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UniProtKB/Swiss-Prot entry P21874


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ODPB_BACST
Primary accession number P21874
Secondary accession numbers None
Integrated into Swiss-Prot on May 1, 1991
Sequence was last modified on January 23, 2007 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 66)
Name and origin of the protein
Protein name Pyruvate dehydrogenase E1 component subunit beta
Synonym EC 1.2.4.1
Gene name
Name: pdhB
From
Bacillus stearothermophilus (Geobacillus stearothermophilus) [TaxID: 1422] 
Taxonomy Bacteria; Firmicutes; Bacillales; Bacillaceae; Geobacillus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PARTIAL PROTEIN SEQUENCE.
STRAIN=ATCC 29609 / DSM 2027 / NCA 1503 / NCIB 8924;
PubMed=2200674 [NCBI, ExPASy, EBI, Israel, Japan]
Hawkins C.F., Borges A., Perham R.N.;
"Cloning and sequence analysis of the genes encoding the alpha and beta subunits of the E1 component of the pyruvate dehydrogenase multienzyme complex of Bacillus stearothermophilus.";
Eur. J. Biochem. 191:337-346(1990).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=2253629 [NCBI, ExPASy, EBI, Israel, Japan]
Borges A., Hawkins C.F., Packman L.C., Perham R.N.;
"Cloning and sequence analysis of the genes encoding the dihydrolipoamide acetyltransferase and dihydrolipoamide dehydrogenase components of the pyruvate dehydrogenase multienzyme complex of Bacillus stearothermophilus.";
Eur. J. Biochem. 194:95-102(1990).
Comments
  • FUNCTION: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
  • CATALYTIC ACTIVITY: Pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine + CO2.
  • COFACTOR: Thiamine pyrophosphate.
  • SUBUNIT: Heterodimer of an alpha and a beta chain.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X53560; CAA37629.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S14230; S14230.
3D structure databases
PDB
1W85; X-ray; 2.00 A; B/D/F/H=1-325.[ExPASy / RCSB / EBI]
1W88; X-ray; 2.30 A; B/D/F/H=1-325.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1W85; -.
1W88; -.
ModBase P21874.
Ontologies
GO
GO:0004739; Molecular function: pyruvate dehydrogenase (acetyl-transferring) activity (inferred from electronic annotation from EC).
GO:0006096; Biological process: glycolysis (inferred from electronic annotation from UniProtKB-KW).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR005476; Transketo_C.
IPR005475; Transketo_Cen_R.
IPR015941; Transketolase_C-like.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.920; Transketo_C_like; 1.
Pfam PF02779; Transket_pyr; 1.
PF02780; Transketolase_C; 1.
Pfam graphical view of domain structure.
ProtoNet P21874.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Direct protein sequencing; Glycolysis; Oxidoreductase; Pyruvate; Thiamine pyrophosphate.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   325  324     Pyruvate dehydrogenase E1 component subunit beta. PRO_0000162221
BINDING   60    60        Thiamine pyrophosphate (By similarity). 
HELIX   6    20  15      
STRAND   24    28  5      
TURN   40    43  4      
HELIX   44    48  5      
TURN   50    52  3      
STRAND   53    55  3      
HELIX   60    72  13      
STRAND   76    80  5      
HELIX   84    89  6      
HELIX   91    95  5      
HELIX   98   100  3      
HELIX   101   104  4      
TURN   105   107  3      
STRAND   114   119  6      
STRAND   121   123  3      
HELIX   134   137  4      
STRAND   144   146  3      
HELIX   151   163  13      
STRAND   164   166  3      
STRAND   168   173  6      
TURN   174   176  3      
STRAND   177   179  3      
STRAND   197   200  4      
STRAND   203   209  7      
HELIX   213   226  14      
STRAND   231   235  5      
STRAND   237   241  5      
HELIX   244   254  11      
STRAND   257   264  8      
STRAND   267   269  3      
HELIX   270   281  12      
HELIX   282   284  3      
STRAND   290   294  5      
STRAND   296   299  4      
HELIX   302   304  3      
HELIX   305   308  4      
HELIX   312   323  12      
Sequence information
Length: 325 AA [This is the length of the unprocessed precursor] Molecular weight: 35460 Da [This is the MW of the unprocessed precursor] CRC64: AD1F2D4F82D652AC [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAQMTMVQAI TDALRIELKN DPNVLIFGED VGVNGGVFRA TEGLQAEFGE DRVFDTPLAE 

        70         80         90        100        110        120 
SGIGGLAIGL ALQGFRPVPE IQFFGFVYEV MDSICGQMAR IRYRTGGRYH MPITIRSPFG 

       130        140        150        160        170        180 
GGVHTPELHS DSLEGLVAQQ PGLKVVIPST PYDAKGLLIS AIRDNDPVIF LEHLKLYRSF 

       190        200        210        220        230        240 
RQEVPEGEYT IPIGKADIKR EGKDITIIAY GAMVHESLKA AAELEKEGIS AEVVDLRTVQ 

       250        260        270        280        290        300 
PLDIETIIGS VEKTGRAIVV QEAQRQAGIA ANVVAEINER AILSLEAPVL RVAAPDTVYP 

       310        320 
FAQAESVWLP NFKDVIETAK KVMNF 

P21874 in FASTA format

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