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UniProtKB/Swiss-Prot entry P13633


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DCTB_RHIME
Primary accession number P13633
Secondary accession numbers None
Integrated into Swiss-Prot on January 1, 1990
Sequence was last modified on November 2, 2001 (Sequence version 3)
Annotations were last modified on    November 25, 2008 (Entry version 89)
Name and origin of the protein
Protein name C4-dicarboxylate transport sensor protein dctB
Synonym EC 2.7.13.3
Gene name
Name: dctB
OrderedLocusNames: RB1524
ORFNames: SMb20612
From
Rhizobium meliloti (Sinorhizobium meliloti) [TaxID: 382] [HAMAP proteome]
Encoded on Plasmid pSymB (megaplasmid 2).
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=JJ1c10;
PubMed=2134335 [NCBI, ExPASy, EBI, Israel, Japan]
Watson R.J.;
"Analysis of the C4-dicarboxylate transport genes of Rhizobium meliloti: nucleotide sequence and deduced products of dctA, dctB, and dctD.";
Mol. Plant Microbe Interact. 3:174-181(1990).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=1021;
PubMed=2793824 [NCBI, ExPASy, EBI, Israel, Japan]
Jiang J., Gu B., Albright L.M., Nixon B.T.;
"Conservation between coding and regulatory elements of Rhizobium meliloti and Rhizobium leguminosarum dct genes.";
J. Bacteriol. 171:5244-5253(1989).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=1021;
DOI=10.1073/pnas.161294698; PubMed=11481431 [NCBI, ExPASy, EBI, Israel, Japan]
Finan T.M., Weidner S., Wong K., Buhrmester J., Chain P., Vorhoelter F.J., Hernandez-Lucas I., Becker A., Cowie A., Gouzy J., Golding B., Puehler A.;
"The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing endosymbiont Sinorhizobium meliloti.";
Proc. Natl. Acad. Sci. U.S.A. 98:9889-9894(2001).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-185.
STRAIN=RCR2011 / SU47;
PubMed=2551890 [NCBI, ExPASy, EBI, Israel, Japan]
Engelke T., Jording D., Kapp D., Puehler A.;
"Identification and sequence analysis of the Rhizobium meliloti dctA gene encoding the C4-dicarboxylate carrier.";
J. Bacteriol. 171:5551-5560(1989).
[5]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-177.
DOI=10.1016/0378-1119(89)90473-3; PubMed=2695394 [NCBI, ExPASy, EBI, Israel, Japan]
Wang Y.-P., Birkenhead K., Boesten B., Manian S., O'Gara F.;
"Genetic analysis and regulation of the Rhizobium meliloti genes controlling C4-dicarboxylic acid transport.";
Gene 85:135-144(1989).
Comments
  • FUNCTION: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates dctD in response to environmental signals.
  • CATALYTIC ACTIVITY: ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.
  • SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
  • SIMILARITY: Contains 1 histidine kinase domain.
  • SEQUENCE CAUTION:
    • Sequence=M33555; Type=Frameshift; Positions=20, 161;
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
J03683; AAA63511.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J03683; AAA63510.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J03683; AAA63512.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M26531; AAA26249.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL591985; CAC49924.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M26399; AAA26251.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M33555; -; NOT_ANNOTATED_CDS; Genomic_DNA.[EMBL / GenBank / DDBJ]
PIR B33586; B33586.
D96032; D96032.
RefSeq NP_438064.1; -.
3D structure databases
HSSP P02933; 1BXD. [HSSP ENTRY / PDB]
ModBase P13633.
Enzyme and pathway databases
BioCyc SMEL266834:SMB20612-MON; -.
Ontologies
GO
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from InterPro).
GO:0000155; Molecular function: two-component sensor activity (inferred from electronic annotation from InterPro).
GO:0018106; Biological process: peptidyl-histidine phosphorylation (inferred from electronic annotation from InterPro).
GO:0000160; Biological process: two-component signal transduction system (phosphorelay) (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR003594; ATP_bd_ATPase.
IPR004358; Sig_transdc_His_kin-like_C.
IPR003661; Sig_transdc_His_kin_sub1_dim/P.
IPR005467; Sig_transdc_His_kinase_core.
IPR017055; Sig_transdc_His_kinase_DctB.
Graphical view of domain structure.
Gene3D G3DSA:3.30.565.10; ATP_bd_ATPase; 1.
Pfam PF02518; HATPase_c; 1.
PF00512; HisKA; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF036431; STHK_DctB; 1.
PRINTS PR00344; BCTRLSENSOR.
SMART SM00387; HATPase_c; 1.
SM00388; HisKA; 1.
SMART graphical view of domain structure.
PROSITE PS50109; HIS_KIN; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet P13633.
Genome annotation databases
GeneID 1237856; -.
GenomeReviews AL591985_GR; RB1524.
KEGG sme:SMb20612; -.
NMPDR fig|266834.1.peg.6159; -.
Phylogenomic databases
HOGENOM P13633; -.
Genome annotation databases
CMR P13633; RB1524.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cell inner membrane; Cell membrane; Complete proteome; Kinase; Membrane; Phosphoprotein; Plasmid; Transferase; Transmembrane; Two-component regulatory system.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   621  621     C4-dicarboxylate transport sensor protein dctB. PRO_0000074748
TOPO_DOM   1    26  26     Cytoplasmic (Potential). 
TRANSMEM   27    45  19     Potential. 
TOPO_DOM   46   320  275     Periplasmic. 
TRANSMEM   321   338  18     Potential. 
TOPO_DOM   339   621  283     Cytoplasmic (Potential). 
DOMAIN   412   621  210     Histidine kinase. 
MOD_RES   415   415        Phosphohistidine; by autocatalysis (By similarity). 
CONFLICT   3     3        H -> N (in Ref. 1 and 5). 
CONFLICT   102   102        P -> Q (in Ref. 1; AAA63511/AAA63510). 
CONFLICT   174   174        N -> K (in Ref. 5). 
CONFLICT   504   504        L -> I (in Ref. 1; AAA63511/AAA63510). 
CONFLICT   540   540        D -> N (in Ref. 1; AAA63511/AAA63510). 
CONFLICT   548   551        EEAA -> KAAP (in Ref. 1; AAA63511/AAA63510). 
CONFLICT   615   615        A -> T (in Ref. 1; AAA63511/AAA63510). 
Sequence information
Length: 621 AA [This is the length of the unprocessed precursor] Molecular weight: 67133 Da [This is the MW of the unprocessed precursor] CRC64: D60F724E2CA6BCC7 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MHHVRMVKLP AEASDPHALR SRARRSWLVF AAVALVLLAA GLLLARDYGR SQALAGLAGQ 

        70         80         90        100        110        120 
SRIDASLKAS LLRAVVERQR ALPLVLADDA AIRGALLSPD RPSLDRINRK LEALATSAEA 

       130        140        150        160        170        180 
AVIYLIDRSG VAVAASNWQE PTSFVGNDYA FRDYFRLAVR DGMAEHFAMG TVSNRPGLYI 

       190        200        210        220        230        240 
SRRVDGPGGP LGVIVAKLEF DGVEADWQAS GKPAYVTDRR GIVLITSLPS WRFMTTKPIA 

       250        260        270        280        290        300 
EDRLAPIRES LQFGDAPLLP LPFRKIEARP DGSSTLDALL PGDSTAAFLR VETMVPSTNW 

       310        320        330        340        350        360 
RLEQLSPLKA PLAAGAREAQ LLTLAALVPL LALAALLLRR RQVVAMRSAE ERLARNALEA 

       370        380        390        400        410        420 
SVEERTRDLR MARDRLETEI ADHRQTTEKL QAVQQDLVQA NRLAILGQVA AGVAHEINQP 

       430        440        450        460        470        480 
VATIRAYADN ARTFLHRGQT VTAAENMESI AELTERVGAI TDELRRFARK GHFAAGPTAM 

       490        500        510        520        530        540 
KEVVEGALML LRSRFAGRMD AIRLDLPPDG LQALGNRIRL EQVLINLLQN ALEAIGDSED 

       550        560        570        580        590        600 
GAIQVRCEEA AGGIALTVAD NGPGIAADVR EELFTPFNTS KEDGLGLGLA ISKEIVSDYG 

       610        620 
GTIEVESGPS GTTFAVNLKK A 

P13633 in FASTA format

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