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UniProtKB/Swiss-Prot entry P03480


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NRAM_I49A1
Primary accession number P03480
Secondary accession numbers Q0A445 Q6LEJ3
Integrated into Swiss-Prot on July 21, 1986
Sequence was last modified on March 6, 2007 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 68)
Name and origin of the protein
Protein name Neuraminidase
Synonym EC 3.2.1.18
Gene name
Name: NA
From
Influenza A virus (strain A/Duck/Germany/1949 H10N7) [TaxID: 382838] 
Taxonomy Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A.
Virus host Aves [TaxID: 8782]
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC RNA].
DOI=10.1126/science.1121586; PubMed=16439620 [NCBI, ExPASy, EBI, Israel, Japan]
Obenauer J.C., Denson J., Mehta P.K., Su X., Mukatira S., Finkelstein D.B., Xu X., Wang J., Ma J., Fan Y., Rakestraw K.M., Webster R.G., Hoffmann E., Krauss S., Zheng J., Zhang Z., Naeve C.W.;
"Large-scale sequence analysis of avian influenza isolates.";
Science 311:1576-1580(2006).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC RNA] OF 1-96.
DOI=10.1021/bi00260a015; PubMed=6896994 [NCBI, ExPASy, EBI, Israel, Japan]
Blok J., Air G.M.;
"Variation in the membrane-insertion and 'stalk' sequences in eight subtypes of influenza type A virus neuraminidase.";
Biochemistry 21:4001-4007(1982).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC RNA] OF 1-96.
Blok J.;
"Sequence variation at the 3' end of the neuraminidase gene from 39 influenza type A viruses.";
(In) Nayak D., Fox C.F. (eds.); Genetic variation among influenza viruses, pp.45-54, University of California, Los Angeles (1982).
[4]
REVIEW.
DOI=10.1016/j.virusres.2004.08.012; PubMed=15567494 [NCBI, ExPASy, EBI, Israel, Japan]
Nayak D.P., Hui E.K., Barman S.;
"Assembly and budding of influenza virus.";
Virus Res. 106:147-165(2004).
[5]
REVIEW.
DOI=10.1056/NEJMra050740; PubMed=16192481 [NCBI, ExPASy, EBI, Israel, Japan]
Moscona A.;
"Neuraminidase inhibitors for influenza.";
N. Engl. J. Med. 353:1363-1373(2005).
[6]
REVIEW.
DOI=10.1248/bpb.28.399; PubMed=15744059 [NCBI, ExPASy, EBI, Israel, Japan]
Suzuki Y.;
"Sialobiology of influenza: molecular mechanism of host range variation of influenza viruses.";
Biol. Pharm. Bull. 28:399-408(2005).
Comments
  • FUNCTION: Catalyzes the removal of terminal sialic acid residues from viral and cellular glycoconjugates. Cleaves off the terminal sialic acids on the glycosylated HA during virus budding to facilitate virus release. Additionally helps virus spread through the circulation by further removing sialic acids from the cell surface. These cleavages prevent self-aggregation and ensure the efficient spread of the progeny virus from cell to cell. Otherwise, infection would be limited to one round of replication. Described as a receptor-destroying enzyme because it cleaves a terminal sialic acid from the cellular receptors. May facilitate viral invasion of the upper airways by cleaving the sialic acid moities on the mucin of the airway epithelial cells. Likely to plays a role in the budding process through its association with lipid rafts during intracellular transport. May additionally display a raft-association independent effect on budding. Plays a role in the determination of host range restriction on replication and virulence. Sialidase activity in late endosome/lysosome traffic seems to enhance virus replication.
  • CATALYTIC ACTIVITY: Hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
  • COFACTOR: Binds 1 calcium ion (By similarity).
  • ENZYME REGULATION: Inhibited by the neuraminidase inhibitors zanamivir (Relenza) and oseltamivir (Tamiflu). These drugs interfere with the release of progeny virus from infected cells and are effective against all influenza strains. Resistance to neuraminidase inhibitors is quite rare.
  • SUBUNIT: Homotetramer (By similarity).
  • SUBCELLULAR LOCATION: Virion membrane (By similarity). Apical cell membrane; Single-pass type II membrane protein (By similarity). Note=Preferentially accumulates at the apical plasma membrane in infected polarized epithelial cells, which is the virus assembly site. Uses lipid rafts for cell surface transport and apical sorting. In the virion, forms a mushroom-shaped spike on the surface of the membrane (By similarity).
  • DOMAIN: Intact N-terminus is essential for virion morphogenesis. Possess two apical sorting signals, one in the ectodomain, which is likely to be a glycan, and the other in the transmembrane domain. The transmembrane domain also plays a role in lipid raft association (By similarity).
  • PTM: N-glycosylated (By similarity).
  • MISCELLANEOUS: The influenza A genome consist of 8 RNA segments. Genetic variation of hemagglutinin and/or neuraminidase genes results in the emergence of new influenza strains. The mechanism of variation can be the result of point mutations or the result of genetic reassortment between segments of two different strains.
  • SIMILARITY: Belongs to the glycosyl hydrolase 34 family [view classification].
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CY014673; ABI84537.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
J02099; AAA43391.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
K01022; AAA43357.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
ModBase P03480.
Ontologies
GO
GO:0016324; Cellular component: apical plasma membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0055036; Cellular component: virion membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0004308; Molecular function: exo-alpha-sialidase activity (inferred from electronic annotation from EC).
GO:0008152; Biological process: metabolic process (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
BLOCKS P03480.
ProtoNet P03480.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Cell membrane; Glycoprotein; Glycosidase; Hydrolase; Membrane; Metal-binding; Signal-anchor; Transmembrane; Virion.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   471  471     Neuraminidase. PRO_0000078685
TOPO_DOM   1     6  6     Cytoplasmic (Potential). 
TRANSMEM   7    27  21     Signal-anchor for type II membrane protein (Potential). 
TOPO_DOM   28   471  444     Extracellular (Potential). 
REGION   11    33  23     Involved in apical transport and lipid raft association (By similarity). 
REGION   36    89  54     Hypervariable stalk region (By similarity). 
REGION   90   471  382     Head of neuraminidase (By similarity). 
ACT_SITE   150   150        Potential. 
ACT_SITE   276   276        Potential. 
ACT_SITE   405   405        Potential. 
METAL   293   293        Calcium; via carbonyl oxygen (By similarity). 
METAL   297   297        Calcium; via carbonyl oxygen (By similarity). 
METAL   324   324        Calcium (By similarity). 
BINDING   117   117        Substrate (Potential). 
BINDING   292   292        Substrate (Potential). 
BINDING   371   371        Substrate (Potential). 
CARBOHYD   32    32        N-linked (GlcNAc...) (Potential). 
CARBOHYD   47    47        N-linked (GlcNAc...) (Potential). 
CARBOHYD   56    56        N-linked (GlcNAc...) (Potential). 
CARBOHYD   57    57        N-linked (GlcNAc...) (Potential). 
CARBOHYD   67    67        N-linked (GlcNAc...) (Potential). 
CARBOHYD   68    68        N-linked (GlcNAc...) (Potential). 
CARBOHYD   87    87        N-linked (GlcNAc...) (Potential). 
CARBOHYD   145   145        N-linked (GlcNAc...) (Potential). 
CARBOHYD   200   200        N-linked (GlcNAc...) (Potential). 
CARBOHYD   234   234        N-linked (GlcNAc...) (Potential). 
CARBOHYD   401   401        N-linked (GlcNAc...) (Potential). 
DISULFID   91   419        By similarity. 
DISULFID   123   128        By similarity. 
DISULFID   183   230        By similarity. 
DISULFID   232   237        By similarity. 
DISULFID   278   291        By similarity. 
DISULFID   280   289        By similarity. 
DISULFID   423   450        By similarity. 
CONFLICT   88    88        K -> H (in Ref. 2; AAA43391 and 3; AAA43357). 
Sequence information
Length: 471 AA [This is the length of the unprocessed precursor] Molecular weight: 51800 Da [This is the MW of the unprocessed precursor] CRC64: 68F6BBACFCDD21A1 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNPNQKLFAL SGVAIALSVM NLLIGISNVG LNVSLHLKEK GTKQEENLTC TTITQNNTTV 

        70         80         90        100        110        120 
VENTYVNNTT IITKEPDLKA PSYLLLNKSL CSVEGWVVIA KDNAIRFGES EQIIVTREPY 

       130        140        150        160        170        180 
VSCDPSGCKM YALHQGTTIR NKHSNGTIHD RTAFRGLIST PLGTPPTVSN SDFICVGWSS 

       190        200        210        220        230        240 
TSCHDGVGRM TICIQGNNDN ATATVYYNRR LTTTIKPWAR NILRTQESEC VCHNGTCAVV 

       250        260        270        280        290        300 
MTDGSASSQA YTKVMYFHKG LVIKEEPLKG SAKHIEECSC YGHNQKITCV CRDNWQGANR 

       310        320        330        340        350        360 
PIIEIDMNTL EHTSRYVCTG ILTDTSRPGD KPSGDCSNPI TGSPSAPGVK GFGFLNGDNT 

       370        380        390        400        410        420 
WLGRTISPRS RSGFEMLKIP NAGTDPNSRI AERQEIVDNN NWSGYSGSFI DYWDDDNECY 

       430        440        450        460        470 
NPCFYVELIR GRPEEAKYVW WTSNSLIALC GSPFPVGSGS FPDGAQIQYF S 

P03480 in FASTA format

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