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UniProtKB/Swiss-Prot entry P04288


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name GM_HHV11
Primary accession number P04288
Secondary accession numbers None
Integrated into Swiss-Prot on March 20, 1987
Sequence was last modified on March 20, 1987 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 53)
Name and origin of the protein
Protein name Glycoprotein M
Synonym gM
Gene name
Name: GM
ORFNames: UL10
From
Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) [TaxID: 10299] 
Taxonomy Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus.
Virus host Homo sapiens (Human) [TaxID: 9606]
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=2839594 [NCBI, ExPASy, EBI, Israel, Japan]
McGeoch D.J., Dalrymple M.A., Davison A.J., Dolan A., Frame M.C., McNab D., Perry L.J., Scott J.E., Taylor P.;
"The complete DNA sequence of the long unique region in the genome of herpes simplex virus type 1.";
J. Gen. Virol. 69:1531-1574(1988).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1093/nar/14.8.3435; PubMed=3010237 [NCBI, ExPASy, EBI, Israel, Japan]
McGeoch D.J., Dolan A., Frame M.C.;
"DNA sequence of the region in the genome of herpes simplex virus type 1 containing the exonuclease gene and neighbouring genes.";
Nucleic Acids Res. 14:3435-3448(1986).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-98.
PubMed=2826807 [NCBI, ExPASy, EBI, Israel, Japan]
McGeoch D.J., Dalrymple M.A., Dolan A., McNab D., Perry L.J., Taylor P., Challberg M.D.;
"Structures of herpes simplex virus type 1 genes required for replication of virus DNA.";
J. Virol. 62:444-453(1988).
[4]
SUBCELLULAR LOCATION.
STRAIN=F;
DOI=10.1128/JVI.01756-06; PubMed=17079321 [NCBI, ExPASy, EBI, Israel, Japan]
Baines J.D., Wills E., Jacob R.J., Pennington J., Roizman B.;
"Glycoprotein M of herpes simplex virus 1 is incorporated into virions during budding at the inner nuclear membrane.";
J. Virol. 81:800-812(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X14112; CAA32346.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X03839; CAA27451.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M19120; AAA45821.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A03736; WMBE51.
RefSeq NP_044611.1; -.
3D structure databases
ModBase P04288.
Ontologies
GO
GO:0030659; Cellular component: cytoplasmic vesicle membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005637; Cellular component: nuclear inner membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0019031; Cellular component: viral envelope (inferred from electronic annotation from UniProtKB-KW).
GO:0055036; Cellular component: virion membrane (inferred from electronic annotation from UniProtKB-SubCell).
QuickGo view.
Family and domain databases
InterPro IPR000785; Herpes_glycop.
Graphical view of domain structure.
Pfam PF01528; Herpes_glycop; 1.
Pfam graphical view of domain structure.
PRINTS PR00333; HSVINTEGRLMP.
BLOCKS P04288.
ProtoNet P04288.
Genome annotation databases
GeneID 2703379; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasmic vesicle; Envelope protein; Glycoprotein; Membrane; Nucleus; Transmembrane; Virion.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   473  473     Glycoprotein M. PRO_0000115775
TRANSMEM   33    53  21     Potential. 
TRANSMEM   91   111  21     Potential. 
TRANSMEM   138   158  21     Potential. 
TRANSMEM   164   184  21     Potential. 
TRANSMEM   217   237  21     Potential. 
TRANSMEM   251   271  21     Potential. 
TRANSMEM   281   301  21     Potential. 
TRANSMEM   319   339  21     Potential. 
TOPO_DOM   340   473  134     Cytoplasmic (Potential). 
CARBOHYD   71    71        N-linked (GlcNAc...) (Potential). 
CARBOHYD   246   246        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 473 AA [This is the length of the unprocessed precursor] Molecular weight: 51393 Da [This is the MW of the unprocessed precursor] CRC64: E08FD792409A81E6 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGRPAPRGSP DSAPPTKGMT GARTAWWVWC VQVATFVVSA VCVTGLLVLA SVFRARFPCF 

        70         80         90        100        110        120 
YATASSYAGV NSTAEVRGGV AVPLRLDTQS LVGTYVITAV LLLAVAVYAV VGAVTSRYDR 

       130        140        150        160        170        180 
ALDAGRRLAA ARMAMPHATL IAGNVCSWLL QITVLLLAHR ISQLAHLVYV LHFACLVYFA 

       190        200        210        220        230        240 
AHFCTRGVLS GTYLRQVHGL MELAPTHHRV VGPARAVLTN ALLLGVFLCT ADAAVSLNTI 

       250        260        270        280        290        300 
AAFNFNFSAP GMLICLTVLF AILVVSLLLV VEGVLCHYVR VLVGPHLGAV AATGIVGLAC 

       310        320        330        340        350        360 
EHYYTNGYYV VETQWPGAQT GVRVALALVA AFALGMAVLR CTRAYLYHRR HHTKFFMRMR 

       370        380        390        400        410        420 
DTRHRAHSAL KRVRSSMRGS RDGRHRPAPG SPPGIPEYAE DPYAISYGGQ LDRYGDSDGE 

       430        440        450        460        470 
PIYDEVADDQ TDVLYAKIQH PRHLPDDDPI YDTVGGYDPE PAEDPVYSTV RRW 

P04288 in FASTA format

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View entry in raw text format (no links)
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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