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UniProtKB/Swiss-Prot entry P04916


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name RET4_RAT
Primary accession number P04916
Secondary accession numbers None
Integrated into Swiss-Prot on August 13, 1987
Sequence was last modified on August 13, 1987 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 69)
Name and origin of the protein
Protein name Retinol-binding protein 4 [Precursor]
Synonyms Plasma retinol-binding protein
PRBP
RBP
Gene name
Name: Rbp4
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
PubMed=4044565 [NCBI, ExPASy, EBI, Israel, Japan]
Laurent B.C., Nilsson M.H.L., Bavik C.O., Jones T.A., Sundelin J., Peterson P.A.;
"Characterization of the rat retinol-binding protein gene and its comparison to the three-dimensional structure of the protein.";
J. Biol. Chem. 260:11476-11480(1985).
[2]
PROTEIN SEQUENCE OF 19-59, AND NUCLEOTIDE SEQUENCE OF 30-201.
PubMed=3838985 [NCBI, ExPASy, EBI, Israel, Japan]
Sundelin J., Laurent B.C., Anundi H., Traegaardh L., Larhammar D., Bjoerck L., Eriksson U., Aakerstroem B., Jones A., Newcomer M., Peterson P.A., Rask L.;
"Amino acid sequence homologies between rabbit, rat, and human serum retinol-binding proteins.";
J. Biol. Chem. 260:6472-6480(1985).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
K03046; AAA42018.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M10610; AAA42018.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M10934; AAA42020.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A92493; VART.
RefSeq NP_037294.1; -.
UniGene Rn.108214
3D structure databases
HSSP P02753; 1RBP. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
SMR P04916; 19-192.
ModBase P04916.
Organism-specific databases
RGD 3546; Rbp4.
Gene expression databases
ArrayExpress P04916; -.
GermOnline ENSRNOG00000015518; Rattus norvegicus.
Ontologies
GO
GO:0005576; Cellular component: extracellular region (inferred from electronic annotation from UniProtKB-KW).
GO:0016918; Molecular function: retinal binding (inferred from electronic annotation from UniProtKB-KW).
GO:0019841; Molecular function: retinol binding (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR012674; Calycin.
IPR002345; Lipocalin.
IPR000566; Lipocln_cytFABP.
IPR002449; Retinol_bd.
Graphical view of domain structure.
Gene3D G3DSA:2.40.128.20; Calycin; 1.
PANTHER PTHR11873; Retinol_bd; 1.
Pfam PF00061; Lipocalin; 1.
Pfam graphical view of domain structure.
PRINTS PR00179; LIPOCALIN.
PR01174; RETINOLBNDNG.
PROSITE PS00213; LIPOCALIN; 1.
BLOCKS P04916.
ProtoNet P04916.
Genome annotation databases
Ensembl ENSRNOG00000015518; Rattus norvegicus. [Contig view]
GeneID 25703; -.
KEGG rno:25703; -.
Phylogenomic databases
HOVERGEN P04916; -.
Other
NextBio 607739; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Direct protein sequencing; Retinol-binding; Secreted; Signal; Transport; Vitamin A.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    18  18      
CHAIN   19   201  183     Retinol-binding protein 4. PRO_0000017970
DISULFID   22   178        By similarity. 
DISULFID   88   192        By similarity. 
DISULFID   138   147        By similarity. 
Sequence information
Length: 201 AA [This is the length of the unprocessed precursor] Molecular weight: 23220 Da [This is the MW of the unprocessed precursor] CRC64: E6737E293B37A30A [This is a checksum on the sequence]
        10         20         30         40         50         60 
MEWVWALVLL AALGGGSAER DCRVSSFRVK ENFDKARFSG LWYAIAKKDP EGLFLQDNII 

        70         80         90        100        110        120 
AEFSVDEKGH MSATAKGRVR LLSNWEVCAD MVGTFTDTED PAKFKMKYWG VASFLQRGND 

       130        140        150        160        170        180 
DHWIIDTDYD TFALQYSCRL QNLDGTCADS YSFVFSRDPN GLTPETRRLV RQRQEELCLE 

       190        200 
RQYRWIEHNG YCQSRPSRNS L 

P04916 in FASTA format

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