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UniProtKB/Swiss-Prot entry P16949


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name STMN1_HUMAN
Primary accession number P16949
Secondary accession number A2A2D1
Integrated into Swiss-Prot on August 1, 1990
Sequence was last modified on January 23, 2007 (Sequence version 3)
Annotations were last modified on    June 16, 2009 (Entry version 105)
Name and origin of the protein
Protein name Stathmin
Synonyms Phosphoprotein p19
pp19
Leukemia-associated phosphoprotein p18
Oncoprotein 18
Op18
pp17
Prosolin
Metablastin
Protein Pr22
Gene name
Name: STMN1
Synonyms: LAP18, OP18
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND PROTEIN SEQUENCE OF 45-61.
PubMed=2760073 [NCBI, ExPASy, EBI, Israel, Japan]
Zhu X.-X., Kozarsky K., Strahler J.R., Eckerskorn C., Lottspeich F., Melhem R., Lowe J., Fox D.A., Hanash S.M., Atweh G.F.;
"Molecular cloning of a novel human leukemia-associated gene. Evidence of conservation in animal species.";
J. Biol. Chem. 264:14556-14560(1989).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1016/0014-5793(90)80266-L; PubMed=2358074 [NCBI, ExPASy, EBI, Israel, Japan]
Maucuer A., Doye V., Sobel A.;
"A single amino acid difference distinguishes the human and the rat sequences of stathmin, a ubiquitous intracellular phosphoprotein associated with cell regulations.";
FEBS Lett. 264:275-278(1990).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=1917919 [NCBI, ExPASy, EBI, Israel, Japan]
Melhem R.F., Zhu X., Hailat N., Strahler J.R., Hanash S.M.;
"Characterization of the gene for a proliferation-related phosphoprotein (oncoprotein 18) expressed in high amounts in acute leukemia.";
J. Biol. Chem. 266:17747-17753(1991).
[4]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=8906359 [NCBI, ExPASy, EBI, Israel, Japan]
Hosoya H., Ishikawa K., Dohi N., Marunouchi T.;
"Transcriptional and post-transcriptional regulation of pr22 (Op18) with proliferation control.";
Cell Struct. Funct. 21:237-243(1996).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/nature04727; PubMed=16710414 [NCBI, ExPASy, EBI, Israel, Japan]
Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K., Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.;
"The DNA sequence and biological annotation of human chromosome 1.";
Nature 441:315-321(2006).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Lung;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[7]
PROTEIN SEQUENCE OF 14-41 AND 44-52, AND MASS SPECTROMETRY.
TISSUE=Brain, Cajal-Retzius cell, and Fetal brain cortex;
Lubec G., Vishwanath V., Chen W.-Q., Sun Y.;
Submitted (DEC-2008) to UniProtKB.
[8]
PROTEIN SEQUENCE OF 87-96.
PubMed=2546936 [NCBI, ExPASy, EBI, Israel, Japan]
Hanash S.M., Strahler J.R., Kuick R., Chu E.H.Y., Nichols D.;
"Ca2+-dependent and cAMP-dependent control of nicotinic acetylcholine receptor phosphorylation in muscle cells.";
J. Biol. Chem. 264:12813-12819(1989).
[9]
ACETYLATION AT ALA-2, PHOSPHORYLATION AT SER-25 AND SER-38, AND MASS SPECTROMETRY.
PubMed=1737801 [NCBI, ExPASy, EBI, Israel, Japan]
Labdon J.E., Nieves E., Schubart U.K.;
"Analysis of phosphoprotein p19 by liquid chromatography/mass spectrometry. Identification of two proline-directed serine phosphorylation sites and a blocked amino terminus.";
J. Biol. Chem. 267:3506-3513(1992).
[10]
PHOSPHORYLATION AT SER-25 AND SER-38.
PubMed=8325880 [NCBI, ExPASy, EBI, Israel, Japan]
Marklund U., Brattsand G., Shingler V., Gullberg M.;
"Serine 25 of oncoprotein 18 is a major cytosolic target for the mitogen-activated protein kinase.";
J. Biol. Chem. 268:15039-15047(1993).
[11]
PHOSPHORYLATION AT SER-16; SER-25 AND SER-38.
PubMed=8245003 [NCBI, ExPASy, EBI, Israel, Japan]
Marklund U., Brattsand G., Osterman O., Ohlsson P.-I., Gullberg M.;
"Multiple signal transduction pathways induce phosphorylation of serines 16, 25, and 38 of oncoprotein 18 in T lymphocytes.";
J. Biol. Chem. 268:25671-25680(1993).
[12]
PHOSPHORYLATION AT SER-16; SER-25 AND SER-38.
DOI=10.1111/j.1432-1033.1994.tb18632.x; PubMed=8125092 [NCBI, ExPASy, EBI, Israel, Japan]
Brattsand G., Marklund U., Nylander K., Roos G., Gullberg M.;
"Cell-cycle-regulated phosphorylation of oncoprotein 18 on Ser16, Ser25 and Ser38.";
Eur. J. Biochem. 220:359-368(1994).
[13]
INTERACTION WITH TUBULIN.
DOI=10.1093/emboj/19.4.572; PubMed=10675326 [NCBI, ExPASy, EBI, Israel, Japan]
Steinmetz M.O., Kammerer R.A., Jahnke W., Goldie K.N., Lustig A., van Oostrum J.;
"Op18/stathmin caps a kinked protofilament-like tubulin tetramer.";
EMBO J. 19:572-580(2000).
[14]
INTERACTION WITH TUBULIN.
DOI=10.1074/jbc.275.10.6841; PubMed=10702243 [NCBI, ExPASy, EBI, Israel, Japan]
Redeker V., Lachkar S., Siavoshian S., Charbaut E., Rossier J., Sobel A., Curmi P.A.;
"Probing the native structure of stathmin and its interaction domains with tubulin. Combined use of limited proteolysis, size exclusion chromatography, and mass spectrometry.";
J. Biol. Chem. 275:6841-6849(2000).
[15]
EFFECT OF PHOSPHORYLATION AT SER-63 ON TUBULIN BINDING.
DOI=10.1093/embo-reports/kve105; PubMed=11415983 [NCBI, ExPASy, EBI, Israel, Japan]
Steinmetz M.O., Jahnke W., Towbin H., Garcia-Echeverria C., Voshol H., Mueller D., van Oostrum J.;
"Phosphorylation disrupts the central helix in Op18/stathmin and suppresses binding to tubulin.";
EMBO Rep. 2:505-510(2001).
[16]
TISSUE SPECIFICITY.
DOI=10.1016/S0888-7543(03)00031-4; PubMed=12676564 [NCBI, ExPASy, EBI, Israel, Japan]
Bieche I., Maucuer A., Laurendeau I., Lachkar S., Spano A.J., Frankfurter A., Levy P., Manceau V., Sobel A., Vidaud M., Curmi P.A.;
"Expression of stathmin family genes in human tissues: non-neural-restricted expression for SCLIP.";
Genomics 81:400-410(2003).
[17]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-25, AND MASS SPECTROMETRY.
DOI=10.1021/pr050048h; PubMed=16083285 [NCBI, ExPASy, EBI, Israel, Japan]
Kim J.-E., Tannenbaum S.R., White F.M.;
"Global phosphoproteome of HT-29 human colon adenocarcinoma cells.";
J. Proteome Res. 4:1339-1346(2005).
[18]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-25, AND MASS SPECTROMETRY.
TISSUE=T-cell;
DOI=10.1038/nmeth776; PubMed=16094384 [NCBI, ExPASy, EBI, Israel, Japan]
Tao W.A., Wollscheid B., O'Brien R., Eng J.K., Li X.-J., Bodenmiller B., Watts J.D., Hood L., Aebersold R.;
"Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry.";
Nat. Methods 2:591-598(2005).
[19]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-16; SER-25; SER-38 AND SER-63, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1016/j.cell.2006.09.026; PubMed=17081983 [NCBI, ExPASy, EBI, Israel, Japan]
Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M.;
"Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.";
Cell 127:635-648(2006).
[20]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-16; SER-25 AND SER-38, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1038/nbt1240; PubMed=16964243 [NCBI, ExPASy, EBI, Israel, Japan]
Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P.;
"A probability-based approach for high-throughput protein phosphorylation analysis and site localization.";
Nat. Biotechnol. 24:1285-1292(2006).
[21]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-16; SER-25; SER-38 AND SER-63, AND MASS SPECTROMETRY.
TISSUE=Epithelium;
DOI=10.1021/pr070152u; PubMed=17924679 [NCBI, ExPASy, EBI, Israel, Japan]
Yu L.-R., Zhu Z., Chan K.C., Issaq H.J., Dimitrov D.S., Veenstra T.D.;
"Improved titanium dioxide enrichment of phosphopeptides from HeLa cells and high confident phosphopeptide identification by cross-validation of MS/MS and MS/MS/MS spectra.";
J. Proteome Res. 6:4150-4162(2007).
[22]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-16; SER-25 AND SER-38, AND MASS SPECTROMETRY.
DOI=10.1074/mcp.M700120-MCP200; PubMed=17693683 [NCBI, ExPASy, EBI, Israel, Japan]
Tang L.-Y., Deng N., Wang L.-S., Dai J., Wang Z.-L., Jiang X.-S., Li S.-J., Li L., Sheng Q.-H., Wu D.-Q., Li L., Zeng R.;
"Quantitative phosphoproteome profiling of Wnt3a-mediated signaling network: indicating the involvement of ribonucleoside-diphosphate reductase M2 subunit phosphorylation at residue serine 20 in canonical Wnt signal transduction.";
Mol. Cell. Proteomics 6:1952-1967(2007).
[23]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-16; SER-25; SER-28; SER-38; SER-63 AND THR-146, AND MASS SPECTROMETRY.
DOI=10.1073/pnas.0611217104; PubMed=17287340 [NCBI, ExPASy, EBI, Israel, Japan]
Molina H., Horn D.M., Tang N., Mathivanan S., Pandey A.;
"Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry.";
Proc. Natl. Acad. Sci. U.S.A. 104:2199-2204(2007).
[24]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-38, AND MASS SPECTROMETRY.
DOI=10.2116/analsci.24.161; PubMed=18187866 [NCBI, ExPASy, EBI, Israel, Japan]
Imami K., Sugiyama N., Kyono Y., Tomita M., Ishihama Y.;
"Automated phosphoproteome analysis for cultured cancer cells by two-dimensional nanoLC-MS using a calcined titania/C18 biphasic column.";
Anal. Sci. 24:161-166(2008).
[25]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-16 AND SER-25, AND MASS SPECTROMETRY.
DOI=10.1021/pr0705441; PubMed=18220336 [NCBI, ExPASy, EBI, Israel, Japan]
Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III;
"Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis.";
J. Proteome Res. 7:1346-1351(2008).
[26]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-16; SER-25; SER-38 AND SER-63, AND MASS SPECTROMETRY.
DOI=10.1073/pnas.0805139105; PubMed=18669648 [NCBI, ExPASy, EBI, Israel, Japan]
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P.;
"A quantitative atlas of mitotic phosphorylation.";
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
[27]
IDENTIFICATION [LARGE SCALE ANALYSIS], AND MASS SPECTROMETRY.
Colinge J., Superti-Furga G., Bennett K.L.;
Submitted (OCT-2008) to UniProtKB.
Comments
  • FUNCTION: Involved in the regulation of the microtubule (MT) filament system by destabilizing microtubules. Prevents assembly and promotes disassembly of microtubules. Phosphorylation at Ser-16 may be required for axon formation during neurogenesis. Involved in the control of the learned and innate fear (By similarity).
  • SUBUNIT: Binds to two alpha/beta-tubulin heterodimers. Interacts with KIST.
  • INTERACTION:
    P46527:CDKN1B; NbExp=1; IntAct=EBI-445909, EBI-519280;
  • SUBCELLULAR LOCATION: Cytoplasm.
  • TISSUE SPECIFICITY: Ubiquitous. Expression is strongest in fetal and adult brain, spinal cord, and cerebellum, followed by thymus, bone marrow, testis, and fetal liver. Expression is intermediate in colon, ovary, placenta, uterus, and trachea, and is readily detected at substantially lower levels in all other tissues examined. Lowest expression is found in adult liver.
  • PTM: Many different phosphorylated forms are observed depending on specific combinations among the sites which can be phosphorylated. MAPK is responsible for the phosphorylation of stathmin in response to NGF. Phosphorylation at Ser-16 seems to be required for neuron polarization (By similarity). Phosphorylation at Ser-63 reduces tubulin binding 10-fold and suppresses the MT polymerization inhibition activity.
  • DISEASE: Present in much greater abundance in cells from patients with acute leukemia of different subtypes than in normal peripheral blood lymphocytes, non-leukemic proliferating lymphoid cells, bone marrow cells, or cells from patients with chronic lymphoid or myeloid leukemia.
  • SIMILARITY: Belongs to the stathmin family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
J04991; AAA59980.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M31303; AAA59971.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X53305; CAA37391.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z11566; CAA77660.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X94912; CAA64398.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL033528; CAC16020.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC082228; AAH82228.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00479997; -.
PIR A40936; A40936.
RefSeq NP_005554.1; -.
NP_981944.1; -.
NP_981946.1; -.
UniGene Hs.209983
3D structure databases
DisProt DP00174; -.
ModBase P16949.
Protein-protein interaction databases
IntAct P16949; 5.
PTM databases
PhosphoSite P16949; -.
Enzyme and pathway databases
Pathway_Interaction_DB aurora_b_pathway; Aurora B signaling.
p38gammadeltapathway; Signaling mediated by p38-gamma and p38-delta.
2D gel databases
SWISS-2DPAGE P16949; -.
DOSAC-COBS-2DPAGE P16949; -.
REPRODUCTION-2DPAGE IPI00479997; -.
Organism-specific databases
GeneCards GC01M026099; -.
H-InvDB HIX0000281; -.
HGNC HGNC:6510; STMN1.
GenAtlas STMN1.
HPA CAB010107; -.
MIM 151442; gene. [NCBI / EBI]
PharmGKB PA35491; -.
Gene expression databases
ArrayExpress P16949; -.
Bgee P16949; -.
CleanEx HS_STMN1; -.
GermOnline ENSG00000117632; Homo sapiens.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from UniProtKB-SubCell).
GO:0005874; Cellular component: microtubule (inferred from electronic annotation from UniProtKB-KW).
GO:0004871; Molecular function: signal transducer activity (traceable author statement from ProtInc).
GO:0015631; Molecular function: tubulin binding (inferred from direct assay from MGI).
GO:0030154; Biological process: cell differentiation (inferred from electronic annotation from UniProtKB-KW).
GO:0007242; Biological process: intracellular signaling cascade (traceable author statement from ProtInc).
GO:0007019; Biological process: microtubule depolymerization (inferred from direct assay from MGI).
GO:0007052; Biological process: mitotic spindle organization (inferred from direct assay from MGI).
GO:0007399; Biological process: nervous system development (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR000956; Stathmin.
Graphical view of domain structure.
PANTHER PTHR10104; Stathmin; 1.
Pfam PF00836; Stathmin; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF002285; Stathmin; 1.
PRINTS PR00345; STATHMIN.
PROSITE PS00563; STATHMIN_1; 1.
PS01041; STATHMIN_2; 1.
Proteomic databases
PeptideAtlas P16949; -.
PRIDE P16949; -.
Genome annotation databases
Ensembl ENSG00000117632; Homo sapiens. [Contig view]
GeneID 3925; -.
KEGG hsa:3925; -.
Phylogenomic databases
HOGENOM P16949; -.
HOVERGEN P16949; -.
OMA P16949; KEAVPEF.
Other
NextBio 15415; -.
SOURCE STMN1; Homo sapiens.
ProtoNet P16949.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Acetylation; Coiled coil; Cytoplasm; Developmental protein; Differentiation; Direct protein sequencing; Microtubule; Neurogenesis; Phosphoprotein.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   149  148     Stathmin. PRO_0000182389
COILED   41   140  100     Potential. 
MOD_RES   2     2        N-acetylalanine. 
MOD_RES   16    16        Phosphoserine. 
MOD_RES   25    25        Phosphoserine; by CDC2 and MAPK. 
MOD_RES   28    28        Phosphoserine. 
MOD_RES   38    38        Phosphoserine; by CDC2. 
MOD_RES   46    46        Phosphoserine (By similarity). 
MOD_RES   63    63        Phosphoserine; by PKA. 
MOD_RES   146   146        Phosphothreonine. 
Sequence information
Length: 149 AA [This is the length of the unprocessed precursor] Molecular weight: 17303 Da [This is the MW of the unprocessed precursor] CRC64: 316426F60DABCD01 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MASSDIQVKE LEKRASGQAF ELILSPRSKE SVPEFPLSPP KKKDLSLEEI QKKLEAAEER 

        70         80         90        100        110        120 
RKSHEAEVLK QLAEKREHEK EVLQKAIEEN NNFSKMAEEK LTHKMEANKE NREAQMAAKL 

       130        140 
ERLREKDKHI EEVRKNKESK DPADETEAD 

P16949 in FASTA format

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