NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1007/BF00018565; PubMed=2101693 [NCBI, ExPASy, EBI, Israel, Japan]
Melchers L.S., Maroney M.J., den Dulk-Ras A., Thompson D.V., van Vuuren H.A.J., Schilperoort R.A., Hooykaas P.J.J.;
"Octopine and nopaline strains of Agrobacterium tumefaciens differ in virulence; molecular characterization of the virF locus.";
Plant Mol. Biol. 14:249-259(1990).

Comments

FUNCTION: VirF protein is required for the formation of tumors of a wild-type size on certain plant species only.
INTERACTION:
Q9C5T5:ASK10 (xeno); NbExp=4; IntAct=EBI-605118, EBI-607786;
Q9MA75:At1g43700 (xeno); NbExp=2; IntAct=EBI-605118, EBI-606057;
Q39255:SKP1A (xeno); NbExp=5; IntAct=EBI-605118, EBI-532357;
Q9FHW7:SKP1B (xeno); NbExp=4; IntAct=EBI-605118, EBI-604076;

Copyright

Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.

Cross-references

Sequence databases

EMBL

X13981; CAA32163.1; -; Genomic_DNA.

[EMBL / GenBank / DDBJ] [CoDingSequence]

PIR

S15915; S07979.

3D structure databases

ModBase

P15597.

Protein-protein interaction databases

IntAct

P15597; -.

Ontologies

GO:0005515;	Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.

Family and domain databases

InterPro

IPR001810; F-box.
Graphical view of domain structure.

Pfam

PF00646; F-box; 1.
Pfam graphical view of domain structure.

Other

View cluster of proteins with at least 50% / 90% / 100% identity.

Keywords

Crown gall tumor; Plasmid; Virulence.

Features

Feature table viewer

`Key`	`From To`	`Length`		`Description`	`FTId`
`CHAIN`	`1 202`	`202`		`Protein virF.`	`PRO_0000065870`

Sequence information

Length: 202 AA [This is the length of the unprocessed precursor]

Molecular weight: 22437 Da [This is the MW of the unprocessed precursor]

CRC64: 3B0E33E157C1ADD1 [This is a checksum on the sequence]

        10         20         30         40         50         60 
MRNSSLRDAS GSNDAQVPHK TELLNLPDHV LTEVAKRLAT NNPVESAENI ANFSKSHRFT 

        70         80         90        100        110        120 
RDAVRTEPLE KFSSRLKILS RNAKLLSHAV RHAATLPDGE QLSEAQLSQM RSEVATRPVL 

       130        140        150        160        170        180 
GVAYTHQDGQ PEERLSGNHL DHKINNIPNL VFNVAEPIMF NEISALEVMA EVRPIARSIK 

       190        200 
TAHDDARAEL MSADRPRSTR GL

P15597 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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	BLAST submission on ExPASy/SIB or at NCBI (USA)		Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
	ScanProsite, MotifScan		Submit a homology modeling request to SWISS-MODEL
	NPSA Sequence analysis tools