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UniProtKB/Swiss-Prot entry P04066


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name FUCO_HUMAN
Primary accession number P04066
Secondary accession numbers Q14334 Q14335 Q3LID0 Q8NAC2
Integrated into Swiss-Prot on November 1, 1986
Sequence was last modified on July 24, 2007 (Sequence version 4)
Annotations were last modified on    November 4, 2008 (Entry version 98)
Name and origin of the protein
Protein name Tissue alpha-L-fucosidase [Precursor]
Synonyms EC 3.2.1.51
Alpha-L-fucoside fucohydrolase
Alpha-L-fucosidase I
Gene name
Name: FUCA1
ORFNames: Nbla10230
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANT FUCOSIDOSIS ASP-65, AND VARIANT ARG-286.
DOI=10.1093/hmg/2.4.423; PubMed=8504303 [NCBI, ExPASy, EBI, Israel, Japan]
Seo H.-C., Willems P.J., Kretz K.A., Martin B.M., O'Brien J.S.;
"Fucosidosis: four new mutations and a new polymorphism.";
Hum. Mol. Genet. 2:423-429(1993).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Neuroblastoma;
DOI=10.1016/S0304-3835(03)00085-5; PubMed=12880961 [NCBI, ExPASy, EBI, Israel, Japan]
Ohira M., Morohashi A., Nakamura Y., Isogai E., Furuya K., Hamano S., Machida T., Aoyama M., Fukumura M., Miyazaki K., Suzuki Y., Sugano S., Hirato J., Nakagawara A.;
"Neuroblastoma oligo-capping cDNA project: toward the understanding of the genesis and biology of neuroblastoma.";
Cancer Lett. 197:63-68(2003).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Spleen;
DOI=10.1038/ng1285; PubMed=14702039 [NCBI, ExPASy, EBI, Israel, Japan]
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human cDNAs.";
Nat. Genet. 36:40-45(2004).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/nature04727; PubMed=16710414 [NCBI, ExPASy, EBI, Israel, Japan]
Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K., Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.;
"The DNA sequence and biological annotation of human chromosome 1.";
Nature 441:315-321(2006).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Skin;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
NUCLEOTIDE SEQUENCE [MRNA] OF 2-466, AND VARIANT SER-269.
DOI=10.1016/0006-291X(89)91739-7; PubMed=2803312 [NCBI, ExPASy, EBI, Israel, Japan]
Occhiodoro T., Beckmann K.R., Morris C.P., Hopwood J.J.;
"Human alpha-L-fucosidase: complete coding sequence from cDNA clones.";
Biochem. Biophys. Res. Commun. 164:439-445(1989).
[7]
NUCLEOTIDE SEQUENCE [MRNA] OF 3-92.
TISSUE=Placenta;
DOI=10.1007/BF01799583; PubMed=2174090 [NCBI, ExPASy, EBI, Israel, Japan]
Fukushima H., Nishimoto J., Okada S.;
"Sequencing and expression of a full-length cDNA for human alpha-L-fucosidase.";
J. Inherit. Metab. Dis. 13:761-765(1990).
[8]
NUCLEOTIDE SEQUENCE [MRNA] OF 75-427.
PubMed=2983333 [NCBI, ExPASy, EBI, Israel, Japan]
Fukushima H., de Wet J.R., O'Brien J.S.;
"Molecular cloning of a cDNA for human alpha-L-fucosidase.";
Proc. Natl. Acad. Sci. U.S.A. 82:1262-1265(1985).
[9]
NUCLEOTIDE SEQUENCE [MRNA] OF 75-426.
PubMed=6096099 [NCBI, ExPASy, EBI, Israel, Japan]
de Wet J.R., Fukushima H., Dewji N.N., Wilcox E., O'Brien J.S., Helinski D.R.;
"Chromogenic immunodetection of human serum albumin and alpha-L-fucosidase clones in a human hepatoma cDNA expression library.";
DNA 3:437-447(1984).
[10]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 75-426, AND VARIANT SER-269.
PubMed=2894306 [NCBI, ExPASy, EBI, Israel, Japan]
O'Brien J.S., Willems P.J., Fukushima H., de Wet J.R., Darby J.K., Dicioccio R.A., Fowler M.L., Shows T.B.;
"Molecular biology of the alpha-6L-fucosidase gene and fucosidosis.";
Enzyme 38:45-53(1987).
[11]
STRUCTURE OF CARBOHYDRATES.
Beem E.P., Lisman J.J.W., van Steijn G.J., van der Wal C.J., Trippelvitz L.A.W., Overdijk B., van Halbeek H., Mutsaers J.H.G.M., Vliegenthart J.F.G.;
"Structural analysis of the carbohydrate moieties of alpha-L-fucosidase from human liver.";
Glycoconj. J. 4:33-42(1987).
[12]
REVIEW ON VARIANTS.
DOI=10.1038/sj.ejhg.5200272; PubMed=10094192 [NCBI, ExPASy, EBI, Israel, Japan]
Willems P.J., Seo H.-C., Coucke P., Tonlorenzi R., O'Brien J.S.;
"Spectrum of mutations in fucosidosis.";
Eur. J. Hum. Genet. 7:60-67(1999).
[13]
VARIANT ARG-286.
DOI=10.1016/0925-4439(93)90065-9; PubMed=8399358 [NCBI, ExPASy, EBI, Israel, Japan]
Yang M., Allen H., Dicioccio R.A.;
"Pedigree analysis of alpha-L-fucosidase gene mutations in a fucosidosis family.";
Biochim. Biophys. Acta 1182:245-249(1993).
[14]
VARIANT FUCOSIDOSIS LEU-68.
PubMed=7874128 [NCBI, ExPASy, EBI, Israel, Japan]
Seo H.-C., Yang M., Tonlorenzi R., Willems P.J., Kim A.H., Filocamo M., Gatti R., Dicioccio R.A., O'Brien J.S.;
"A missense mutation (S63L) in alpha-L-fucosidase is responsible for fucosidosis in an Italian patient.";
Hum. Mol. Genet. 3:2065-2066(1994).
[15]
VARIANT ARG-286.
PubMed=7815431 [NCBI, ExPASy, EBI, Israel, Japan]
Cragg H., Winchester B., Seo H.-C., O'Brien J.S., Swallow D.;
"Molecular basis of the common electrophoretic polymorphism (Fu1/Fu2) in human alpha-L-fucosidase.";
J. Med. Genet. 31:659-660(1994).
[16]
VARIANT FUCOSIDOSIS ARG-410.
DOI=10.1023/A:1005405222252; PubMed=9762612 [NCBI, ExPASy, EBI, Israel, Japan]
Fleming C.J., Sinclair D.U., White E.J., Winchester B., Whiteford M.L., Connor J.M.;
"A fucosidosis patient with relative longevity and a missense mutation in exon 7 of the alpha-fucosidase gene.";
J. Inherit. Metab. Dis. 21:688-689(1998).
[17]
VARIANTS SER-269 AND ARG-286.
DOI=10.1023/A:1020116220624; PubMed=12408193 [NCBI, ExPASy, EBI, Israel, Japan]
Ip P., Goh W., Chan K.W., Cheung P.T.;
"A novel FUCA1 mutation causing fucosidosis in a Chinese boy.";
J. Inherit. Metab. Dis. 25:415-416(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M80815; AAA52481.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M80809; AAA52481.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M80810; AAA52481.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M80811; AAA52481.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M80812; AAA52481.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M80813; AAA52481.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M80814; AAA52481.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB074175; BAE45738.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK092914; BAC04002.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL590728; CAH74004.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC017338; AAH17338.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M29877; AAA35519.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M10355; AAA52482.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X01390; CAA25646.1; ALT_SEQ; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A33427; HWHUFA.
RefSeq NP_000138.2; -.
UniGene Hs.370858
3D structure databases
ModBase P04066.
Organism-specific databases
H-InvDB HIX0020062; -.
HGNC HGNC:4006; FUCA1.
GenAtlas FUCA1.
MIM 230000; gene+phenotype. [NCBI / EBI]
Orphanet 349; Fucosidosis.
PharmGKB PA28422; -.
GeneCards P04066.
Gene expression databases
ArrayExpress P04066; -.
CleanEx HS_FUCA1; -.
GermOnline ENSG00000179163; Homo sapiens.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred by curator from UniProtKB).
GO:0004560; Molecular function: alpha-L-fucosidase activity (traceable author statement from UniProtKB).
GO:0006027; Biological process: glycosaminoglycan catabolic process (non-traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR016286; Alpha-L-fucosidase.
IPR000933; Glyco_hydro_29.
Graphical view of domain structure.
PANTHER PTHR10030; Glyco_hydro_29; 1.
Pfam PF01120; Alpha_L_fucos; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001092; Alpha-L-fucosidase; 1.
PRINTS PR00741; GLHYDRLASE29.
PROSITE PS00385; ALPHA_L_FUCOSIDASE; 1.
BLOCKS P04066.
ProtoNet P04066.
Genome annotation databases
Ensembl ENSG00000179163; Homo sapiens. [Contig view]
GeneID 2517; -.
KEGG hsa:2517; -.
Phylogenomic databases
HOVERGEN P04066; -.
Other
LinkHub P04066; -.
NextBio 9913; -.
SOURCE FUCA1; Homo sapiens.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Disease mutation; Glycoprotein; Glycosidase; Hydrolase; Lysosome; Polymorphism; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    31  31     Potential. 
CHAIN   32   466  435     Tissue alpha-L-fucosidase. PRO_0000010308
SITE   296   296  1     May be important for catalysis. 
CARBOHYD   241   241        N-linked (GlcNAc...) (Potential). 
CARBOHYD   268   268        N-linked (GlcNAc...) (Potential). 
CARBOHYD   382   382        N-linked (GlcNAc...) (Potential). 
VARIANT   10    10  1     P -> R (in dbSNP:rs2070956 [NCBI]). VAR_016233 
VARIANT   65    65  1     G -> D (in fucosidosis; loss of activity). VAR_002442 
VARIANT   68    68  1     S -> L (in fucosidosis). VAR_002443 
VARIANT   269   269  1     C -> S (in dbSNP:rs1126512 [NCBI]). VAR_016234 
VARIANT   286   286  1     Q -> R (in allele FUCA1*2; dbSNP:rs13551 [NCBI]). VAR_002444 
VARIANT   410   410  1     L -> R (in fucosidosis; less than 1% of residual activity). VAR_016235 
CONFLICT   54    56        DEA -> NEV (in Ref. 3; BAC04002). 
CONFLICT   74    74        S -> T (in Ref. 7). 
CONFLICT   76    77        WF -> FL (in Ref. 8; AAA52482 and 9; CAA25646). 
CONFLICT   93   114        Missing (in Ref. 3; BAC04002). 
CONFLICT   127   127        A -> T (in Ref. 3; BAC04002). 
CONFLICT   171   171        A -> G (in Ref. 3; BAC04002). 
CONFLICT   244   244        N -> D (in Ref. 3; BAC04002). 
CONFLICT   427   427        Q -> P (in Ref. 8; AAA52482). 
Sequence information
Length: 466 AA [This is the length of the unprocessed precursor] Molecular weight: 53689 Da [This is the MW of the unprocessed precursor] CRC64: D9A38ECC7BADCBBB [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRAPGMRSRP AGPALLLLLL FLGAAESVRR AQPPRRYTPD WPSLDSRPLP AWFDEAKFGV 

        70         80         90        100        110        120 
FIHWGVFSVP AWGSEWFWWH WQGEGRPQYQ RFMRDNYPPG FSYADFGPQF TARFFHPEEW 

       130        140        150        160        170        180 
ADLFQAAGAK YVVLTTKHHE GFTNWPSPVS WNWNSKDVGP HRDLVGELGT ALRKRNIRYG 

       190        200        210        220        230        240 
LYHSLLEWFH PLYLLDKKNG FKTQHFVSAK TMPELYDLVN SYKPDLIWSD GEWECPDTYW 

       250        260        270        280        290        300 
NSTNFLSWLY NDSPVKDEVV VNDRWGQNCS CHHGGYYNCE DKFKPQSLPD HKWEMCTSID 

       310        320        330        340        350        360 
KFSWGYRRDM ALSDVTEESE IISELVQTVS LGGNYLLNIG PTKDGLIVPI FQERLLAVGK 

       370        380        390        400        410        420 
WLSINGEAIY ASKPWRVQWE KNTTSVWYTS KGSAVYAIFL HWPENGVLNL ESPITTSTTK 

       430        440        450        460 
ITMLGIQGDL KWSTDPDKGL FISLPQLPPS AVPAEFAWTI KLTGVK 

P04066 in FASTA format

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