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UniProtKB/Swiss-Prot entry P22392


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NDKB_HUMAN
Primary accession number P22392
Secondary accession numbers None
Integrated into Swiss-Prot on August 1, 1991
Sequence was last modified on August 1, 1991 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 104)
Name and origin of the protein
Protein name Nucleoside diphosphate kinase B
Synonyms NDP kinase B
NDK B
EC 2.7.4.6
nm23-H2
C-myc purine-binding transcription factor PUF
Gene name
Name: NME2
Synonyms: NM23B
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
PROTEIN SEQUENCE, SUBUNIT, AND ACTIVE SITE.
PubMed=1851158 [NCBI, ExPASy, EBI, Israel, Japan]
Gilles A.-M., Presecan E., Vonica A., Lascu I.;
"Nucleoside diphosphate kinase from human erythrocytes. Structural characterization of the two polypeptide chains responsible for heterogeneity of the hexameric enzyme.";
J. Biol. Chem. 266:8784-8789(1991).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=1988104 [NCBI, ExPASy, EBI, Israel, Japan]
Stahl J.A., Leone A., Rosengard A.M., Porter L., Liotta L.A., Steeg P.S., King C.R.;
"Identification of a second human nm23 gene, nm23-H2.";
Cancer Res. 51:445-449(1991).
[3]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=8392752 [NCBI, ExPASy, EBI, Israel, Japan]
Postel E.H., Berberich S.J., Flint S.J., Ferrone C.A.;
"Human c-myc transcription factor PuF identified as nm23-H2 nucleoside diphosphate kinase, a candidate suppressor of tumor metastasis.";
Science 261:478-480(1993).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Eye;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
FUNCTION, AND INTERACTION WITH AKAP13.
DOI=10.1016/j.bbrc.2004.06.067; PubMed=15249197 [NCBI, ExPASy, EBI, Israel, Japan]
Iwashita S., Fujii M., Mukai H., Ono Y., Miyamoto M.;
"Lbc proto-oncogene product binds to and could be negatively regulated by metastasis suppressor nm23-H2.";
Biochem. Biophys. Res. Commun. 320:1063-1068(2004).
[6]
X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS).
DOI=10.1006/jmbi.1995.0457; PubMed=7658474 [NCBI, ExPASy, EBI, Israel, Japan]
Webb P.A., Perisic O., Mendola C.E., Backer J.M., Williams R.L.;
"The crystal structure of a human nucleoside diphosphate kinase, NM23-H2.";
J. Mol. Biol. 251:574-587(1995).
[7]
X-RAY CRYSTALLOGRAPHY (2 ANGSTROMS).
DOI=10.1016/S0969-2126(01)00268-4; PubMed=8747457 [NCBI, ExPASy, EBI, Israel, Japan]
Morera S., Lacombe M.-L., Xu Y., Lebras G., Janin J.;
"X-ray structure of human nucleoside diphosphate kinase B complexed with GDP at 2-A resolution.";
Structure 3:1307-1314(1995).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X58965; CAB37870.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M36981; AAA36369.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L16785; AAA60228.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC002476; AAH02476.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A49798; A49798.
RefSeq NP_001018146.1; -.
NP_001018147.1; -.
NP_001018148.1; -.
NP_001018149.1; -.
NP_002503.1; -.
UniGene Hs.463456
3D structure databases
PDB
1NSK; X-ray; 2.80 A; L/N/O/R/T/U=1-152.[ExPASy / RCSB / EBI]
1NUE; X-ray; 2.00 A; A/B/C/D/E/F=2-152.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1NSK; -.
1NUE; -.
ModBase P22392.
Protein-protein interaction databases
IntAct P22392; -.
PTM databases
PhosphoSite P22392; -.
Enzyme and pathway databases
Reactome REACT_1698; Nucleotide metabolism.
2D gel databases
DOSAC-COBS-2DPAGE P22392; -.
OGP P22392; -.
Organism-specific databases
H-InvDB HIX0013992; -.
HIX0036862; -.
HGNC HGNC:7850; NME2.
GenAtlas NME2.
MIM 156491; gene. [NCBI / EBI]
PharmGKB PA250; -.
GeneCards P22392.
Gene expression databases
ArrayExpress P22392; -.
GermOnline ENSG00000011052; Homo sapiens.
Ontologies
GO
GO:0030027; Cellular component: lamellipodium (inferred from direct assay from HGNC).
GO:0005634; Cellular component: nucleus (non-traceable author statement from UniProtKB).
GO:0001726; Cellular component: ruffle (inferred from direct assay from HGNC).
GO:0005524; Molecular function: ATP binding (non-traceable author statement from UniProtKB).
GO:0004550; Molecular function: nucleoside diphosphate kinase activity (traceable author statement from UniProtKB).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
GO:0003700; Molecular function: transcription factor activity (traceable author statement from UniProtKB).
GO:0007155; Biological process: cell adhesion (traceable author statement from HGNC).
GO:0043066; Biological process: negative regulation of apoptosis (inferred from mutant phenotype from HGNC).
GO:0008285; Biological process: negative regulation of cell proliferation (traceable author statement from UniProtKB).
GO:0009142; Biological process: nucleoside triphosphate biosynthetic process (non-traceable author statement from UniProtKB).
GO:0050679; Biological process: positive regulation of epithelial cell proliferation (inferred from mutant phenotype from HGNC).
GO:0045618; Biological process: positive regulation of keratinocyte differentiation (inferred from mutant phenotype from HGNC).
GO:0045682; Biological process: regulation of epidermis development (inferred from mutant phenotype from HGNC).
GO:0006355; Biological process: regulation of transcription, DNA-dependent (traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR001564; Nuc_diP_kinase_core.
Graphical view of domain structure.
Gene3D G3DSA:3.30.70.141; NDK; 1.
PANTHER PTHR11349; Nuc_diP_kinase_core; 1.
Pfam PF00334; NDK; 1.
Pfam graphical view of domain structure.
PRINTS PR01243; NUCDPKINASE.
ProDom PD001018; NDK; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00562; NDK; 1.
SMART graphical view of domain structure.
PROSITE PS00469; NDP_KINASES; 1.
BLOCKS P22392.
Genome annotation databases
Ensembl ENSG00000011052; Homo sapiens. [Contig view]
GeneID 4831; -.
654364; -.
KEGG hsa:4831; -.
hsa:654364; -.
Phylogenomic databases
HOVERGEN P22392; -.
Other
LinkHub P22392; -.
SOURCE NME2; Homo sapiens.
ProtoNet P22392.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Activator; Anti-oncogene; ATP-binding; Cell cycle; Cytoplasm; Direct protein sequencing; DNA-binding; Kinase; Magnesium; Metal-binding; Nucleotide metabolism; Nucleotide-binding; Nucleus; Phosphoprotein; Transcription; Transcription regulation; Transferase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   152  152     Nucleoside diphosphate kinase B. PRO_0000137117
REGION   1    66  66     Interaction with AKAP13. 
ACT_SITE   118   118        Pros-phosphohistidine intermediate. 
BINDING   12    12        ATP. 
BINDING   60    60        ATP. 
BINDING   88    88        ATP. 
BINDING   94    94        ATP. 
BINDING   105   105        ATP. 
BINDING   115   115        ATP. 
STRAND   6    11  6      
HELIX   13    17  5      
HELIX   21    31  11      
STRAND   34    41  8      
HELIX   45    51  7      
HELIX   53    55  3      
HELIX   61    69  9      
STRAND   73    79  7      
HELIX   83    91  9      
HELIX   96    98  3      
HELIX   104   108  5      
HELIX   112   114  3      
STRAND   117   119  3      
HELIX   123   133  11      
HELIX   136   138  3      
HELIX   147   150  4      
Sequence information
Length: 152 AA [This is the length of the unprocessed precursor] Molecular weight: 17298 Da [This is the MW of the unprocessed precursor] CRC64: 1A5C3F84D7AD272C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MANLERTFIA IKPDGVQRGL VGEIIKRFEQ KGFRLVAMKF LRASEEHLKQ HYIDLKDRPF 

        70         80         90        100        110        120 
FPGLVKYMNS GPVVAMVWEG LNVVKTGRVM LGETNPADSK PGTIRGDFCI QVGRNIIHGS 

       130        140        150 
DSVKSAEKEI SLWFKPEELV DYKSCAHDWV YE 

P22392 in FASTA format

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