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UniProtKB/Swiss-Prot entry P07200


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name TGFB1_PIG
Primary accession number P07200
Secondary accession number P08832
Integrated into Swiss-Prot on April 1, 1988
Sequence was last modified on April 1, 1988 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 83)
Name and origin of the protein
Protein name Transforming growth factor beta-1 [Precursor]
Synonym TGF-beta-1
Contains Latency-associated peptide
     (LAP)
Gene name
Name: TGFB1
From
Sus scrofa (Pig) [TaxID: 9823] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Ovary;
DOI=10.1093/nar/15.7.3187; PubMed=3470708 [NCBI, ExPASy, EBI, Israel, Japan]
Derynck R., Rhee L.;
"Sequence of the porcine transforming growth factor-beta precursor.";
Nucleic Acids Res. 15:3187-3187(1987).
[2]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT VAL-114.
STRAIN=Miniature swine;
PubMed=2461367 [NCBI, ExPASy, EBI, Israel, Japan]
Kondaiah P., van Obberghen-Schilling E., Ludwig R.L., Dhar R., Sporn M.B., Roberts A.B.;
"cDNA cloning of porcine transforming growth factor-beta 1 mRNAs. Evidence for alternate splicing and polyadenylation.";
J. Biol. Chem. 263:18313-18317(1988).
[3]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT VAL-114.
DOI=10.1093/nar/16.17.8730; PubMed=3166520 [NCBI, ExPASy, EBI, Israel, Japan]
Jakowlew S.B., Dillard P.J., Sporn M.B., Roberts A.B.;
"Nucleotide sequence of chicken transforming growth factor-beta 1 (TGF-beta 1).";
Nucleic Acids Res. 16:8730-8730(1988).
[4]
SHOWS THAT SEQUENCE DESCRIBED IN PUBMED:3166520 ORIGINATES FROM PIG.
Jakowlew S.B.;
Unpublished observations (MAR-1996).
[5]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT VAL-114.
Wimmers K., Chomdej S., Ponsuksili S., Schellander K.;
"Polymorphism in the porcine transforming growth factor beta 1 gene.";
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases.
[6]
PROTEIN SEQUENCE OF 279-322.
DOI=10.1016/0092-8674(87)90192-9; PubMed=2879635 [NCBI, ExPASy, EBI, Israel, Japan]
Cheifetz S., Weatherbee J.A., Tsang M.L.S., Anderson J.K., Mole J.E., Lucas R., Massague J.;
"The transforming growth factor-beta system, a complex pattern of cross-reactive ligands and receptors.";
Cell 48:409-415(1987).
Comments
  • FUNCTION: Multifunctional protein that control proliferation, differentiation, and other functions in many cell types. Many cells synthesize TGFB1 and essentially all of them have specific receptors for this protein. It regulates the actions of many other growth factors and determines a positive or negative direction of their effects. It plays an important role in bone remodeling. It is a potent stimulator of osteoblastic bone formation, causing chemotaxis, proliferation and differentiation in committed osteoblasts (By similarity).
  • SUBUNIT: The inactive form consists of a TGFB1 homodimer non-covalently linked to a latency-associated peptide (LAP) homodimer. The inactive complex can contain a latent TGFB1-binding protein. The active form is a homodimer of mature TGFB1; disulfide-linked. Heterodimers of TGFB1/TGFB2 have been found in bone. Interacts with CD109 and DPT (By similarity).
  • INTERACTION:
    Q9Y6C2:EMILIN1 (xeno); NbExp=1; IntAct=EBI-907660, EBI-902920;
    Q99K41:Emilin1 (xeno); NbExp=2; IntAct=EBI-907660, EBI-906561;
    P37173:TGFBR2 (xeno); NbExp=1; IntAct=EBI-907660, EBI-296151;
  • SUBCELLULAR LOCATION: Secreted.
  • PTM: Glycosylated (By similarity).
  • PTM: The precursor is cleaved into mature TGF-beta-1 and LAP, which remains non-covalently linked to mature TGF-beta-1 rendering it inactive (By similarity).
  • SIMILARITY: Belongs to the TGF-beta family.
  • CAUTION: PubMed:3166520 sequence which was said to originate from chicken, seems (Ref.4) to originate from pig.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Y00111; CAA68291.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M23703; AAA64616.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X12373; CAA30933.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF461808; AAL57902.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A27512; A27512.
S01413; S01413.
RefSeq NP_999180.1; -.
UniGene Ssc.76
3D structure databases
HSSP P01137; 1KLA. [HSSP ENTRY / PDB]
SMR P07200; 279-390.
ModBase P07200.
Protein-protein interaction databases
IntAct P07200; -.
Ontologies
GO
GO:0005615; Cellular component: extracellular space (inferred from sequence or structural similarity from UniProtKB).
GO:0005578; Cellular component: proteinaceous extracellular matrix (inferred from sequence or structural similarity from UniProtKB).
GO:0016563; Molecular function: transcription activator activity (inferred from sequence or structural similarity from UniProtKB).
GO:0005160; Molecular function: transforming growth factor beta receptor binding (inferred from sequence or structural similarity from UniProtKB).
GO:0008219; Biological process: cell death (inferred from sequence or structural similarity from UniProtKB).
GO:0006954; Biological process: inflammatory response (inferred from sequence or structural similarity from UniProtKB).
GO:0048535; Biological process: lymph node development (inferred from sequence or structural similarity from UniProtKB).
GO:0008285; Biological process: negative regulation of cell proliferation (inferred from sequence or structural similarity from UniProtKB).
GO:0009887; Biological process: organ morphogenesis (inferred from sequence or structural similarity from UniProtKB).
GO:0008284; Biological process: positive regulation of cell proliferation (inferred from sequence or structural similarity from UniProtKB).
GO:0045893; Biological process: positive regulation of transcription, DNA-dependent (inferred from sequence or structural similarity from UniProtKB).
GO:0006468; Biological process: protein amino acid phosphorylation (inferred from sequence or structural similarity from UniProtKB).
GO:0051101; Biological process: regulation of DNA binding (inferred from sequence or structural similarity from UniProtKB).
GO:0042306; Biological process: regulation of protein import into nucleus (inferred from sequence or structural similarity from UniProtKB).
GO:0016202; Biological process: regulation of striated muscle development (inferred from sequence or structural similarity from UniProtKB).
GO:0001501; Biological process: skeletal system development (inferred from sequence or structural similarity from UniProtKB).
GO:0007179; Biological process: transforming growth factor beta receptor signaling pathway (inferred from sequence or structural similarity from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR002400; GF_cysknot.
IPR016319; TGF-beta.
IPR003911; TGF_TGFb.
IPR001839; TGFb.
IPR003939; TGFb1.
IPR001111; TGFb_N.
IPR015615; TGFbeta.
Graphical view of domain structure.
PANTHER PTHR11848; TGFbeta; 1.
Pfam PF00019; TGF_beta; 1.
PF00688; TGFb_propeptide; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001787; TGF-beta; 1.
PRINTS PR00438; GFCYSKNOT.
PR01423; TGFBETA.
PR01424; TGFBETA1.
ProDom PD000357; TGFb; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00204; TGFB; 1.
SMART graphical view of domain structure.
PROSITE PS00250; TGF_BETA_1; 1.
PS51362; TGF_BETA_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P07200.
ProtoNet P07200.
Genome annotation databases
GeneID 397078; -.
KEGG ssc:397078; -.
Phylogenomic databases
HOVERGEN P07200; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cleavage on pair of basic residues; Direct protein sequencing; Glycoprotein; Growth factor; Mitogen; Polymorphism; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    29  29     By similarity. 
CHAIN   30   278  249     Latency-associated peptide. PRO_0000033768
CHAIN   279   390  112     Transforming growth factor beta-1. PRO_0000033769
MOTIF   244   246  3     Cell attachment site (Potential). 
CARBOHYD   82    82        N-linked (GlcNAc...) (By similarity). 
CARBOHYD   136   136        N-linked (GlcNAc...) (By similarity). 
CARBOHYD   176   176        N-linked (GlcNAc...) (By similarity). 
DISULFID   285   294        By similarity. 
DISULFID   293   356        By similarity. 
DISULFID   322   387        By similarity. 
DISULFID   326   389        By similarity. 
DISULFID   355   355        Interchain (By similarity). 
VARIANT   114   114  1     L -> V. 
CONFLICT   6     7        LR -> PG (in Ref. 3; CAA30933). 
CONFLICT   180   180        R -> G (in Ref. 3; CAA30933). 
CONFLICT   237   237        N -> NA (in Ref. 3; CAA30933). 
Sequence information
Length: 390 AA [This is the length of the unprocessed precursor] Molecular weight: 44294 Da [This is the MW of the unprocessed precursor] CRC64: A6E2C3659FC384E6 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPPSGLRLLP LLLPLLWLLV LTPGRPAAGL STCKTIDMEL VKRKRIEAIR GQILSKLRLA 

        70         80         90        100        110        120 
SPPSQGDVPP GPLPEAVLAL YNSTRDRVAG ESVEPEPEPE ADYYAKEVTR VLMLESGNQI 

       130        140        150        160        170        180 
YDKFKGTPHS LYMLFNTSEL REAVPEPVLL SRAELRLLRL KLKVEQHVEL YQKYSNDSWR 

       190        200        210        220        230        240 
YLSNRLLAPS DSPEWLSFDV TGVVRQWLTR REAIEGFRLS AHCSCDSKDN TLHVEINGFN 

       250        260        270        280        290        300 
SGRRGDLATI HGMNRPFLLL MATPLERAQH LHSSRHRRAL DTNYCFSSTE KNCCVRQLYI 

       310        320        330        340        350        360 
DFRKDLGWKW IHEPKGYHAN FCLGPCPYIW SLDTQYSKVL ALYNQHNPGA SAAPCCVPQA 

       370        380        390 
LEPLPIVYYV GRKPKVEQLS NMIVRSCKCS 

P07200 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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