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UniProtKB/Swiss-Prot entry P12969


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name IAPP_RAT
Primary accession number P12969
Secondary accession numbers None
Integrated into Swiss-Prot on October 1, 1989
Sequence was last modified on October 1, 1989 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 69)
Name and origin of the protein
Protein name Islet amyloid polypeptide [Precursor]
Synonyms Amylin
Diabetes-associated peptide
DAP
Gene name
Name: Iapp
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1073/pnas.86.15.5738; PubMed=2668946 [NCBI, ExPASy, EBI, Israel, Japan]
Nishi M., Chan S.J., Nagamatsu S., Bell G.I., Steiner D.F.;
"Conservation of the sequence of islet amyloid polypeptide in five mammals is consistent with its putative role as an islet hormone.";
Proc. Natl. Acad. Sci. U.S.A. 86:5738-5742(1989).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1073/pnas.86.9.3127; PubMed=2654937 [NCBI, ExPASy, EBI, Israel, Japan]
Leffert J.D., Newgard C.B., Okamoto H., Milburn J.L., Luskey K.L.;
"Rat amylin: cloning and tissue-specific expression in pancreatic islets.";
Proc. Natl. Acad. Sci. U.S.A. 86:3127-3130(1989).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=WAP;
TISSUE=Liver;
DOI=10.1016/0167-4781(90)90210-S; PubMed=2223885 [NCBI, ExPASy, EBI, Israel, Japan]
van Mansfeld A.D.M., Mosselman S., Hoeppener J.W.M., Zandberg J., van Teeffelen H.A.A.M., Baas P.D., Lips C.J.M., Jansz H.S.;
"Islet amyloid polypeptide: structure and upstream sequences of the IAPP gene in rat and man.";
Biochim. Biophys. Acta 1087:235-240(1990).
[4]
PROTEIN SEQUENCE OF 38-74.
DOI=10.1016/0006-291X(89)91733-6; PubMed=2679555 [NCBI, ExPASy, EBI, Israel, Japan]
Asai J., Nakazato M., Kangawa K., Matsukura S., Matsuo H.;
"Isolation and sequence determination of rat islet amyloid polypeptide.";
Biochem. Biophys. Res. Commun. 164:400-405(1989).
[5]
PROTEIN SEQUENCE OF 38-74.
DOI=10.1016/0006-291X(90)90400-H; PubMed=2357234 [NCBI, ExPASy, EBI, Israel, Japan]
Asai J., Nakazato M., Miyazato M., Kangawa K., Matsuo H., Matsukura S.;
"Regional distribution and molecular forms of rat islet amyloid polypeptide.";
Biochem. Biophys. Res. Commun. 169:788-795(1990).
[6]
NUCLEOTIDE SEQUENCE [MRNA] OF 38-74.
DOI=10.1016/0014-5793(89)81467-X; PubMed=2666169 [NCBI, ExPASy, EBI, Israel, Japan]
Betsholtz C., Christmansson L., Engstroem U., Rorsman F., Svensson V., Johnson K.H., Westermark P.;
"Sequence divergence in a specific region of islet amyloid polypeptide (IAPP) explains differences in islet amyloid formation between species.";
FEBS Lett. 251:261-264(1989).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M25390; AAA41359.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J04544; AAA40730.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X52820; CAA37003.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X52821; CAA37003.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00202679; -.
PIR S13566; TCRTIA.
RefSeq NP_036718.1; -.
UniGene Rn.11394
3D structure databases
ModBase P12969.
Organism-specific databases
RGD 2854; Iapp.
Gene expression databases
ArrayExpress P12969; -.
GermOnline ENSRNOG00000012417; Rattus norvegicus.
Ontologies
GO
GO:0005576; Cellular component: extracellular region (inferred from electronic annotation from UniProtKB-SubCell).
GO:0030141; Cellular component: secretory granule (traceable author statement from RGD).
GO:0005179; Molecular function: hormone activity (inferred from electronic annotation from UniProtKB-KW).
GO:0006006; Biological process: glucose metabolic process (traceable author statement from RGD).
QuickGo view.
Family and domain databases
InterPro IPR001693; Calcitonin-like.
IPR018360; Calcitonin_CS.
IPR000443; Islet_amyloid_polypep.
Graphical view of domain structure.
PANTHER PTHR10505; Calcitonin-like; 1.
Pfam PF00214; Calc_CGRP_IAPP; 1.
Pfam graphical view of domain structure.
PRINTS PR00818; ISLETAMYLOID.
SMART SM00113; CALCITONIN; 1.
SMART graphical view of domain structure.
PROSITE PS00258; CALCITONIN; 1.
Genome annotation databases
Ensembl ENSRNOG00000012417; Rattus norvegicus. [Contig view]
GeneID 24476; -.
KEGG rno:24476; -.
Phylogenomic databases
HOVERGEN P12969; -.
OMA P12969; NTYGKRN.
Other
NextBio 603429; -.
ProtoNet P12969.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Amidation; Amyloid; Cleavage on pair of basic residues; Direct protein sequencing; Disulfide bond; Hormone; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom  To Length Description FTId
SIGNAL   1   23  23     Potential. 
PROPEP   24   35  12      PRO_0000004121
PEPTIDE   38   74  37     Islet amyloid polypeptide. PRO_0000004122
PROPEP   78   93  16      PRO_0000004123
MOD_RES   74   74        Tyrosine amide. 
DISULFID   39   44        By similarity. 
Sequence information
Length: 93 AA [This is the length of the unprocessed precursor] Molecular weight: 10015 Da [This is the MW of the unprocessed precursor] CRC64: 5A76C92E624DA962 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRCISRLPAV LLILSVALGH LRATPVGSGT NPQVDKRKCN TATCATQRLA NFLVRSSNNL 

        70         80         90 
GPVLPPTNVG SNTYGKRNVA EDPNRESLDF LLL 

P12969 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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