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UniProtKB/Swiss-Prot entry P07293


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CAC1S_RABIT
Primary accession number P07293
Secondary accession numbers None
Integrated into Swiss-Prot on April 1, 1988
Sequence was last modified on April 1, 1988 (Sequence version 1)
Annotations were last modified on    April 8, 2008 (Entry version 85)
Name and origin of the protein
Protein name Voltage-dependent L-type calcium channel subunit alpha-1S
Synonyms Voltage-gated calcium channel subunit alpha Cav1.1
Calcium channel, L type, alpha-1 polypeptide, isoform 3, skeletal muscle
Gene name
Name: CACNA1S
Synonyms: CACH1, CACNL1A3
From
Oryctolagus cuniculus (Rabbit) [TaxID: 9986] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND PARTIAL PROTEIN SEQUENCE.
TISSUE=Skeletal muscle;
DOI=10.1038/328313a0; PubMed=3037387 [NCBI, ExPASy, EBI, Israel, Japan]
Tanabe T., Takeshima H., Mikami A., Flockerzi V., Takahashi H., Kangawa K., Kojima M., Matsuo H., Hirose T., Numa S.;
"Primary structure of the receptor for calcium channel blockers from skeletal muscle.";
Nature 328:313-318(1987).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Skeletal muscle;
PubMed=2458626 [NCBI, ExPASy, EBI, Israel, Japan]
Ellis S.B., Williams M.E., Ways N.R., Brenner R., Sharp A.H., Leung A.T., Campbell K.P., McKenna E., Koch W.J., Hui A., Schwartz A., Harpold M.M.;
"Sequence and expression of mRNAs encoding the alpha 1 and alpha 2 subunits of a DHP-sensitive calcium channel.";
Science 241:1661-1664(1988).
[3]
BETA-SUBUNIT BINDING DOMAIN.
DOI=10.1038/368067a0; PubMed=7509046 [NCBI, ExPASy, EBI, Israel, Japan]
Pragnell M., de Waard M., Mori Y., Tanabe T., Snutch T.P., Campbell K.P.;
"Calcium channel beta-subunit binds to a conserved motif in the I-II cytoplasmic linker of the alpha 1-subunit.";
Nature 368:67-70(1994).
[4]
PHENYLALKYLAMINE-BINDING SITE.
PubMed=2174553 [NCBI, ExPASy, EBI, Israel, Japan]
Striessnig J., Glossmann H., Catterall W.A.;
"Identification of a phenylalkylamine binding region within the alpha 1 subunit of skeletal muscle Ca2+ channels.";
Proc. Natl. Acad. Sci. U.S.A. 87:9108-9112(1990).
[5]
DIHYDROPYRIDINE-BINDING SITE.
PubMed=1656465 [NCBI, ExPASy, EBI, Israel, Japan]
Nakayama H., Taki M., Striessnig J., Glossmann H., Catterall W.A., Kanaoka Y.;
"Identification of 1,4-dihydropyridine binding regions within the alpha 1 subunit of skeletal muscle Ca2+ channels by photoaffinity labeling with diazipine.";
Proc. Natl. Acad. Sci. U.S.A. 88:9203-9207(1991).
[6]
DIHYDROPYRIDINE-BINDING SITE.
PubMed=1660150 [NCBI, ExPASy, EBI, Israel, Japan]
Striessnig J., Murphy B.J., Catterall W.A.;
"Dihydropyridine receptor of L-type Ca2+ channels: identification of binding domains for [3H](+)-PN200-110 and [3H]azidopine within the alpha 1 subunit.";
Proc. Natl. Acad. Sci. U.S.A. 88:10769-10773(1991).
[7]
PHOSPHORYLATION AT SER-687 AND SER-1617.
PubMed=2844809 [NCBI, ExPASy, EBI, Israel, Japan]
Roehrkasten A., Meyer H.E., Nastainczyk W., Sieber M., Hofmann F.;
"CAMP-dependent protein kinase rapidly phosphorylates serine-687 of the skeletal muscle receptor for calcium channel blockers.";
J. Biol. Chem. 263:15325-15329(1988).
[8]
PHOSPHORYLATION BY PKA.
PubMed=2549550 [NCBI, ExPASy, EBI, Israel, Japan]
Nunoki K., Florio V., Catterall W.A.;
"Activation of purified calcium channels by stoichiometric protein phosphorylation.";
Proc. Natl. Acad. Sci. U.S.A. 86:6816-6820(1989).
[9]
STRUCTURE BY NMR OF 671-690.
DOI=10.1074/jbc.275.16.11631; PubMed=10766780 [NCBI, ExPASy, EBI, Israel, Japan]
Casarotto M.G., Gibson F., Pace S.M., Curtis S.M., Mulcair M., Dulhunty A.F.;
"A structural requirement for activation of skeletal ryanodine receptors by peptides of the dihydropyridine receptor II-III loop.";
J. Biol. Chem. 275:11631-11637(2000).
[10]
X-RAY CRYSTALLOGRAPHY (2.2 ANGSTROMS) OF 34-415 IN COMPLEX WITH CACNA1S.
DOI=10.1016/S0896-6273(04)00250-8; PubMed=15134636 [NCBI, ExPASy, EBI, Israel, Japan]
Opatowsky Y., Chen C.-C., Campbell K.P., Hirsch J.A.;
"Structural analysis of the voltage-dependent calcium channel beta subunit functional core and its complex with the alpha1 interaction domain.";
Neuron 42:387-399(2004).
Comments
  • FUNCTION: Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1S gives rise to L-type calcium currents. Long-lasting (L-type) calcium channels belong to the "high-voltage activated" (HVA) group. They are blocked by dihydropyridines (DHP), phenylalkylamines, benzothiazepines, and by omega-agatoxin-IIIA (omega-Aga-IIIA). They are however insensitive to omega-conotoxin-GVIA (omega-CTx-GVIA) and omega-agatoxin-IVA (omega-Aga-IVA). Calcium channels containing the alpha-1S subunit play an important role in excitation-contraction coupling in skeletal muscle.
  • SUBUNIT: Multisubunit complex consisting of alpha-1, alpha-2, beta and delta subunits in a 1:1:1:1 ratio. The channel activity is directed by the pore-forming and voltage-sensitive alpha-1 subunit. In many cases, this subunit is sufficient to generate voltage-sensitive calcium channel activity. The auxiliary subunits beta and alpha-2/delta linked by a disulfide bridge regulate the channel activity. An additional gamma subunit is present only in skeletal muscle L-type channel. Interacts with JSRP1 (By similarity).
  • SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein.
  • TISSUE SPECIFICITY: Skeletal muscle specific.
  • DOMAIN: Each of the four internal repeats contains five hydrophobic transmembrane segments (S1, S2, S3, S5, S6) and one positively charged transmembrane segment (S4). S4 segments probably represent the voltage-sensor and are characterized by a series of positively charged amino acids at every third position.
  • DOMAIN: The loop between repeats II and III interacts with the ryanodine receptor, and is therefore important for calcium release from the endoplasmic reticulum necessary for muscle contraction.
  • PTM: The alpha-1S subunit is found in two isoforms in the skeletal muscle: a minor form of 212 kDa containing the complete amino acid sequence, and a major form of 190 kDa derived from the full-length form by post-translational proteolysis close to Phe-1690.
  • PTM: Both the minor and major forms are phosphorylated in vitro by PKA. Phosphorylation by PKA activates the calcium channel.
  • SIMILARITY: Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family [view classification].
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X05921; CAA29355.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M23919; AAA31159.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A30063; A30063.
RefSeq NP_001095190.1; -.
UniGene Ocu.1826
3D structure databases
PDB
1DU1; NMR; -; A=671-690.[ExPASy / RCSB / EBI]
1T3L; X-ray; 2.20 A; B=357-374.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1DU1; -.
1T3L; -.
DisProt DP00228; -.
DP00440; -.
ModBase P07293.
Family and domain databases
InterPro IPR005821; Ion_trans.
IPR014873; VDCC_a1su_IQ.
IPR005450; VDCC_L_a1ssu.
IPR005446; VDCC_L_a1su.
IPR002077; VDCCAlpha1.
Graphical view of domain structure.
PANTHER PTHR10037:SF52; LVDCCAlpha1S; 1.
Pfam PF08763; Ca_chan_IQ; 1.
PF00520; Ion_trans; 4.
Pfam graphical view of domain structure.
PRINTS PR00167; CACHANNEL.
PR01630; LVDCCALPHA1.
PR01634; LVDCCALPHA1S.
BLOCKS P07293.
Genome annotation databases
GeneID 100009585; -.
Other
ProtoNet P07293.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Calcium; Calcium channel; Calcium transport; Direct protein sequencing; Glycoprotein; Ion transport; Ionic channel; Membrane; Phosphoprotein; Polymorphism; Repeat; Transmembrane; Transport; Voltage-gated channel.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom    To Length Description FTId
CHAIN   1   1873  1873     Voltage-dependent L-type calcium channel subunit alpha-1S. PRO_0000053945
TOPO_DOM   1     51  51     Cytoplasmic (Potential). 
TRANSMEM   52     70  19     S1 of repeat I (Potential). 
TOPO_DOM   71     88  18     Extracellular (Potential). 
TRANSMEM   89    108  20     S2 of repeat I (Potential). 
TOPO_DOM   109    120  12     Cytoplasmic (Potential). 
TRANSMEM   121    139  19     S3 of repeat I (Potential). 
TOPO_DOM   140    160  21     Extracellular (Potential). 
TRANSMEM   161    179  19     S4 of repeat I (Potential). 
TOPO_DOM   180    198  19     Cytoplasmic (Potential). 
TRANSMEM   199    218  20     S5 of repeat I (Potential). 
TOPO_DOM   219    309  91     Extracellular (Potential). 
TRANSMEM   310    334  25     S6 of repeat I (Potential). 
TOPO_DOM   335    432  98     Cytoplasmic (Potential). 
TRANSMEM   433    451  19     S1 of repeat II (Potential). 
TOPO_DOM   452    466  15     Extracellular (Potential). 
TRANSMEM   467    486  20     S2 of repeat II (Potential). 
TOPO_DOM   487    494  8     Cytoplasmic (Potential). 
TRANSMEM   495    513  19     S3 of repeat II (Potential). 
TOPO_DOM   514    523  10     Extracellular (Potential). 
TRANSMEM   524    542  19     S4 of repeat II (Potential). 
TOPO_DOM   543    561  19     Cytoplasmic (Potential). 
TRANSMEM   562    581  20     S5 of repeat II (Potential). 
TOPO_DOM   582    636  55     Extracellular (Potential). 
TRANSMEM   637    661  25     S6 of repeat II (Potential). 
TOPO_DOM   662    799  138     Cytoplasmic (Potential). 
TRANSMEM   800    818  19     S1 of repeat III (Potential). 
TOPO_DOM   819    834  16     Extracellular (Potential). 
TRANSMEM   835    854  20     S2 of repeat III (Potential). 
TOPO_DOM   855    866  12     Cytoplasmic (Potential). 
TRANSMEM   867    885  19     S3 of repeat III (Potential). 
TOPO_DOM   886    892  7     Extracellular (Potential). 
TRANSMEM   893    911  19     S4 of repeat III (Potential). 
TOPO_DOM   912    930  19     Cytoplasmic (Potential). 
TRANSMEM   931    950  20     S5 of repeat III (Potential). 
TOPO_DOM   951   1040  90     Extracellular (Potential). 
TRANSMEM   1041   1065  25     S6 of repeat III (Potential). 
TOPO_DOM   1066   1118  53     Cytoplasmic (Potential). 
TRANSMEM   1119   1137  19     S1 of repeat IV (Potential). 
TOPO_DOM   1138   1152  15     Extracellular (Potential). 
TRANSMEM   1153   1172  20     S2 of repeat IV (Potential). 
TOPO_DOM   1173   1180  8     Cytoplasmic (Potential). 
TRANSMEM   1181   1199  19     S3 of repeat IV (Potential). 
TOPO_DOM   1200   1231  32     Extracellular (Potential). 
TRANSMEM   1232   1250  19     S4 of repeat IV (Potential). 
TOPO_DOM   1251   1269  19     Cytoplasmic (Potential). 
TRANSMEM   1270   1289  20     S5 of repeat IV (Potential). 
TOPO_DOM   1290   1356  67     Extracellular (Potential). 
TRANSMEM   1357   1381  25     S6 of repeat IV (Potential). 
TOPO_DOM   1382   1873  492     Cytoplasmic (Potential). 
REPEAT   38    337  300     I. 
REPEAT   418    664  247     II. 
REPEAT   786   1068  283     III. 
REPEAT   1105   1384  280     IV. 
CA_BIND   1410   1421  12     By similarity. 
REGION   357    374  18     Binding to the beta subunit. 
REGION   988   1077  90     Dihydropyridine binding. 
REGION   1337   1403  67     Dihydropyridine binding. 
REGION   1349   1391  43     Phenylalkylamine binding. 
COMPBIAS   562    568  7     Poly-Leu. 
SITE   292    292  1     Calcium ion selectivity and permeability (By similarity). 
SITE   614    614  1     Calcium ion selectivity and permeability (By similarity). 
SITE   1014   1014  1     Calcium ion selectivity and permeability (By similarity). 
SITE   1323   1323  1     Calcium ion selectivity and permeability (By similarity). 
SITE   1690   1691  2     Cleavage (Probable). 
MOD_RES   687    687        Phosphoserine; by PKA. 
MOD_RES   1392   1392        Phosphoserine; by PKA (Potential). 
MOD_RES   1617   1617        Phosphoserine; by PKA. 
CARBOHYD   79     79        N-linked (GlcNAc...) (Potential). 
CARBOHYD   257    257        N-linked (GlcNAc...) (Potential). 
VARIANT   165    165  1     R -> K. 
VARIANT   258    258  1     G -> D. 
VARIANT   1870   1870  1     P -> L. 
CONFLICT   694    694        T -> R (in Ref. 2; AAA31159). 
CONFLICT   1808   1808        T -> M (in Ref. 2; AAA31159). 
CONFLICT   1815   1815        A -> V (in Ref. 2; AAA31159). 
CONFLICT   1835   1835        A -> E (in Ref. 2; AAA31159). 
HELIX   359    372  14      
HELIX   672    677  6      
TURN   678    681  4      
Sequence information
Length: 1873 AA [This is the length of the unprocessed precursor] Molecular weight: 212029 Da [This is the MW of the unprocessed precursor] CRC64: 047B10D1946B0796 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MEPSSPQDEG LRKKQPKKPL PEVLPRPPRA LFCLTLQNPL RKACISIVEW KPFETIILLT 

        70         80         90        100        110        120 
IFANCVALAV YLPMPEDDNN SLNLGLEKLE YFFLTVFSIE AAMKIIAYGF LFHQDAYLRS 

       130        140        150        160        170        180 
GWNVLDFIIV FLGVFTAILE QVNVIQSNTA PMSSKGAGLD VKALRAFRVL RPLRLVSGVP 

       190        200        210        220        230        240 
SLQVVLNSIF KAMLPLFHIA LLVLFMVIIY AIIGLELFKG KMHKTCYYIG TDIVATVENE 

       250        260        270        280        290        300 
KPSPCARTGS GRPCTINGSE CRGGWPGPNH GITHFDNFGF SMLTVYQCIT MEGWTDVLYW 

       310        320        330        340        350        360 
VNDAIGNEWP WIYFVTLILL GSFFILNLVL GVLSGEFTKE REKAKSRGTF QKLREKQQLE 

       370        380        390        400        410        420 
EDLRGYMSWI TQGEVMDVED LREGKLSLEE GGSDTESLYE IEGLNKIIQF IRHWRQWNRV 

       430        440        450        460        470        480 
FRWKCHDLVK SRVFYWLVIL IVALNTLSIA SEHHNQPLWL THLQDIANRV LLSLFTIEML 

       490        500        510        520        530        540 
LKMYGLGLRQ YFMSIFNRFD CFVVCSGILE LLLVESGAMT PLGISVLRCI RLLRLFKITK 

       550        560        570        580        590        600 
YWTSLSNLVA SLLNSIRSIA SLLLLLFLFI IIFALLGMQL FGGRYDFEDT EVRRSNFDNF 

       610        620        630        640        650        660 
PQALISVFQV LTGEDWNSVM YNGIMAYGGP SYPGVLVCIY FIILFVCGNY ILLNVFLAIA 

       670        680        690        700        710        720 
VDNLAEAESL TSAQKAKAEE RKRRKMSRGL PDKTEEEKSV MAKKLEQKPK GEGIPTTAKL 

       730        740        750        760        770        780 
KVDEFESNVN EVKDPYPSAD FPGDDEEDEP EIPVSPRPRP LAELQLKEKA VPIPEASSFF 

       790        800        810        820        830        840 
IFSPTNKVRV LCHRIVNATW FTNFILLFIL LSSAALAAED PIRAESVRNQ ILGYFDIAFT 

       850        860        870        880        890        900 
SVFTVEIVLK MTTYGAFLHK GSFCRNYFNI LDLLVVAVSL ISMGLESSTI SVVKILRVLR 

       910        920        930        940        950        960 
VLRPLRAINR AKGLKHVVQC VFVAIRTIGN IVLVTTLLQF MFACIGVQLF KGKFFSCNDL 

       970        980        990       1000       1010       1020 
SKMTEEECRG YYYVYKDGDP TQMELRPRQW IHNDFHFDNV LSAMMSLFTV STFEGWPQLL 

      1030       1040       1050       1060       1070       1080 
YRAIDSNEED MGPVYNNRVE MAIFFIIYII LIAFFMMNIF VGFVIVTFQE QGETEYKNCE 

      1090       1100       1110       1120       1130       1140 
LDKNQRQCVQ YALKARPLRC YIPKNPYQYQ VWYVVTSSYF EYLMFALIML NTICLGMQHY 

      1150       1160       1170       1180       1190       1200 
HQSEEMNHIS DILNVAFTII FTLEMILKLL AFKARGYFGD PWNVFDFLIV IGSIIDVILS 

      1210       1220       1230       1240       1250       1260 
EIDTFLASSG GLYCLGGGCG NVDPDESARI SSAFFRLFRV MRLIKLLSRA EGVRTLLWTF 

      1270       1280       1290       1300       1310       1320 
IKSFQALPYV ALLIVMLFFI YAVIGMQMFG KIALVDGTQI NRNNNFQTFP QAVLLLFRCA 

      1330       1340       1350       1360       1370       1380 
TGEAWQEILL ACSYGKLCDP ESDYAPGEEY TCGTNFAYYY FISFYMLCAF LIINLFVAVI 

      1390       1400       1410       1420       1430       1440 
MDNFDYLTRD WSILGPHHLD EFKAIWAEYD PEAKGRIKHL DVVTLLRRIQ PPLGFGKFCP 

      1450       1460       1470       1480       1490       1500 
HRVACKRLVG MNMPLNSDGT VTFNATLFAL VRTALKIKTE GNFEQANEEL RAIIKKIWKR 

      1510       1520       1530       1540       1550       1560 
TSMKLLDQVI PPIGDDEVTV GKFYATFLIQ EHFRKFMKRQ EEYYGYRPKK DTVQIQAGLR 

      1570       1580       1590       1600       1610       1620 
TIEEEAAPEI RRTISGDLTA EEELERAMVE AAMEERIFRR TGGLFGQVDT FLERTNSLPP 

      1630       1640       1650       1660       1670       1680 
VMANQRPLQF AEIEMEELES PVFLEDFPQD ARTNPLARAN TNNANANVAY GNSNHSNNQM 

      1690       1700       1710       1720       1730       1740 
FSSVHCEREF PGEAETPAAG RGALSHSHRA LGPHSKPCAG KLNGQLVQPG MPINQAPPAP 

      1750       1760       1770       1780       1790       1800 
CQQPSTDPPE RGQRRTSLTG SLQDEAPQRR SSEGSTPRRP APATALLIQE ALVRGGLDTL 

      1810       1820       1830       1840       1850       1860 
AADAGFVTAT SQALADACQM EPEEVEVAAT ELLKARESVQ GMASVPGSLS RRSSLGSLDQ 

      1870 
VQGSQETLIP PRP 

P07293 in FASTA format

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