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UniProtKB/Swiss-Prot entry P08518


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name RPB2_YEAST
Primary accession number P08518
Secondary accession numbers Q12738 Q7Z9Y0
Integrated into Swiss-Prot on August 1, 1988
Sequence was last modified on November 1, 1997 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 100)
Name and origin of the protein
Protein name DNA-directed RNA polymerase II subunit RPB2
Synonyms RNA polymerase II subunit 2
EC 2.7.7.6
DNA-directed RNA polymerase II 140 kDa polypeptide
B150
Gene name
Name: RPB2
Synonyms: RPB150, RPO22
OrderedLocusNames: YOR151C
From
Saccharomyces cerevisiae (Baker's yeast) [TaxID: 4932] 
Taxonomy Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=3547406 [NCBI, ExPASy, EBI, Israel, Japan]
Sweetser D., Nonet M., Young R.A.;
"Prokaryotic and eukaryotic RNA polymerases have homologous core subunits.";
Proc. Natl. Acad. Sci. U.S.A. 84:1192-1196(1987).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=S288c / FY1678;
DOI=10.1002/(SICI)1097-0061(199701)13:1<73::AID-YEA52>3.3.CO;2-D; PubMed=9046089 [NCBI, ExPASy, EBI, Israel, Japan]
Bordonne R., Camasses A., Madania A., Poch O., Tarassov I.A., Winsor B., Martin R.P.;
"Analysis of a 35.6 kb region on the right arm of Saccharomyces cerevisiae chromosome XV.";
Yeast 13:73-83(1997).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=S288c / FY1678;
PubMed=9169874 [NCBI, ExPASy, EBI, Israel, Japan]
Dujon B., Albermann K., Aldea M., Alexandraki D., Ansorge W., Arino J., Benes V., Bohn C., Bolotin-Fukuhara M., Bordonne R., Boyer J., Camasses A., Casamayor A., Casas C., Cheret G., Cziepluch C., Daignan-Fornier B., Dang V.-D., de Haan M., Delius H., Durand P., Fairhead C., Feldmann H., Gaillon L., Galisson F., Gamo F.-J., Gancedo C., Goffeau A., Goulding S.E., Grivell L.A., Habbig B., Hand N.J., Hani J., Hattenhorst U., Hebling U., Hernando Y., Herrero E., Heumann K., Hiesel R., Hilger F., Hofmann B., Hollenberg C.P., Hughes B., Jauniaux J.-C., Kalogeropoulos A., Katsoulou C., Kordes E., Lafuente M.J., Landt O., Louis E.J., Maarse A.C., Madania A., Mannhaupt G., Marck C., Martin R.P., Mewes H.-W., Michaux G., Paces V., Parle-McDermott A.G., Pearson B.M., Perrin A., Pettersson B., Poch O., Pohl T.M., Poirey R., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rechmann S., Schwager C., Schweizer M., Sor F., Sterky F., Tarassov I.A., Teodoru C., Tettelin H., Thierry A., Tobiasch E., Tzermia M., Uhlen M., Unseld M., Valens M., Vandenbol M., Vetter I., Vlcek C., Voet M., Volckaert G., Voss H., Wambutt R., Wedler H., Wiemann S., Winsor B., Wolfe K.H., Zollner A., Zumstein E., Kleine K.;
"The nucleotide sequence of Saccharomyces cerevisiae chromosome XV.";
Nature 387:98-102(1997).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 549-773.
STRAIN=ATCC 18824 / CBS 1171 / DSM 70449 / IFO 10217 / NRRL Y-12632;
DOI=10.1016/S1567-1356(03)00012-6; PubMed=12748053 [NCBI, ExPASy, EBI, Israel, Japan]
Kurtzman C.P., Robnett C.J.;
"Phylogenetic relationships among yeasts of the 'Saccharomyces complex' determined from multigene sequence analyses.";
FEMS Yeast Res. 3:417-432(2003).
[5]
PROTEIN SEQUENCE OF 837-844.
PubMed=2204624 [NCBI, ExPASy, EBI, Israel, Japan]
Riva M., Carles C., Sentenac A., Grachev M.A., Mustaev A.A., Zaychikov E.F.;
"Mapping the active site of yeast RNA polymerase B (II).";
J. Biol. Chem. 265:16498-16503(1990).
[6]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-915; THR-916 AND SER-919, AND MASS SPECTROMETRY.
DOI=10.1074/mcp.M700468-MCP200; PubMed=18407956 [NCBI, ExPASy, EBI, Israel, Japan]
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.;
"A multidimensional chromatography technology for in-depth phosphoproteome analysis.";
Mol. Cell. Proteomics 7:1389-1396(2008).
[7]
ELECTRON MICROSCOPY OF THE RNA POL II/TFIIF COMPLEX.
DOI=10.1016/S1097-2765(03)00387-3; PubMed=14580350 [NCBI, ExPASy, EBI, Israel, Japan]
Chung W.H., Craighead J.L., Chang W.H., Ezeokonkwo C., Bareket-Samish A., Kornberg R.D., Asturias F.J.;
"RNA polymerase II/TFIIF structure and conserved organization of the initiation complex.";
Mol. Cell 12:1003-1013(2003).
[8]
LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
DOI=10.1038/nature02046; PubMed=14562106 [NCBI, ExPASy, EBI, Israel, Japan]
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.;
"Global analysis of protein expression in yeast.";
Nature 425:737-741(2003).
[9]
INTERACTION WITH RTT103.
DOI=10.1038/nature03041; PubMed=15565157 [NCBI, ExPASy, EBI, Israel, Japan]
Kim M., Krogan N.J., Vasiljeva L., Rando O.J., Nedea E., Greenblatt J.F., Buratowski S.;
"The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.";
Nature 432:517-522(2004).
[10]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-919, AND MASS SPECTROMETRY.
DOI=10.1021/pr060559j; PubMed=17330950 [NCBI, ExPASy, EBI, Israel, Japan]
Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J., Elias J.E., Gygi S.P.;
"Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.";
J. Proteome Res. 6:1190-1197(2007).
[11]
X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS) OF THE RNA POL II CORE COMPLEX.
DOI=10.1126/science.1059493; PubMed=11313498 [NCBI, ExPASy, EBI, Israel, Japan]
Cramer P., Bushnell D.A., Kornberg R.D.;
"Structural basis of transcription: RNA polymerase II at 2.8 Angstrom resolution.";
Science 292:1863-1876(2001).
[12]
X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE RNA POL II CORE COMPLEX.
DOI=10.1126/science.1059495; PubMed=11313499 [NCBI, ExPASy, EBI, Israel, Japan]
Gnatt A.L., Cramer P., Fu J., Bushnell D.A., Kornberg R.D.;
"Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution.";
Science 292:1876-1882(2001).
[13]
X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS) OF THE RNA POL II CORE COMPLEX IN COMPLEX WITH ALPHA-AMANITIN.
DOI=10.1073/pnas.251664698; PubMed=11805306 [NCBI, ExPASy, EBI, Israel, Japan]
Bushnell D.A., Cramer P., Kornberg R.D.;
"Structural basis of transcription: alpha-amanitin-RNA polymerase II cocrystal at 2.8 A resolution.";
Proc. Natl. Acad. Sci. U.S.A. 99:1218-1222(2002).
[14]
X-RAY CRYSTALLOGRAPHY (3.8 ANGSTROMS) OF THE RNA POL II COMPLEX IN COMPLEX WITH DST1.
DOI=10.1016/S0092-8674(03)00598-1; PubMed=12914699 [NCBI, ExPASy, EBI, Israel, Japan]
Kettenberger H., Armache K.J., Cramer P.;
"Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage.";
Cell 114:347-357(2003).
[15]
X-RAY CRYSTALLOGRAPHY (4.2 ANGSTROMS) OF THE RNA POL II COMPLEX.
DOI=10.1073/pnas.1030608100; PubMed=12746495 [NCBI, ExPASy, EBI, Israel, Japan]
Armache K.J., Kettenberger H., Cramer P.;
"Architecture of initiation-competent 12-subunit RNA polymerase II.";
Proc. Natl. Acad. Sci. U.S.A. 100:6964-6968(2003).
[16]
X-RAY CRYSTALLOGRAPHY (4.1 ANGSTROMS) OF THE RNA POL II CORE COMPLEX.
DOI=10.1073/pnas.1130601100; PubMed=12746498 [NCBI, ExPASy, EBI, Israel, Japan]
Bushnell D.A., Kornberg R.D.;
"Complete, 12-subunit RNA polymerase II at 4.1-A resolution: implications for the initiation of transcription.";
Proc. Natl. Acad. Sci. U.S.A. 100:6969-6973(2003).
[17]
X-RAY CRYSTALLOGRAPHY (2.3 ANGSTROMS) OF THE RNA POL II CORE COMPLEX.
DOI=10.1016/j.cell.2004.10.016; PubMed=15537538 [NCBI, ExPASy, EBI, Israel, Japan]
Westover K.D., Bushnell D.A., Kornberg R.D.;
"Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center.";
Cell 119:481-489(2004).
[18]
X-RAY CRYSTALLOGRAPHY (4.5 ANGSTROMS).
DOI=10.1016/j.molcel.2004.11.040; PubMed=15610738 [NCBI, ExPASy, EBI, Israel, Japan]
Kettenberger H., Armache K.J., Cramer P.;
"Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS.";
Mol. Cell 16:955-965(2004).
[19]
X-RAY CRYSTALLOGRAPHY (4.5 ANGSTROMS) OF THE RNA POL II CORE COMPLEX.
DOI=10.1126/science.1090838; PubMed=14963322 [NCBI, ExPASy, EBI, Israel, Japan]
Bushnell D.A., Westover K.D., Davis R.E., Kornberg R.D.;
"Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms.";
Science 303:983-988(2004).
[20]
X-RAY CRYSTALLOGRAPHY (3.8 ANGSTROMS) OF THE RNA POL II COMPLEX.
DOI=10.1074/jbc.M413038200; PubMed=15591044 [NCBI, ExPASy, EBI, Israel, Japan]
Armache K.J., Mitterweger S., Meinhart A., Cramer P.;
"Structures of complete RNA polymerase II and its subcomplex, Rpb4/7.";
J. Biol. Chem. 280:7131-7134(2005).
[21]
X-RAY CRYSTALLOGRAPHY (3.8 ANGSTROMS) OF THE RNA POL II COMPLEX IN COMPLEX WITH INHIBITING NON-CODING RNA.
DOI=10.1038/nsmb1032; PubMed=16341226 [NCBI, ExPASy, EBI, Israel, Japan]
Kettenberger H., Eisenfuhr A., Brueckner F., Theis M., Famulok M., Cramer P.;
"Structure of an RNA polymerase II-RNA inhibitor complex elucidates transcription regulation by noncoding RNAs.";
Nat. Struct. Mol. Biol. 13:44-48(2006).
[22]
X-RAY CRYSTALLOGRAPHY (4.15 ANGSTROMS) OF THE RNA POL II COMPLEX.
DOI=10.1016/j.str.2006.04.003; PubMed=16765890 [NCBI, ExPASy, EBI, Israel, Japan]
Meyer P.A., Ye P., Zhang M., Suh M.H., Fu J.;
"Phasing RNA polymerase II using intrinsically bound Zn atoms: an updated structural model.";
Structure 14:973-982(2006).
Comments
  • FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerases II which synthesizes mRNA precursors and many functional non-coding RNAs. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. During a transcription cycle, Pol II, general transcription factors and the Mediator complex assemble as the preinitiation complex (PIC) at the promoter. 11-15 base pairs of DNA surrounding the transcription start site are melted and the single stranded DNA template strand of the promoter is positioned deeply within the central active site cleft of Pol II to form the open complex. After synthesis of about 30 bases of RNA, Pol II releases its contacts with the core promoter and the rest of the transcription machinery (promoter clearance) and enters the stage of transcription elongation in which it moves on the template as the transcript elongates. Pol II appears to oscillate between inactive and active conformations at each step of nucleotide addition. Pol II is composed of mobile elements that move relative to each other. The core element with the central large cleft comprises RPB3, RBP10, RPB11, RPB12 and regions of RPB1 and RPB2 forming the active center. The clamp element (portions of RPB1, RPB2 and RPB3) is connected to the core through a set of flexible switches and moves to open and close the cleft. The cleft is surrounded by jaws: an upper jaw formed by portions of RBP1, RPB2 and RPB9, and a lower jaw. The jaws are thought to grab the incoming DNA template. The fork loop 1 (RPB2) interacts with the RNA-DNA hybrid, possibly stabilizing it.
  • CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).
  • SUBUNIT: Component of the RNA polymerase II (Pol II) complex consisting of 12 subunits.
  • SUBCELLULAR LOCATION: Nucleus.
  • MISCELLANEOUS: The binding of ribonucleoside triphosphate to the RNA polymerase II transcribing complex probably involves a two-step mechanism. The initial binding seems to occur at the entry (E) site and involves a magnesium ion coordinated by three conserved aspartate residues of the two largest RNA Pol II subunits.
  • MISCELLANEOUS: Present with 18700 molecules/cell in log phase SD medium.
  • SIMILARITY: Belongs to the RNA polymerase beta chain family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M15693; AAA68096.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U55020; AAC49637.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z75059; CAA99357.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF527884; AAP57849.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A25884; A25884.
RefSeq NP_014794.1; -.
3D structure databases
PDB
1I3Q; X-ray; 3.10 A; B=1-1224.[ExPASy / RCSB / EBI]
1I50; X-ray; 2.80 A; B=1-1224.[ExPASy / RCSB / EBI]
1I6H; X-ray; 3.30 A; B=1-1224.[ExPASy / RCSB / EBI]
1K83; X-ray; 2.80 A; B=1-1224.[ExPASy / RCSB / EBI]
1NIK; X-ray; 4.10 A; B=1-1224.[ExPASy / RCSB / EBI]
1NT9; X-ray; 4.20 A; B=1-1224.[ExPASy / RCSB / EBI]
1PQV; X-ray; 3.80 A; B=1-1224.[ExPASy / RCSB / EBI]
1R5U; X-ray; 4.50 A; B=1-1224.[ExPASy / RCSB / EBI]
1R9S; X-ray; 4.25 A; B=1-1224.[ExPASy / RCSB / EBI]
1R9T; X-ray; 3.50 A; B=1-1224.[ExPASy / RCSB / EBI]
1SFO; X-ray; 3.61 A; B=1-1224.[ExPASy / RCSB / EBI]
1TWA; X-ray; 3.20 A; B=1-1224.[ExPASy / RCSB / EBI]
1TWC; X-ray; 3.00 A; B=1-1224.[ExPASy / RCSB / EBI]
1TWF; X-ray; 2.30 A; B=1-1224.[ExPASy / RCSB / EBI]
1TWG; X-ray; 3.30 A; B=1-1224.[ExPASy / RCSB / EBI]
1TWH; X-ray; 3.40 A; B=1-1224.[ExPASy / RCSB / EBI]
1WCM; X-ray; 3.80 A; B=1-1224.[ExPASy / RCSB / EBI]
1Y1V; X-ray; 3.80 A; B=1-1224.[ExPASy / RCSB / EBI]
1Y1W; X-ray; 4.00 A; B=1-1224.[ExPASy / RCSB / EBI]
1Y1Y; X-ray; 4.00 A; B=1-1224.[ExPASy / RCSB / EBI]
1Y77; X-ray; 4.50 A; B=1-1224.[ExPASy / RCSB / EBI]
2B63; X-ray; 3.80 A; B=1-1224.[ExPASy / RCSB / EBI]
2B8K; X-ray; 4.15 A; B=1-1224.[ExPASy / RCSB / EBI]
2E2H; X-ray; 3.95 A; B=1-1224.[ExPASy / RCSB / EBI]
2E2I; X-ray; 3.41 A; B=1-1224.[ExPASy / RCSB / EBI]
2E2J; X-ray; 3.50 A; B=1-1224.[ExPASy / RCSB / EBI]
2JA5; X-ray; 3.80 A; B=1-1224.[ExPASy / RCSB / EBI]
2JA6; X-ray; 4.00 A; B=1-1224.[ExPASy / RCSB / EBI]
2JA7; X-ray; 3.80 A; B/N=1-1224.[ExPASy / RCSB / EBI]
2JA8; X-ray; 3.80 A; B=1-1224.[ExPASy / RCSB / EBI]
2NVQ; X-ray; 2.90 A; B=1-1224.[ExPASy / RCSB / EBI]
2NVT; X-ray; 3.36 A; B=1-1224.[ExPASy / RCSB / EBI]
2NVX; X-ray; 3.60 A; B=1-1224.[ExPASy / RCSB / EBI]
2NVY; X-ray; 3.40 A; B=1-1224.[ExPASy / RCSB / EBI]
2NVZ; X-ray; 4.30 A; B=1-1224.[ExPASy / RCSB / EBI]
2R7Z; X-ray; 3.80 A; B=1-1224.[ExPASy / RCSB / EBI]
2R92; X-ray; 3.80 A; B=1-1224.[ExPASy / RCSB / EBI]
2R93; X-ray; 4.00 A; B=1-1224.[ExPASy / RCSB / EBI]
2VUM; X-ray; 3.40 A; B=1-1224.[ExPASy / RCSB / EBI]
2YU9; X-ray; 3.40 A; B=1-1224.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1I3Q; -.
1I50; -.
1I6H; -.
1K83; -.
1NIK; -.
1NT9; -.
1PQV; -.
1R5U; -.
1R9S; -.
1R9T; -.
1SFO; -.
1TWA; -.
1TWC; -.
1TWF; -.
1TWG; -.
1TWH; -.
1WCM; -.
1Y1V; -.
1Y1W; -.
1Y1Y; -.
1Y77; -.
2B63; -.
2B8K; -.
2E2H; -.
2E2I; -.
2E2J; -.
2JA5; -.
2JA6; -.
2JA7; -.
2JA8; -.
2NVQ; -.
2NVT; -.
2NVX; -.
2NVY; -.
2NVZ; -.
2R7Z; -.
2R92; -.
2R93; -.
2VUM; -.
2YU9; -.
ModBase P08518.
Protein-protein interaction databases
DIP DIP:14N; -.
Organism-specific databases
CYGD YOR151c; -.
SGD S000005677; RPB2.
Yeast-GFP YOR151C.
Gene expression databases
ArrayExpress P08518; -.
GermOnline YOR151C; Saccharomyces cerevisiae.
Ontologies
GO
GO:0005665; Cellular component: DNA-directed RNA polymerase II, core complex (traceable author statement from SGD).
GO:0005739; Cellular component: mitochondrion (inferred from direct assay from SGD).
GO:0003899; Molecular function: DNA-directed RNA polymerase activity (traceable author statement from SGD).
GO:0006366; Biological process: transcription from RNA polymerase II promoter (traceable author statement from SGD).
QuickGo view.
Family and domain databases
InterPro IPR015712; DNA-dir_RNA_pol_su2.
IPR007120; DNA-dir_RNA_pol_su2_6.
IPR007121; RNA_pol_bsu_CS.
IPR007644; RNA_pol_bsu_protrusion.
IPR007642; RNA_pol_Rpb2_2.
IPR007645; RNA_pol_Rpb2_3.
IPR007646; RNA_pol_Rpb2_4.
IPR007647; RNA_pol_Rpb2_5.
IPR007641; RNA_pol_Rpb2_7.
Graphical view of domain structure.
PANTHER PTHR20856; RNA_pol_I_sub2; 1.
Pfam PF04563; RNA_pol_Rpb2_1; 1.
PF04561; RNA_pol_Rpb2_2; 1.
PF04565; RNA_pol_Rpb2_3; 1.
PF04566; RNA_pol_Rpb2_4; 1.
PF04567; RNA_pol_Rpb2_5; 1.
PF00562; RNA_pol_Rpb2_6; 1.
PF04560; RNA_pol_Rpb2_7; 1.
Pfam graphical view of domain structure.
PROSITE PS01166; RNA_POL_BETA; 1.
BLOCKS P08518.
ProtoNet P08518.
Proteomic databases
PeptideAtlas P08518; -.
Genome annotation databases
Ensembl YOR151C; Saccharomyces cerevisiae. [Contig view]
GeneID 854322; -.
GenomeReviews Y13140_GR; YOR151C.
KEGG sce:YOR151C; -.
NMPDR fig|4932.3.peg.5899; -.
Phylogenomic databases
HOGENOM P08518; -.
Other
LinkHub P08518; -.
NextBio 976360; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Complete proteome; Direct protein sequencing; DNA-directed RNA polymerase; Magnesium; Metal-binding; Nucleotidyltransferase; Nucleus; Phosphoprotein; Transcription; Transferase; Zinc; Zinc-finger.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom    To Length Description FTId
CHAIN   1   1224  1224     DNA-directed RNA polymerase II subunit RPB2. PRO_0000048091
ZN_FING   1163   1185  23     C4-type. 
REGION   467    478  12     Fork loop 1. 
METAL   837    837        Magnesium; shared with RPB1. 
METAL   1163   1163        Zinc. 
METAL   1166   1166        Zinc. 
METAL   1182   1182        Zinc. 
METAL   1185   1185        Zinc. 
MOD_RES   915    915        Phosphothreonine. 
MOD_RES   916    916        Phosphothreonine. 
MOD_RES   919    919        Phosphoserine. 
CONFLICT   1003   1006        AEGI -> RRRY (in Ref. 1; AAA68096). 
HELIX   29     41  13      
HELIX   45     56  12      
HELIX   58     64  7      
STRAND   96    102  7      
STRAND   105    107  3      
STRAND   109    111  3      
HELIX   114    119  6      
STRAND   125    129  5      
STRAND   166    171  6      
HELIX   180    182  3      
HELIX   186    191  6      
STRAND   202    205  4      
STRAND   208    212  5      
STRAND   214    218  5      
STRAND   224    227  4      
STRAND   232    241  10      
STRAND   245    247  3      
STRAND   253    260  8      
STRAND   269    272  4      
HELIX   282    288  7      
HELIX   294    301  8      
HELIX   308    320  13      
TURN   321    323  3      
HELIX   327    336  10      
HELIX   345    358  14      
TURN   362    364  3      
STRAND   367    369  3      
HELIX   371    389  19      
HELIX   401    403  3      
STRAND   404    407  4      
HELIX   409    433  25      
HELIX   451    463  13      
STRAND   480    482  3      
HELIX   488    495  8      
STRAND   497    499  3      
HELIX   516    518  3      
TURN   519    521  3      
HELIX   530    532  3      
STRAND   536    539  4      
HELIX   552    560  9      
HELIX   566    568  3      
HELIX   571    573  3      
STRAND   578    582  5      
STRAND   585    591  7      
HELIX   593    606  14      
STRAND   607    609  3      
STRAND   614    618  5      
TURN   619    622  4      
STRAND   623    627  5      
STRAND   633    641  9      
STRAND   650    652  3      
HELIX   655    666  12      
HELIX   681    686  6      
STRAND   689    694  6      
HELIX   695    698  4      
STRAND   703    706  4      
HELIX   707    710  4      
HELIX   745    748  4      
HELIX   753    755  3      
STRAND   756    758  3