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UniProtKB/Swiss-Prot entry P06149


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DLD_ECOLI
Primary accession number P06149
Secondary accession number Q2MAU6
Integrated into Swiss-Prot on January 1, 1988
Sequence was last modified on January 23, 2007 (Sequence version 3)
Annotations were last modified on    November 4, 2008 (Entry version 81)
Name and origin of the protein
Protein name D-lactate dehydrogenase
Synonyms EC 1.1.1.28
Respiratory D-lactate dehydrogenase
Gene name
Name: dld
OrderedLocusNames: b2133, JW2121
From
Escherichia coli (strain K12) [TaxID: 83333] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=6386470 [NCBI, ExPASy, EBI, Israel, Japan]
Campbell H.D., Rogers B.L., Young I.G.;
"Nucleotide sequence of the respiratory D-lactate dehydrogenase gene of Escherichia coli.";
Eur. J. Biochem. 144:367-373(1984).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 2-18.
PubMed=3882663 [NCBI, ExPASy, EBI, Israel, Japan]
Rule G.S., Pratt E.A., Chin C.C.Q., Wold F., Ho C.;
"Overproduction and nucleotide sequence of the respiratory D-lactate dehydrogenase of Escherichia coli.";
J. Bacteriol. 161:1059-1068(1985).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / BHB2600;
Richterich P., Lakey N., Gryan G., Jaehn L., Mintz L., Robison K., Church G.M.;
"Automated multiplex sequencing of the E.coli genome.";
Submitted (OCT-1993) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1126/science.277.5331.1453; PubMed=9278503 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1474(1997).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1038/msb4100049; PubMed=16738553 [NCBI, ExPASy, EBI, Israel, Japan]
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
[6]
X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS).
DOI=10.1073/pnas.97.17.9413; PubMed=10944213 [NCBI, ExPASy, EBI, Israel, Japan]
Dym O., Pratt E.A., Ho C., Eisenberg D.;
"The crystal structure of D-lactate dehydrogenase, a peripheral membrane respiratory enzyme.";
Proc. Natl. Acad. Sci. U.S.A. 97:9413-9418(2000).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M10038; AAA23688.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X01067; CAA25531.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U00007; AAA60530.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U00096; AAC75194.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP009048; BAE76610.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A21893; DEECDL.
RefSeq AP_002730.1; -.
NP_416637.1; -.
3D structure databases
PDB
1F0X; X-ray; 1.90 A; A/B=1-571.[ExPASy / RCSB / EBI]
PDBsum 1F0X; -.
ModBase P06149.
Enzyme and pathway databases
BioCyc EcoCyc:DLACTDEHYDROGFAD-MON; -.
MetaCyc:DLACTDEHYDROGFAD-MON; -.
2D gel databases
ECO2DBASE H062.0; 6TH EDITION.
Organism-specific databases
EchoBASE EB0227; -.
EcoGene EG10231; dld.
Ontologies
GO
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR016172; D-lactate_DHase_C-sub1.
IPR016173; D-lactate_DHase_C-sub2.
IPR012256; D_lactate_DHase.
IPR016168; FAD-linked_Oxase_FAD-bd_sub2.
IPR015409; Lactate_DHase_C.
IPR006094; Oxid_FAD_bind_N.
Graphical view of domain structure.
Gene3D G3DSA:3.30.70.610; D-lactate_dehydrogenase_C-sub1; 1.
G3DSA:3.30.1370.20; D-lactate_dehydrogenase_C-sub2; 1.
G3DSA:3.30.465.20; FAD-linked_oxidase_FAD-bd_sub2; 1.
Pfam PF01565; FAD_binding_4; 1.
PF09330; Lact-deh-memb; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000101; D-lactate_dh; 1.
PROSITE PS51387; FAD_PCMH; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P06149.
ProtoNet P06149.
Genome annotation databases
GeneID 946653; -.
GenomeReviews U00096_GR; b2133.
AP009048_GR; JW2121.
KEGG ecj:JW2121; -.
eco:b2133; -.
Phylogenomic databases
HOGENOM P06149; -.
Other
DrugBank DB00756; Hexachlorophene.
Genome annotation databases
CMR P06149; b2133.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Cell membrane; Complete proteome; Direct protein sequencing; FAD; Flavoprotein; Membrane; NAD; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   571  570     D-lactate dehydrogenase. PRO_0000079928
DOMAIN   42   213  172     FAD-binding PCMH-type. 
HELIX   10    20  11      
HELIX   22    24  3      
HELIX   29    36  8      
STRAND   39    41  3      
STRAND   47    50  4      
HELIX   55    67  13      
STRAND   71    77  7      
STRAND   81    83  3      
STRAND   96   100  5      
STRAND   107   110  4      
TURN   111   114  4      
STRAND   115   118  4      
HELIX   124   131  8      
HELIX   132   134  3      
HELIX   143   147  5      
HELIX   151   156  6      
STRAND   174   179  6      
STRAND   185   189  5      
STRAND   191   193  3      
HELIX   199   207  9      
HELIX   213   215  3      
HELIX   228   233  6      
HELIX   247   249  3      
STRAND   259   268  10      
STRAND   277   284  8      
HELIX   286   299  14      
STRAND   305   311  7      
HELIX   312   318  7      
HELIX   379   387  9      
STRAND   389   396  8      
HELIX   400   414  15      
STRAND   418   421  4      
HELIX   424   434  11      
HELIX   437   447  11      
HELIX   449   451  3      
STRAND   452   461  10      
HELIX   475   478  4      
STRAND   481   489  9      
TURN   490   493  4      
STRAND   494   502  9      
HELIX   507   520  14      
STRAND   527   529  3      
TURN   532   534  3      
HELIX   539   548  10      
TURN   556   560  5      
Sequence information
Length: 571 AA [This is the length of the unprocessed precursor] Molecular weight: 64612 Da [This is the MW of the unprocessed precursor] CRC64: 77FB2C467CB4389F [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSSMTTTDNK AFLNELARLV GSSHLLTDPA KTARYRKGFR SGQGDALAVV FPGSLLELWR 

        70         80         90        100        110        120 
VLKACVTADK IILMQAANTG LTEGSTPNGN DYDRDVVIIS TLRLDKLHVL GKGEQVLAYP 

       130        140        150        160        170        180 
GTTLYSLEKA LKPLGREPHS VIGSSCIGAS VIGGICNNSG GSLVQRGPAY TEMSLFARIN 

       190        200        210        220        230        240 
EDGKLTLVNH LGIDLGETPE QILSKLDDDR IKDDDVRHDG RHAHDYDYVH RVRDIEADTP 

       250        260        270        280        290        300 
ARYNADPDRL FESSGCAGKL AVFAVRLDTF EAEKNQQVFY IGTNQPEVLT EIRRHILANF 

       310        320        330        340        350        360 
ENLPVAGEYM HRDIYDIAEK YGKDTFLMID KLGTDKMPFF FNLKGRTDAM LEKVKFFRPH 

       370        380        390        400        410        420 
FTDRAMQKFG HLFPSHLPPR MKNWRDKYEH HLLLKMAGDG VGEAKSWLVD YFKQAEGDFF 

       430        440        450        460        470        480 
VCTPEEGSKA FLHRFAAAGA AIRYQAVHSD EVEDILALDI ALRRNDTEWY EHLPPEIDSQ 

       490        500        510        520        530        540 
LVHKLYYGHF MCYVFHQDYI VKKGVDVHAL KEQMLELLQQ RGAQYPAEHN VGHLYKAPET 

       550        560        570 
LQKFYRENDP TNSMNPGIGK TSKRKNWQEV E 

P06149 in FASTA format

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