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UniProtKB/Swiss-Prot entry P07148


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name FABPL_HUMAN
Primary accession number P07148
Secondary accession numbers None
Integrated into Swiss-Prot on April 1, 1988
Sequence was last modified on April 1, 1988 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 88)
Name and origin of the protein
Protein name Fatty acid-binding protein, liver
Synonym L-FABP
Gene name
Name: FABP1
Synonyms: FABPL
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=3838309 [NCBI, ExPASy, EBI, Israel, Japan]
Chan L., Wei C.-F., Li W.-H., Yang C.-Y., Ratner P., Pownall H., Gotto A.M. Jr., Smith L.C.;
"Human liver fatty acid binding protein cDNA and amino acid sequence. Functional and evolutionary implications.";
J. Biol. Chem. 260:2629-2632(1985).
[2]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT ALA-94.
PubMed=3838313 [NCBI, ExPASy, EBI, Israel, Japan]
Lowe J.B., Boguski M.S., Sweetser D.A., Elshourbagy N.A., Taylor J.M., Gordon J.I.;
"Human liver fatty acid binding protein. Isolation of a full length cDNA and comparative sequence analyses of orthologous and paralogous proteins.";
J. Biol. Chem. 260:3413-3417(1985).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Colon, Kidney, and Stomach;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
STRUCTURE BY NMR.
DOI=10.1021/ja071442e; PubMed=17536800 [NCBI, ExPASy, EBI, Israel, Japan]
Xu Y., Long D., Yang D.;
"Rapid data collection for protein structure determination by NMR spectroscopy.";
J. Am. Chem. Soc. 129:7722-7723(2007).
[5]
X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS).
Structural genomics consortium (SGC);
"Crystal structure of human FABP1.";
Submitted (DEC-2005) to the PDB data bank.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M10617; AAA52419.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M10050; AAA52418.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC032801; AAH32801.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A22289; FZHUL.
RefSeq NP_001434.1; -.
UniGene Hs.380135
3D structure databases
PDB
2F73; X-ray; 2.50 A; A/B/C/D/E/F/G/H=1-127.[ExPASy / RCSB / EBI]
2PY1; NMR; -; A=1-127.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 2F73; -.
2PY1; -.
ModBase P07148.
PTM databases
PhosphoSite P07148; -.
2D gel databases
SWISS-2DPAGE P07148; -.
PMMA-2DPAGE P07148; -.
Siena-2DPAGE P07148; -.
Organism-specific databases
H-InvDB HIX0002246; -.
HGNC HGNC:3555; FABP1.
GenAtlas FABP1.
HPA CAB002305; -.
MIM 134650; gene. [NCBI / EBI]
PharmGKB PA27956; -.
GeneCards P07148.
Gene expression databases
ArrayExpress P07148; -.
CleanEx HS_FABP1; -.
GermOnline ENSG00000163586; Homo sapiens.
Ontologies
GO
GO:0009887; Biological process: organ morphogenesis (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR012674; Calycin.
IPR000463; Fatty_acid_bd.
IPR000566; Lipocln_cytFABP.
Graphical view of domain structure.
Gene3D G3DSA:2.40.128.20; Calycin; 1.
PANTHER PTHR11955; Fatty_acid_bd; 1.
Pfam PF00061; Lipocalin; 1.
Pfam graphical view of domain structure.
PRINTS PR00178; FATTYACIDBP.
PROSITE PS00214; FABP; 1.
BLOCKS P07148.
Genome annotation databases
Ensembl ENSG00000163586; Homo sapiens. [Contig view]
GeneID 2168; -.
KEGG hsa:2168; -.
Phylogenomic databases
HOGENOM P07148; -.
HOVERGEN P07148; -.
Other
SOURCE FABP1; Homo sapiens.
ProtoNet P07148.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Acetylation; Cytoplasm; Lipid-binding; Phosphoprotein; Polymorphism; Transport.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   127  127     Fatty acid-binding protein, liver. PRO_0000067334
MOD_RES   1     1        N-acetylmethionine. 
MOD_RES   56    56        Phosphoserine (By similarity). 
VARIANT   54    54  1     A -> T (in dbSNP:rs1801273 [NCBI]). VAR_014662 [3D]
VARIANT   94    94  1     T -> A (in dbSNP:rs2241883 [NCBI]). VAR_022093 [3D]
STRAND   5    13  9      
HELIX   15    21  7      
HELIX   26    32  7      
STRAND   38    44  7      
STRAND   47    54  8      
STRAND   57    64  8      
STRAND   67    72  6      
STRAND   74    76  3      
STRAND   78    82  5      
STRAND   84    86  3      
TURN   87    89  3      
STRAND   90    95  6      
STRAND   98   105  8      
STRAND   108   115  8      
Sequence information
Length: 127 AA [This is the length of the unprocessed precursor] Molecular weight: 14208 Da [This is the MW of the unprocessed precursor] CRC64: 065DCEFB08DAB6B6 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSFSGKYQLQ SQENFEAFMK AIGLPEELIQ KGKDIKGVSE IVQNGKHFKF TITAGSKVIQ 

        70         80         90        100        110        120 
NEFTVGEECE LETMTGEKVK TVVQLEGDNK LVTTFKNIKS VTELNGDIIT NTMTLGDIVF 


KRISKRI 

P07148 in FASTA format

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