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UniProtKB/Swiss-Prot entry P04970


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name G3P1_CAEEL
Primary accession number P04970
Secondary accession numbers None
Integrated into Swiss-Prot on August 13, 1987
Sequence was last modified on August 13, 1987 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 79)
Name and origin of the protein
Protein name Glyceraldehyde-3-phosphate dehydrogenase 1
Synonyms GAPDH-1
EC 1.2.1.12
Gene name
Name: gpd-1
ORFNames: T09F3.3
From
Caenorhabditis elegans [TaxID: 6239] 
Taxonomy Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=Bristol N2;
DOI=10.1016/0022-2836(89)90490-7; PubMed=2716055 [NCBI, ExPASy, EBI, Israel, Japan]
Huang X.Y., Barrios L.A.M., Vonkhorporn P., Honda S., Albertson D.G., Hecht R.M.;
"Genomic organization of the glyceraldehyde-3-phosphate dehydrogenase gene family of Caenorhabditis elegans.";
J. Mol. Biol. 206:411-424(1989).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1016/0167-4781(87)90018-2; PubMed=3026481 [NCBI, ExPASy, EBI, Israel, Japan]
Yarbrough P.O., Hayden M.A., Dunn L.A., Vermersch P.S., Klass M.R., Hecht R.M.;
"The glyceraldehyde-3-phosphate dehydrogenase gene family in the nematode, Caenorhabditis elegans: isolation and characterization of one of the genes.";
Biochim. Biophys. Acta 908:21-33(1987).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Bristol N2;
DOI=10.1126/science.282.5396.2012; PubMed=9851916 [NCBI, ExPASy, EBI, Israel, Japan]
The C. elegans sequencing consortium;
"Genome sequence of the nematode C. elegans: a platform for investigating biology.";
Science 282:2012-2018(1998).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X52674; CAA36900.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X04818; CAA28504.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z49070; CAA88870.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S03911; DEKWG1.
RefSeq NP_496237.1; -.
UniGene Cel.6897
3D structure databases
HSSP P56649; 1CRW. [HSSP ENTRY / PDB]
ModBase P04970.
Protein-protein interaction databases
DIP DIP:24716N; -.
IntAct P04970; -.
Organism-specific databases
WormBase WBGene00001683; gpd-1.
WormPep T09F3.3; CE02343. [WormPep / WorfDB]
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
GO:0009792; Biological process: embryonic development ending in birth or egg hatching (inferred from mutant phenotype from WormBase).
GO:0008406; Biological process: gonad development (inferred from mutant phenotype from WormBase).
GO:0002119; Biological process: nematode larval development (inferred from mutant phenotype from WormBase).
GO:0040018; Biological process: positive regulation of multicellular organism growth (inferred from mutant phenotype from WormBase).
QuickGo view.
Family and domain databases
InterPro IPR000173; GlycerAld_3-P_DHase.
IPR006424; Glyceraldehyde-3-P_DHase_1.
Graphical view of domain structure.
PANTHER PTHR10836; GAP_DH; 1.
Pfam PF02800; Gp_dh_C; 1.
PF00044; Gp_dh_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000149; GAP_DH; 1.
PRINTS PR00078; G3PDHDRGNASE.
TIGRFAMs TIGR01534; GAPDH-I; 1.
PROSITE PS00071; GAPDH; 1.
BLOCKS P04970.
ProtoNet P04970.
Genome annotation databases
Ensembl T09F3.3; Caenorhabditis elegans. [Contig view]
GeneID 174603; -.
KEGG cel:T09F3.3; -.
Other
NextBio 884736; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Glycolysis; NAD; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   341  341     Glyceraldehyde-3-phosphate dehydrogenase 1. PRO_0000145510
NP_BIND   13    14  2     NAD (By similarity). 
REGION   157   159  3     Glyceraldehyde 3-phosphate binding (By similarity). 
REGION   217   218  2     Glyceraldehyde 3-phosphate binding (By similarity). 
ACT_SITE   158   158        Nucleophile (By similarity). 
BINDING   35    35        NAD (By similarity). 
BINDING   85    85        NAD; via carbonyl oxygen (By similarity). 
BINDING   188   188        Glyceraldehyde 3-phosphate (By similarity). 
BINDING   240   240        Glyceraldehyde 3-phosphate (By similarity). 
BINDING   322   322        NAD (By similarity). 
SITE   185   185  1     Activates thiol group during catalysis (By similarity). 
Sequence information
Length: 341 AA [This is the length of the unprocessed precursor] Molecular weight: 36382 Da [This is the MW of the unprocessed precursor] CRC64: 648E40ED4BD270CC [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSKANVGING FGRIGRLVLR AAVEKDTVQV VAVNDPFITI DYMVYLFKYD STHGQFKGTV 

        70         80         90        100        110        120 
TYDGDFLIVQ KDGKSSHKIK VFNSKDPAAI AWGSVKADFV VESTGVFTTK EKASAHLQGG 

       130        140        150        160        170        180 
AKKVIISAPS ADAPMYVVGV NHEKYDASND HVVSNASCTT NCLAPLAKVI NDNFGIIEGL 

       190        200        210        220        230        240 
MTTVHAVTAT QKTVDGPSGK LWRDGRGAGQ NIIPASTGAA KAVGKVIPEL NGKLTGMAFR 

       250        260        270        280        290        300 
VPTPDVSVVD LTVRLEKPAS MDDIKKVVKA AADGPMKGIL AYTEDQVVST DFVSDPHSSI 

       310        320        330        340 
FDAGACISLN PNFVKLVSWY DNEYGYSNRV VDLIGYIATR G 

P04970 in FASTA format

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