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UniProtKB/Swiss-Prot entry P14270


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PDE4D_RAT
Primary accession number P14270
Secondary accession numbers O35470 Q6TRI0 Q8CG04 Q8CG06
Integrated into Swiss-Prot on January 1, 1990
Sequence was last modified on January 4, 2005 (Sequence version 4)
Annotations were last modified on    November 25, 2008 (Entry version 85)
Name and origin of the protein
Protein name cAMP-specific 3',5'-cyclic phosphodiesterase 4D
Synonyms EC 3.1.4.17
DPDE3
Gene name
Name: Pde4d
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), AND INDUCTION.
TISSUE=Testis;
PubMed=2554303 [NCBI, ExPASy, EBI, Israel, Japan]
Swinnen J.V., Joseph D.R., Conti M.;
"The mRNA encoding a high-affinity cAMP phosphodiesterase is regulated by hormones and cAMP.";
Proc. Natl. Acad. Sci. U.S.A. 86:8197-8201(1989).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 2 AND 3).
PubMed=8034568 [NCBI, ExPASy, EBI, Israel, Japan]
Sette C., Vicini E., Conti M.;
"The ratPDE3/IVd phosphodiesterase gene codes for multiple proteins differentially activated by cAMP-dependent protein kinase.";
J. Biol. Chem. 269:18271-18274(1994).
[3]
SEQUENCE REVISION TO 6.
Conti M.;
Submitted (OCT-1997) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [MRNA] OF 226-803 (ISOFORM 1), AND NUCLEOTIDE SEQUENCE [MRNA] OF 253-803 (ISOFORM 2).
DOI=10.1016/0378-1119(94)90155-4; PubMed=7958996 [NCBI, ExPASy, EBI, Israel, Japan]
Bolger G.B., Rodgers L., Riggs M.;
"Differential CNS expression of alternative mRNA isoforms of the mammalian genes encoding cAMP-specific phosphodiesterases.";
Gene 149:237-244(1994).
[5]
NUCLEOTIDE SEQUENCE (ISOFORMS 2 AND 3).
STRAIN=Wistar;
PubMed=8276818 [NCBI, ExPASy, EBI, Israel, Japan]
Monaco L., Vicini E., Conti M.;
"Structure of two rat genes coding for closely related rolipram-sensitive cAMP phosphodiesterases. Multiple mRNA variants originate from alternative splicing and multiple start sites.";
J. Biol. Chem. 269:347-357(1994).
[6]
ERRATUM.
Monaco L., Vicini E., Conti M.;
J. Biol. Chem. 269:20806-20806(1994).
[7]
NUCLEOTIDE SEQUENCE (ISOFORM 5).
STRAIN=Sprague-Dawley;
TISSUE=Brain;
Jin S.-L.C., Kuo W.-P., Conti M.;
"Characterization of a cAMP-specific phosphodiesterase variant (PDE4D4) expressed in the rat brain.";
Submitted (OCT-1997) to the EMBL/GenBank/DDBJ databases.
[8]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 4 AND 7).
STRAIN=Sprague-Dawley;
DOI=10.1016/S0898-6568(03)00042-1; PubMed=12834813 [NCBI, ExPASy, EBI, Israel, Japan]
Wang D., Deng C., Bugaj-Gaweda B., Kwan M., Gunwaldsen C., Leonard C., Xin X., Hu Y., Unterbeck A., De Vivo M.;
"Cloning and characterization of novel PDE4D isoforms PDE4D6 and PDE4D7.";
Cell. Signal. 15:883-891(2003).
[9]
NUCLEOTIDE SEQUENCE (ISOFORM 6).
Gaweda B., De Vivo M., Wang D.;
"Novel PDE4D isoform, PDE4D9.";
Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases.
[10]
NUCLEOTIDE SEQUENCE OF 224-672.
TISSUE=Testis;
PubMed=2546153 [NCBI, ExPASy, EBI, Israel, Japan]
Swinnen J.V., Joseph D.R., Conti M.;
"Molecular cloning of rat homologues of the Drosophila melanogaster dunce cAMP phosphodiesterase: evidence for a family of genes.";
Proc. Natl. Acad. Sci. U.S.A. 86:5325-5329(1989).
[11]
PHOSPHORYLATION, AND SUBCELLULAR LOCATION.
DOI=10.1074/jbc.274.15.10557; PubMed=10187850 [NCBI, ExPASy, EBI, Israel, Japan]
Liu H., Maurice D.H.;
"Phosphorylation-mediated activation and translocation of the cyclic AMP-specific phosphodiesterase PDE4D3 by cyclic AMP-dependent protein kinase and mitogen-activated protein kinases. A potential mechanism allowing for the coordinated regulation of PDE4D activity and targeting.";
J. Biol. Chem. 274:10557-10565(1999).
[12]
INTERACTION WITH PDE4DIP.
DOI=10.1074/jbc.M006546200; PubMed=11134006 [NCBI, ExPASy, EBI, Israel, Japan]
Verde I., Pahlke G., Salanova M., Zhang G., Wang S., Coletti D., Onuffer J., Jin S.-L.C., Conti M.;
"Myomegalin is a novel protein of the Golgi/centrosome that interacts with a cyclic nucleotide phosphodiesterase.";
J. Biol. Chem. 276:11189-11198(2001).
[13]
SUBCELLULAR LOCATION, AND INTERACTION WITH THE CENTROSOME (ISOFORM 1).
DOI=10.1074/jbc.C000911200; PubMed=11285255 [NCBI, ExPASy, EBI, Israel, Japan]
Tasken K.A., Collas P., Kemmner W.A., Witczak O., Conti M., Tasken K.;
"Phosphodiesterase 4D and protein kinase a type II constitute a signaling unit in the centrosomal area.";
J. Biol. Chem. 276:21999-22002(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U09457; AAB81869.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U09456; AAA20393.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L27059; AAA56857.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L27060; AAC26969.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01280; AAA18925.1; -; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01278; AAA18925.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01282; AAA18925.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01283; AAA18925.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01284; AAA18925.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01285; AAA18925.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01286; AAA18925.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01287; AAA18925.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01279; AAA18925.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01280; AAA18924.1; -; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01278; AAA18924.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01282; AAA18924.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01283; AAA18924.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01284; AAA18924.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01285; AAA18924.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01286; AAA18924.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01287; AAA18924.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01279; AAA18924.1; JOINED; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U09455; AAA20401.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF031373; AAB95266.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF536979; AAN10121.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY388961; AAQ90405.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF536974; AAN10116.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR B53109; B53109.
I61259; I61259.
RefSeq NP_001106799.1; -.
NP_001106800.1; -.
NP_058728.1; -.
UniGene Rn.163460
3D structure databases
HSSP Q08499; 1OYN. [HSSP ENTRY / PDB]
SMR P14270; 383-708.
ModBase P14270.
PTM databases
PhosphoSite P14270; -.
Organism-specific databases
RGD 3281; Pde4d.
Ontologies
GO
GO:0005813; Cellular component: centrosome (inferred from electronic annotation from UniProtKB-SubCell).
GO:0016020; Cellular component: membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0004114; Molecular function: 3',5'-cyclic-nucleotide phosphodiesterase activity (inferred from electronic annotation from InterPro).
GO:0046872; Molecular function: metal ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0007165; Biological process: signal transduction (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR003607; Met-dep_phosphohydro_HD.
IPR002073; PDEase.
Graphical view of domain structure.
Pfam PF00233; PDEase_I; 1.
Pfam graphical view of domain structure.
PRINTS PR00387; PDIESTERASE1.
SMART SM00471; HDc; 1.
SMART graphical view of domain structure.
PROSITE PS00126; PDEASE_I; 1.
ProtoNet P14270.
Genome annotation databases
GeneID 24627; -.
KEGG rno:24627; -.
Phylogenomic databases
HOVERGEN P14270; -.
Other
NextBio 603898; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; cAMP; Cytoplasm; Cytoskeleton; Hydrolase; Membrane; Metal-binding; Phosphoprotein.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   803  803     cAMP-specific 3',5'-cyclic phosphodiesterase 4D. PRO_0000198816
METAL   461   461        Divalent metal cation 1 (By similarity). 
METAL   497   497        Divalent metal cation 1 (By similarity). 
METAL   498   498        Divalent metal cation 1 (By similarity). 
METAL   498   498        Divalent metal cation 2 (By similarity). 
METAL   615   615        Divalent metal cation 1 (By similarity). 
BINDING   457   457        cAMP (By similarity). 
BINDING   615   615        cAMP (By similarity). 
BINDING   618   618        cAMP (By similarity). 
BINDING   666   666        cAMP (By similarity). 
MOD_RES   18    18        Phosphoserine (By similarity). 
MOD_RES   20    20        Phosphoserine (By similarity). 
MOD_RES   192   192        Phosphoserine (By similarity). 
MOD_RES   197   197        Phosphoserine (By similarity). 
VAR_SEQ   1   297        Missing (in isoform 3). VSP_004582
VAR_SEQ   1   286        Missing (in isoform 7). VSP_012404
VAR_SEQ   1   264        MEAEGSSVPARAGSHEGSDSSGGAALKAPKHLWRHEQHHQ YPLRQPQFRLLHPHHHLPPPPPPSPQPQLQPPPPPPLPPP PPPPGATRGRYASSGASRVRHRGYSDTERYLYCRAMDRTS YAVETGHRPGLKKSRMSWPSSFQGLRRFDVDNGTSAGRSP LDPMTSPGSGLILQANFVHSQRRESFLYRSDSDYDLSPKS MSRNSSIASDIHGDDLIVTPFAQVLASLRTVRNNFAALTN LQDRAPSKRSPMCNQPSINKATIT -> MKEQPSCAGTGHPSMAGYGRMAPFELAGGPVKRLRTESPF PCLFA (in isoform 2). VSP_004581
VAR_SEQ   1   131        Missing (in isoform 1). VSP_012398
VAR_SEQ   1   125        Missing (in isoform 6). VSP_012402
VAR_SEQ   1    56        Missing (in isoform 4). VSP_012400
VAR_SEQ   57   147        LPPPPPPSPQPQLQPPPPPPLPPPPPPPGATRGRYASSGA SRVRHRGYSDTERYLYCRAMDRTSYAVETGHRPGLKKSRM SWPSSFQGLRR -> MERNTCDVLSRSKSASEETLHSCNDEEDPFRGMEPYLVRR LSSRSIQLPPLAFRQLEQTDLRSESENIPRPTSLPLKILP LIAVTSADSTG (in isoform 4). VSP_012401
VAR_SEQ   126   147        GHRPGLKKSRMSWPSSFQGLRR -> MSIIMKPRSRSTSSLRTTEAVC (in isoform 6). VSP_012403
VAR_SEQ   132   147        KKSRMSWPSSFQGLRR -> MMHVNTFPFRRHSWIC (in isoform 1). VSP_012399
VAR_SEQ   287   301        ETLQTRHSVSEMASN -> MPEANYLLSVSWGYI (in isoform 7). VSP_012405
CONFLICT   226   226        A -> N (in Ref. 4; AAA56857). 
CONFLICT   357   357        S -> P (in Ref. 9; AAQ90405). 
CONFLICT   480   486        Missing (in Ref. 5). 
CONFLICT   641   641        G -> E (in Ref. 4; AAC26969). 
CONFLICT   757   757        C -> Y (in Ref. 4; AAA56857). 
Sequence information
Length: 803 AA [This is the length of the unprocessed precursor] Molecular weight: 90552 Da [This is the MW of the unprocessed precursor] CRC64: 13E28B257556496D [This is a checksum on the sequence]
        10         20         30         40         50         60 
MEAEGSSVPA RAGSHEGSDS SGGAALKAPK HLWRHEQHHQ YPLRQPQFRL LHPHHHLPPP 

        70         80         90        100        110        120 
PPPSPQPQLQ PPPPPPLPPP PPPPGATRGR YASSGASRVR HRGYSDTERY LYCRAMDRTS 

       130        140        150        160        170        180 
YAVETGHRPG LKKSRMSWPS SFQGLRRFDV DNGTSAGRSP LDPMTSPGSG LILQANFVHS 

       190        200        210        220        230        240 
QRRESFLYRS DSDYDLSPKS MSRNSSIASD IHGDDLIVTP FAQVLASLRT VRNNFAALTN 

       250        260        270        280        290        300 
LQDRAPSKRS PMCNQPSINK ATITEEAYQK LASETLEELD WCLDQLETLQ TRHSVSEMAS 

       310        320        330        340        350        360 
NKFKRMLNRE LTHLSEMSRS GNQVSEYISN TFLDKQHEVE IPSPTQKEKE KKKRPMSQIS 

       370        380        390        400        410        420 
GVKKLMHSSS LTNSCIPRFG VKTEQEDVLA KELEDVNKWG LHVFRIAELS GNRPLTVIMH 

       430        440        450        460        470        480 
TIFQERDLLK TFKIPVDTLI TYLMTLEDHY HADVAYHNNI HAADVVQSTH VLLSTPALEA 

       490        500        510        520        530        540 
VFTDLEILAA IFASAIHDVD HPGVSNQFLI NTNSELALMY NDSSVLENHH LAVGFKLLQE 

       550        560        570        580        590        600 
ENCDIFQNLT KKQRQSLRKM AIDIVLATDM SKHMNLLADL KTMVETKKVT SSGVLLLDNY 

       610        620        630        640        650        660 
SDRIQVLQNM VHCADLSNPT KPLQLYRQWT DRIMEEFFRQ GDRERERGME ISPMCDKHNA 

       670        680        690        700        710        720 
SVEKSQVGFI DYIVHPLWET WADLVHPDAQ DILDTLEDNR EWYQSTIPQS PSPAPDDQED 

       730        740        750        760        770        780 
GRQGQTEKFQ FELTLEEDGE SDTEKDSGSQ VEEDTSCSDS KTLCTQDSES TEIPLDEQVE 

       790        800 
EEAVAEEESQ PQTGVADDCC PDT 

P14270 in FASTA format

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