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UniProtKB/Swiss-Prot entry P03470


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NRAM_I33A0
Primary accession number P03470
Secondary accession numbers Q67215 Q67216 Q67217
Integrated into Swiss-Prot on July 21, 1986
Sequence was last modified on December 20, 2005 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 77)
Name and origin of the protein
Protein name Neuraminidase
Synonym EC 3.2.1.18
Gene name
Name: NA
From
Influenza A virus (strain A/Wilson-Smith/1933 H1N1) (Influenza A virus (strain A/WS/1933 H1N1)) [TaxID: 381518] 
Taxonomy Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A.
Virus hosts Aves [TaxID: 8782]
Homo sapiens (Human) [TaxID: 9606]
Sus scrofa (Pig) [TaxID: 9823]
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC RNA].
STRAIN=A/WSN/33;
PubMed=7077751 [NCBI, ExPASy, EBI, Israel, Japan]
Hiti A.L., Nayak D.P.;
"Complete nucleotide sequence of the neuraminidase gene of human influenza virus A/WSN/33.";
J. Virol. 41:730-734(1982).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=A/NWS/33, A/WS/33, and A/WSN/33;
DOI=10.1007/BF01701815; PubMed=8560787 [NCBI, ExPASy, EBI, Israel, Japan]
Ward A.C.;
"Changes in the neuraminidase of neurovirulent influenza virus strains.";
Virus Genes 10:253-260(1995).
[3]
SUBCELLULAR LOCATION.
DOI=10.1128/JVI.74.14.6538-6545.2000; PubMed=10864667 [NCBI, ExPASy, EBI, Israel, Japan]
Barman S., Nayak D.P.;
"Analysis of the transmembrane domain of influenza virus neuraminidase, a type II transmembrane glycoprotein, for apical sorting and raft association.";
J. Virol. 74:6538-6545(2000).
[4]
FUNCTION.
STRAIN=A/WSN/33;
DOI=10.1128/JVI.79.18.11705-11715.2005; PubMed=16140748 [NCBI, ExPASy, EBI, Israel, Japan]
Suzuki T., Takahashi T., Guo C.T., Hidari K.I., Miyamoto D., Goto H., Kawaoka Y., Suzuki Y.;
"Sialidase activity of influenza A virus in an endocytic pathway enhances viral replication.";
J. Virol. 79:11705-11715(2005).
[5]
REVIEW.
DOI=10.1016/j.virusres.2004.08.012; PubMed=15567494 [NCBI, ExPASy, EBI, Israel, Japan]
Nayak D.P., Hui E.K., Barman S.;
"Assembly and budding of influenza virus.";
Virus Res. 106:147-165(2004).
[6]
REVIEW.
DOI=10.1056/NEJMra050740; PubMed=16192481 [NCBI, ExPASy, EBI, Israel, Japan]
Moscona A.;
"Neuraminidase inhibitors for influenza.";
N. Engl. J. Med. 353:1363-1373(2005).
[7]
REVIEW.
DOI=10.1248/bpb.28.399; PubMed=15744059 [NCBI, ExPASy, EBI, Israel, Japan]
Suzuki Y.;
"Sialobiology of influenza: molecular mechanism of host range variation of influenza viruses.";
Biol. Pharm. Bull. 28:399-408(2005).
Comments
  • FUNCTION: Catalyzes the removal of terminal sialic acid residues from viral and cellular glycoconjugates. Cleaves off the terminal sialic acids on the glycosylated HA during virus budding to facilitate virus release. Additionally helps virus spread through the circulation by further removing sialic acids from the cell surface. These cleavages prevent self-aggregation and ensure the efficient spread of the progeny virus from cell to cell. Otherwise, infection would be limited to one round of replication. Described as a receptor-destroying enzyme because it cleaves a terminal sialic acid from the cellular receptors. May facilitate viral invasion of the upper airways by cleaving the sialic acid moities on the mucin of the airway epithelial cells. Likely to plays a role in the budding process through its association with lipid rafts during intracellular transport. May additionally display a raft-association independent effect on budding. Plays a role in the determination of host range restriction on replication and virulence. Sialidase activity in late endosome/lysosome traffic seems to enhance virus replication.
  • FUNCTION: Unlike other strains, A/WSN/33 neuraminidase binds and activates plasminogen into plasmin in the vicinity of HA so that activated plasmin cleaves HA rendering the virus infectious.
  • CATALYTIC ACTIVITY: Hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
  • COFACTOR: Binds 1 calcium ion (By similarity).
  • ENZYME REGULATION: Inhibited by the neuraminidase inhibitors zanamivir (Relenza) and oseltamivir (Tamiflu). These drugs interfere with the release of progeny virus from infected cells and are effective against all influenza strains. Resistance to neuraminidase inhibitors is quite rare.
  • SUBUNIT: Homotetramer.
  • SUBCELLULAR LOCATION: Virion membrane. Apical cell membrane; Single-pass type II membrane protein. Note=Preferentially accumulates at the apical plasma membrane in infected polarized epithelial cells, which is the virus assembly site. Uses lipid rafts for cell surface transport and apical sorting. In the virion, forms a mushroom-shaped spike on the surface of the membrane.
  • DOMAIN: Intact N-terminus is essential for virion morphogenesis. Possess two apical sorting signals, one in the ectodomain, which is likely to be a glycan, and the other in the transmembrane domain. The transmembrane domain also plays a role in lipid raft association.
  • PTM: N-glycosylated (By similarity).
  • MISCELLANEOUS: The influenza A genome consist of 8 RNA segments. Genetic variation of hemagglutinin and/or neuraminidase genes results in the emergence of new influenza strains. The mechanism of variation can be the result of point mutations or the result of genetic reassortment between segments of two different strains.
  • SIMILARITY: Belongs to the glycosyl hydrolase 34 family [view classification].
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
J02177; AAA43397.1; ALT_SEQ; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L25815; AAA91326.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L25816; AAA91327.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L25817; AAA91328.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
HSSP P03472; 1MWE. [HSSP ENTRY / PDB]
SMR P03470; 67-451.
ModBase P03470.
Ontologies
GO
GO:0016324; Cellular component: apical plasma membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0055036; Cellular component: virion membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001860; Glyco_hydro_34.
Graphical view of domain structure.
Pfam PF00064; Neur; 1.
Pfam graphical view of domain structure.
ProDom PD000431; Glyco_hydro_34; 1.
[Domain structure / List of seq. sharing at least 1 domain]
BLOCKS P03470.
ProtoNet P03470.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Cell membrane; Complete proteome; Glycoprotein; Glycosidase; Hydrolase; Membrane; Metal-binding; Signal-anchor; Transmembrane; Virion.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   453  453     Neuraminidase. PRO_0000078726
TOPO_DOM   1     6  6     Cytoplasmic (Potential). 
TRANSMEM   7    35  29     Signal-anchor for type II membrane protein (Potential). 
TOPO_DOM   36   453  418     Extracellular (Potential). 
REGION   11    33  23     Involved in apical transport and lipid raft association. 
REGION   36    74  39     Hypervariable stalk region. 
REGION   75   453  379     Head of neuraminidase. 
ACT_SITE   135   135        Potential. 
ACT_SITE   261   261        Potential. 
ACT_SITE   386   386        Potential. 
METAL   278   278        Calcium; via carbonyl oxygen (By similarity). 
METAL   282   282        Calcium; via carbonyl oxygen (By similarity). 
METAL   308   308        Calcium (By similarity). 
METAL   328   328        Calcium; via carbonyl oxygen (By similarity). 
BINDING   102   102        Substrate (Potential). 
BINDING   277   277        Substrate (Potential). 
BINDING   352   352        Substrate (Potential). 
CARBOHYD   44    44        N-linked (GlcNAc...) (Potential). 
CARBOHYD   72    72        N-linked (GlcNAc...) (Potential). 
CARBOHYD   130   130        N-linked (GlcNAc...) (Potential). 
CARBOHYD   219   219        N-linked (GlcNAc...) (Potential). 
DISULFID   76   401        By similarity. 
DISULFID   108   113        By similarity. 
DISULFID   168   215        By similarity. 
DISULFID   217   222        By similarity. 
DISULFID   263   276        By similarity. 
DISULFID   265   274        By similarity. 
DISULFID   302   319        By similarity. 
DISULFID   405   430        By similarity. 
VARIANT   53    53  1     I -> S (in strain: A/WSN/33). 
VARIANT   56    57  2     YN -> HK (in strain: A/NWS/33). 
VARIANT   57    57  1     N -> K (in strain: A/WSN/33). 
VARIANT   130   130  1     N -> R (in strain: A/WSN/33). 
VARIANT   130   130  1     N -> Y (in strain: A/NWS/33). 
VARIANT   133   133  1     V -> F (in strain: A/WSN/33). 
VARIANT   133   133  1     V -> S (in strain: A/NWS/33). 
VARIANT   184   184  1     N -> D (in strain: A/WSN/33). 
VARIANT   206   206  1     K -> N (in strain: A/WSN/33). 
VARIANT   232   232  1     N -> D (in strain: A/WSN/33 and A/NWS/33). 
VARIANT   297   297  1     Q -> K (in strain: A/WSN/33). 
VARIANT   316   316  1     P -> T (in strain: A/WSN/33 and A/NWS/33). 
VARIANT   336   336  1     R -> K (in strain: A/WSN/33). 
VARIANT   373   373  1     V -> M (in strain: A/WSN/33). 
VARIANT   414   414  1     R -> L (in strain: A/WSN/33). 
VARIANT   414   414  1     R -> Q (in strain: A/NWS/33). 
VARIANT   418   419  2     ET -> DA (in strain: A/WSN/33). 
VARIANT   434   434  1     S -> G (in strain: A/WSN/33). 
CONFLICT   172   172        M -> V (in Ref. 1; AAA43397). 
CONFLICT   380   382        MTD -> ITN (in Ref. 1; AAA43397). 
Sequence information
Length: 453 AA [This is the length of the unprocessed precursor] Molecular weight: 49687 Da [This is the MW of the unprocessed precursor] CRC64: 76E63E3A97D1EFEC [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNPNQKIITI GSICMVVGII SLILQIGNII SIWISHSIQT GNQNHTGICN QGIITYNVVA 

        70         80         90        100        110        120 
GQDSTSVILT GNSSLCPIRG WAIHSKDNGI RIGSKGDVFV IREPFISCSH LECRTFFLTQ 

       130        140        150        160        170        180 
GALLNDKHSN GTVKDRSPYR ALMSCPVGEA PSPYNSRFES VAWSASACHD GMGWLTIGIS 

       190        200        210        220        230        240 
GPDNGAVAVL KYNGIITETI KSWRKKILRT QESECTCVNG SCFTIMTDGP SNGLASYKIF 

       250        260        270        280        290        300 
KIEKGKVTKS IELNAPNSHY EECSCYPDTG KVMCVCRDNW HGSNRPWVSF DQNLDYQIGY 

       310        320        330        340        350        360 
ICSGVFGDNP RPKDGPGSCG PVSADGANGV KGFSYRYGNG VWIGRTKSDS SRHGFEMIWD 

       370        380        390        400        410        420 
PNGWTETDSR FSVRQDVVAM TDRSGYSGSF VQHPELTGLD CMRPCFWVEL IRGRPEEETI 

       430        440        450 
WTSGSIISFC GVNSDTVDWS WPDGAELPFT IDK 

P03470 in FASTA format

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View entry in raw text format (no links)
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