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UniProtKB/Swiss-Prot entry P07152


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name MMP10_RAT
Primary accession number P07152
Secondary accession numbers None
Integrated into Swiss-Prot on April 1, 1988
Sequence was last modified on April 1, 1988 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 86)
Name and origin of the protein
Protein name Stromelysin-2 [Precursor]
Synonyms SL-2
EC 3.4.24.22
Matrix metalloproteinase-10
MMP-10
Transin-2
Transformation-associated protein 34A
Gene name
Name: Mmp10
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
DOI=10.1093/nar/15.3.1139; PubMed=3547333 [NCBI, ExPASy, EBI, Israel, Japan]
Breathnach R., Matrisian L.M., Gesnel M.-C., Staub A., Leroy P.;
"Sequences coding for part of oncogene-induced transin are highly conserved in a related rat gene.";
Nucleic Acids Res. 15:1139-1151(1987).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=1370458 [NCBI, ExPASy, EBI, Israel, Japan]
Chan J.C., Scanlon M., Zhang H.Z., Jia L.B., Yu D., Hung M.C., French M., Eastman E.M.;
"Molecular cloning and characterization of v-mos-activated transformation-associated proteins.";
J. Biol. Chem. 267:1099-1103(1992).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X05083; CAA28739.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M65253; AAA42202.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR B26403; KCRTS2.
RefSeq NP_598198.1; -.
UniGene Rn.9946
3D structure databases
HSSP P08254; 1HY7. [HSSP ENTRY / PDB]
ModBase P07152.
Protein family/group databases
MEROPS M10.011; -.
Organism-specific databases
RGD 620192; Mmp10.
Gene expression databases
ArrayExpress P07152; -.
GermOnline ENSRNOG00000032832; Rattus norvegicus.
Ontologies
GO
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0030574; Biological process: collagen catabolic process (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR000585; Hemopexin.
IPR001818; Pept_M10A_M12B.
IPR016293; Pept_M10A_matrix.
IPR006025; Pept_M_Zn_BS.
IPR006026; Peptidase_M.
IPR002477; Peptidoglycan-bd-like.
Graphical view of domain structure.
Gene3D G3DSA:2.110.10.10; Hemopexin; 1.
Pfam PF00045; Hemopexin; 4.
PF00413; Peptidase_M10; 1.
PF01471; PG_binding_1; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001191; Peptidase_M10A_matrix; 1.
PRINTS PR00138; MATRIXIN.
SMART SM00120; HX; 4.
SM00235; ZnMc; 1.
SMART graphical view of domain structure.
PROSITE PS00546; CYSTEINE_SWITCH; 1.
PS00024; HEMOPEXIN; 1.
PS00142; ZINC_PROTEASE; 1.
BLOCKS P07152.
ProtoNet P07152.
Genome annotation databases
Ensembl ENSRNOG00000032832; Rattus norvegicus. [Contig view]
GeneID 117061; -.
KEGG rno:117061; -.
Phylogenomic databases
HOVERGEN P07152; -.
Other
NextBio 619922; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Collagen degradation; Extracellular matrix; Hydrolase; Metal-binding; Metalloprotease; Protease; Repeat; Secreted; Signal; Zinc; Zymogen.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    17  17     Probable. 
PROPEP   18    99  82     Activation peptide (By similarity). PRO_0000028768
CHAIN   100   476  377     Stromelysin-2. PRO_0000028769
DOMAIN   295   337  43     Hemopexin-like 1. 
DOMAIN   339   382  44     Hemopexin-like 2. 
DOMAIN   387   434  48     Hemopexin-like 3. 
DOMAIN   436   476  41     Hemopexin-like 4. 
MOTIF   90    97  8     Cysteine switch (By similarity). 
ACT_SITE   219   219        By similarity. 
METAL   92    92        Zinc; in inhibited form (By similarity). 
METAL   218   218        Zinc; catalytic (By similarity). 
METAL   222   222        Zinc; catalytic (By similarity). 
METAL   228   228        Zinc; catalytic (By similarity). 
DISULFID   289   476        By similarity. 
Sequence information
Length: 476 AA [This is the length of the unprocessed precursor] Molecular weight: 54222 Da [This is the MW of the unprocessed precursor] CRC64: B556B6FB1D8BA7EE [This is a checksum on the sequence]
        10         20         30         40         50         60 
MEPLAILVLL CFPICSAYPL HGAVRQDHST MDLAQQYLEK YYNFRKNEKQ FFKRKDSSPV 

        70         80         90        100        110        120 
VKKIEEMQKF LGLEMTGKLD SNTVEMMHKP RCGVPDVGGF STFPGSPKWR KNHISYRIVN 

       130        140        150        160        170        180 
YTLDLPRESV DSAIERALKV WEEVTPLTFS RISEGEADIM ISFAVGEHGD FYPFDGVGQS 

       190        200        210        220        230        240 
LAHAYPPGPG FYGDAHFDDD EKWSLGPSGT NLFLVAAHEL GHSLGLFHSN NKESLMYPVY 

       250        260        270        280        290        300 
RFSTSQANIR LSQDDIEGIQ SLYGARPSSD ATVVPVPSVS PKPETPVKCD PALSFDAVTM 

       310        320        330        340        350        360 
LRGEFLFFKD RHFWRRTQWN PEPEFHLISA FWPSLPSGLD AAYEANNKDR VLIFKGSQFW 

       370        380        390        400        410        420 
AVRGNEVQAG YPKRIHTLGF PPTVKKIDAA VFEKEKKKTY FFVGDKYWRF DETRQLMDKG 

       430        440        450        460        470 
FPRLITDDFP GIEPQVDAVL HAFGFFYFFC GSSQFEFDPN ARTVTHTLKS NSWLLC 

P07152 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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