ALTERNATIVE INITIATION.
TISSUE=Liver;
PubMed=8280056 [NCBI, ExPASy, EBI, Israel, Japan]
Tenhunen J., Ulmanen I.;
"Production of rat soluble and membrane-bound catechol O-methyltransferase forms from bifunctional mRNAs.";
Biochem. J. 296:595-600(1993).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
TISSUE=Heart;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] OF 11-264.
DOI=10.1016/0378-1119(90)90231-F; PubMed=2227437 [NCBI, ExPASy, EBI, Israel, Japan]
Salminen M., Lundstroem K., Tilgmann C., Savolainen R., Kalkkinen N., Ulmanen I.;
"Molecular cloning and characterization of rat liver catechol-O-methyltransferase.";
Gene 93:241-247(1990).
[4]
NUCLEOTIDE SEQUENCE [MRNA] OF 1-10, AND CHARACTERIZATION OF THE TWO FORMS.
PubMed=1765063 [NCBI, ExPASy, EBI, Israel, Japan]
Ulmanen I., Lundstroem K.;
"Cell-free synthesis of rat and human catechol O-methyltransferase. Insertion of the membrane-bound form into microsomal membranes in vitro.";
Eur. J. Biochem. 202:1013-1020(1991).
[5]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-260, AND MASS SPECTROMETRY.
TISSUE=Liver;
DOI=10.1021/pr0503073; PubMed=16396499 [NCBI, ExPASy, EBI, Israel, Japan]
Moser K., White F.M.;
"Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.";
J. Proteome Res. 5:98-104(2006).
[6]
X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS) OF 44-264.
DOI=10.1038/368354a0; PubMed=8127373 [NCBI, ExPASy, EBI, Israel, Japan]
Vidgren J., Svensson L.A., Liljas A.;
"Crystal structure of catechol O-methyltransferase.";
Nature 368:354-358(1994).
[7]
X-RAY CRYSTALLOGRAPHY (2.63 ANGSTROMS) OF 44-264 IN COMPLEX WITH SUBSTRATE ANALOG.
PubMed=10785817 [NCBI, ExPASy, EBI, Israel, Japan]
Masjost B., Ballmer P., Borroni E., Zuercher G., Winkler F.K., Jakob-Roetne R., Diederich F.;
"Structure-based design, synthesis, and in vitro evaluation of bisubstrate inhibitors for catechol O-methyltransferase (COMT).";
Chemistry 6:971-982(2000).
[8]
X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS) OF 44-264 IN COMPLEX WITH S-ADENOSYL-L-METHIONINE AND SUBSTRATE ANALOG.
DOI=10.1124/mol.62.4.795; PubMed=12237326 [NCBI, ExPASy, EBI, Israel, Japan]
Bonifacio M.J., Archer M., Rodrigues M.L., Matias P.M., Learmonth D.A., Carrondo M.A., Soares-da-Silva P.;
"Kinetics and crystal structure of catechol-O-methyltransferase complex with co-substrate and a novel inhibitor with potential therapeutic application.";
Mol. Pharmacol. 62:795-805(2002).
[9]
X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS) OF 44-264 IN COMPLEX WITH SUBSTRATE ANALOG, AND BIOPHYSICOCHEMICAL PROPERTIES.
DOI=10.1124/mol.106.023119; PubMed=16618795 [NCBI, ExPASy, EBI, Israel, Japan]
Palma P.N., Rodrigues M.L., Archer M., Bonifacio M.J., Loureiro A.I., Learmonth D.A., Carrondo M.A., Soares-da-Silva P.;
"Comparative study of ortho- and meta-nitrated inhibitors of catechol-O-methyltransferase: interactions with the active site and regioselectivity of O-methylation.";
Mol. Pharmacol. 70:143-153(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z12651; CAA78276.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M60754; AAA40882.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC081850; AAH81850.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M60753; AAA40881.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S22090; S22090.
RefSeq NP_036663.1; -.
UniGene Rn.220
3D structure databases
PDB
1H1D; X-ray; 2.00 A; A=44-264.[ExPASy / RCSB / EBI]
1JR4; X-ray; 2.63 A; A=44-264.[ExPASy / RCSB / EBI]
1VID; X-ray; 2.00 A; A=44-264.[ExPASy / RCSB / EBI]
2CL5; X-ray; 1.60 A; A/B=44-264.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1H1D; -.
1JR4; -.
1VID; -.
2CL5; -.
ModBase P22734.
PTM databases
PhosphoSite P22734; -.
Organism-specific databases
RGD 2379; Comt.
Gene expression databases
ArrayExpress P22734; -.
GermOnline ENSRNOG00000001889; Rattus norvegicus.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from UniProtKB-KW).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0016206; Molecular function: catechol O-methyltransferase activity (inferred from electronic annotation from EC).
GO:0000287; Molecular function: magnesium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0042135; Biological process: neurotransmitter catabolic process (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR017128; Catechol_O-MeTrfase_euk.
IPR002935; O-MeTrfase_3.
Graphical view of domain structure.
PANTHER PTHR10509; Methyltransf_3; 1.
Pfam PF01596; Methyltransf_3; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF037177; Catechol_O-mtfrase_euk; 1.
ProtoNet P22734.
Genome annotation databases
Ensembl ENSRNOG00000001889; Rattus norvegicus. [Contig view]
GeneID 24267; -.
KEGG rno:24267; -.
Phylogenomic databases
HOVERGEN P22734; -.
Other
LinkHub P22734; -.
NextBio 602825; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Alternative initiation; Catecholamine metabolism; Cell membrane; Cytoplasm; Magnesium; Membrane; Metal-binding; Methyltransferase; Neurotransmitter degradation; Phosphoprotein; S-adenosyl-L-methionine; Signal-anchor; Transferase; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   264  264     Catechol O-methyltransferase. PRO_0000020975
TRANSMEM   3    19  17     Signal-anchor for type II membrane protein (Potential). 
REGION   160   163  4     S-adenosyl-L-methionine binding. 
METAL   184   184        Magnesium. 
METAL   212   212        Magnesium. 
METAL   213   213        Magnesium. 
BINDING   85    85        S-adenosyl-L-methionine; via amide nitrogen. 
BINDING   115   115        S-adenosyl-L-methionine. 
BINDING   133   133        S-adenosyl-L-methionine. 
BINDING   184   184        S-adenosyl-L-methionine. 
BINDING   187   187        Substrate. 
BINDING   213   213        Substrate. 
BINDING   242   242        Substrate. 
MOD_RES   260   260        Phosphoserine. 
VAR_SEQ   1    43        Missing (in isoform 2). VSP_018780
HELIX   48    59  12      
HELIX   65    78  14      
HELIX   86   100  15      
STRAND   103   108  6      
HELIX   114   120  7      
STRAND   128   133  6      
HELIX   136   149  14      
TURN   152   154  3      
STRAND   155   160  6      
HELIX   162   165  4      
HELIX   166   168  3      
HELIX   169   173  5      
STRAND   179   183  5      
HELIX   187   189  3      
HELIX   190   199  10      
STRAND   208   212  5      
HELIX   214   218  5      
HELIX   220   228  9      
STRAND   232   240  9      
STRAND   244   255  12      
Sequence information
Length: 264 AA [This is the length of the unprocessed precursor] Molecular weight: 29597 Da [This is the MW of the unprocessed precursor] CRC64: F535DFF49C062854 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPLAAVSLGL LLLALLLLLR HLGWGLVTIF WFEYVLQPVH NLIMGDTKEQ RILRYVQQNA 

        70         80         90        100        110        120 
KPGDPQSVLE AIDTYCTQKE WAMNVGDAKG QIMDAVIREY SPSLVLELGA YCGYSAVRMA 

       130        140        150        160        170        180 
RLLQPGARLL TMEMNPDYAA ITQQMLNFAG LQDKVTILNG ASQDLIPQLK KKYDVDTLDM 

       190        200        210        220        230        240 
VFLDHWKDRY LPDTLLLEKC GLLRKGTVLL ADNVIVPGTP DFLAYVRGSS SFECTHYSSY 

       250        260 
LEYMKVVDGL EKAIYQGPSS PDKS 

P22734 in FASTA format

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