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UniProtKB/Swiss-Prot entry P03468


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NRAM_I34A1
Primary accession number P03468
Secondary accession numbers A4GXH6 Q20N35 Q84043 Q8JUU4
Integrated into Swiss-Prot on July 21, 1986
Sequence was last modified on March 6, 2007 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 73)
Name and origin of the protein
Protein name Neuraminidase
Synonym EC 3.2.1.18
Gene name
Name: NA
From
Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) [TaxID: 211044] 
Taxonomy Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A.
Virus hosts Aves [TaxID: 8782]
Homo sapiens (Human) [TaxID: 9606]
Sus scrofa (Pig) [TaxID: 9823]
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC RNA].
DOI=10.1038/290213a0; PubMed=7010182 [NCBI, ExPASy, EBI, Israel, Japan]
Fields S., Winter G., Brownlee G.G.;
"Structure of the neuraminidase gene in human influenza virus A/PR/8/34.";
Nature 290:213-217(1981).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC RNA].
DOI=10.1098/rstb.2001.0979; PubMed=11779399 [NCBI, ExPASy, EBI, Israel, Japan]
Schickli J.H., Flandorfer A., Nakaya T., Martinez-Sobrido L., Garcia-Sastre A., Palese P.;
"Plasmid-only rescue of influenza A virus vaccine candidates.";
Philos. Trans. R. Soc. Lond., B, Biol. Sci. 356:1965-1973(2001).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC RNA], AND REVERSE GENETICS.
DOI=10.1016/j.virusres.2004.02.028; PubMed=15163504 [NCBI, ExPASy, EBI, Israel, Japan]
de Wit E., Spronken M.I.J., Bestebroer T.M., Rimmelzwaan G.F., Osterhaus A.D.M.E., Fouchier R.A.M.;
"Efficient generation and growth of influenza virus A/PR/8/34 from eight cDNA fragments.";
Virus Res. 103:155-161(2004).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC RNA].
Ghedin E., Spiro D., Miller N., Zaborsky J., Feldblyum T., Subbu V., Shumway M., Sparenborg J., Groveman L., Halpin R., Sitz J., Koo H., Salzberg S.L., Webster R.G., Hoffmann E., Krauss S., Naeve C., Bao Y., Bolotov P., Dernovoy D., Kiryutin B., Lipman D.J., Tatusova T.;
"The NIAID influenza genome sequencing project.";
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [GENOMIC RNA] OF 1-71.
DOI=10.1016/0042-6822(82)90162-3; PubMed=6927853 [NCBI, ExPASy, EBI, Israel, Japan]
Blok J., Air G.M.;
"Sequence variation at the 3' end of the neuraminidase gene from 39 influenza type A viruses.";
Virology 121:211-229(1982).
[6]
REVIEW.
DOI=10.1016/j.virusres.2004.08.012; PubMed=15567494 [NCBI, ExPASy, EBI, Israel, Japan]
Nayak D.P., Hui E.K., Barman S.;
"Assembly and budding of influenza virus.";
Virus Res. 106:147-165(2004).
[7]
REVIEW.
DOI=10.1056/NEJMra050740; PubMed=16192481 [NCBI, ExPASy, EBI, Israel, Japan]
Moscona A.;
"Neuraminidase inhibitors for influenza.";
N. Engl. J. Med. 353:1363-1373(2005).
[8]
REVIEW.
DOI=10.1248/bpb.28.399; PubMed=15744059 [NCBI, ExPASy, EBI, Israel, Japan]
Suzuki Y.;
"Sialobiology of influenza: molecular mechanism of host range variation of influenza viruses.";
Biol. Pharm. Bull. 28:399-408(2005).
Comments
  • FUNCTION: Catalyzes the removal of terminal sialic acid residues from viral and cellular glycoconjugates. Cleaves off the terminal sialic acids on the glycosylated HA during virus budding to facilitate virus release. Additionally helps virus spread through the circulation by further removing sialic acids from the cell surface. These cleavages prevent self-aggregation and ensure the efficient spread of the progeny virus from cell to cell. Otherwise, infection would be limited to one round of replication. Described as a receptor-destroying enzyme because it cleaves a terminal sialic acid from the cellular receptors. May facilitate viral invasion of the upper airways by cleaving the sialic acid moities on the mucin of the airway epithelial cells. Likely to plays a role in the budding process through its association with lipid rafts during intracellular transport. May additionally display a raft-association independent effect on budding. Plays a role in the determination of host range restriction on replication and virulence. Sialidase activity in late endosome/lysosome traffic seems to enhance virus replication.
  • CATALYTIC ACTIVITY: Hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
  • COFACTOR: Binds 1 calcium ion (By similarity).
  • ENZYME REGULATION: Inhibited by the neuraminidase inhibitors zanamivir (Relenza) and oseltamivir (Tamiflu). These drugs interfere with the release of progeny virus from infected cells and are effective against all influenza strains. Resistance to neuraminidase inhibitors is quite rare.
  • SUBUNIT: Homotetramer (By similarity).
  • SUBCELLULAR LOCATION: Virion membrane (By similarity). Apical cell membrane; Single-pass type II membrane protein (By similarity). Note=Preferentially accumulates at the apical plasma membrane in infected polarized epithelial cells, which is the virus assembly site. Uses lipid rafts for cell surface transport and apical sorting. In the virion, forms a mushroom-shaped spike on the surface of the membrane (By similarity).
  • DOMAIN: Intact N-terminus is essential for virion morphogenesis. Possess two apical sorting signals, one in the ectodomain, which is likely to be a glycan, and the other in the transmembrane domain. The transmembrane domain also plays a role in lipid raft association (By similarity).
  • PTM: N-glycosylated (By similarity).
  • MISCELLANEOUS: The influenza A genome consist of 8 RNA segments. Genetic variation of hemagglutinin and/or neuraminidase genes results in the emergence of new influenza strains. The mechanism of variation can be the result of point mutations or the result of genetic reassortment between segments of two different strains.
  • SIMILARITY: Belongs to the glycosyl hydrolase 34 family [view classification].
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
J02146; AAA43412.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF389120; AAM75160.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EF467823; ABO21711.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CY009446; ABD77678.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
K01031; AAA43415.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_040981.1; -.
3D structure databases
HSSP P03472; 1F8E. [HSSP ENTRY / PDB]
SMR P03468; 68-452.
ModBase P03468.
Enzyme and pathway databases
Reactome REACT_6167; Influenza Infection.
Ontologies
GO
GO:0030666; Cellular component: endocytic vesicle membrane (inferred from experiment from Reactome).
GO:0005789; Cellular component: endoplasmic reticulum membrane (inferred from experiment from Reactome).
GO:0000139; Cellular component: Golgi membrane (inferred from experiment from Reactome).
GO:0005886; Cellular component: plasma membrane (inferred from experiment from Reactome).
GO:0016504; Molecular function: protease activator activity (inferred from experiment from Reactome).
QuickGo view.
Family and domain databases
InterPro IPR001860; Glyco_hydro_34.
Graphical view of domain structure.
Pfam PF00064; Neur; 1.
Pfam graphical view of domain structure.
ProDom PD000431; Glyco_hydro_34; 1.
[Domain structure / List of seq. sharing at least 1 domain]
BLOCKS P03468.
ProtoNet P03468.
Genome annotation databases
GeneID 956530; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Cell membrane; Complete proteome; Glycoprotein; Glycosidase; Hydrolase; Membrane; Metal-binding; Signal-anchor; Transmembrane; Virion.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   454  454     Neuraminidase. PRO_0000078712
TOPO_DOM   1     6  6     Cytoplasmic (Potential). 
TRANSMEM   7    35  29     Signal-anchor for type II membrane protein (Potential). 
TOPO_DOM   36   454  419     Extracellular (Potential). 
REGION   11    33  23     Involved in apical transport and lipid raft association (By similarity). 
REGION   36    75  40     Hypervariable stalk region. 
REGION   76   454  379     Head of neuraminidase. 
ACT_SITE   136   136        Potential. 
ACT_SITE   262   262        Potential. 
ACT_SITE   387   387        Potential. 
METAL   279   279        Calcium; via carbonyl oxygen (By similarity). 
METAL   283   283        Calcium; via carbonyl oxygen (By similarity). 
METAL   309   309        Calcium (By similarity). 
METAL   329   329        Calcium; via carbonyl oxygen (By similarity). 
BINDING   103   103        Substrate (Potential). 
BINDING   278   278        Substrate (Potential). 
BINDING   353   353        Substrate (Potential). 
CARBOHYD   44    44        N-linked (GlcNAc...) (Potential). 
CARBOHYD   58    58        N-linked (GlcNAc...) (Potential). 
CARBOHYD   73    73        N-linked (GlcNAc...) (Potential). 
CARBOHYD   131   131        N-linked (GlcNAc...) (Potential). 
CARBOHYD   220   220        N-linked (GlcNAc...) (Potential). 
DISULFID   77   402        By similarity. 
DISULFID   109   114        By similarity. 
DISULFID   169   216        By similarity. 
DISULFID   218   223        By similarity. 
DISULFID   264   277        By similarity. 
DISULFID   266   275        By similarity. 
DISULFID   303   320        By similarity. 
DISULFID   406   431        By similarity. 
CONFLICT   8     8        I -> T (in Ref. 2; AAM75160). 
CONFLICT   51    51        Q -> H (in Ref. 5; AAA43415). 
CONFLICT   128   128        K -> R (in Ref. 1; AAA43412). 
CONFLICT   131   131        N -> S (in Ref. 3; ABO21711 and 4; ABD77678). 
CONFLICT   314   314        E -> K (in Ref. 1; AAA43412). 
CONFLICT   403   403        M -> I (in Ref. 1; AAA43412). 
CONFLICT   451   451        S -> T (in Ref. 1; AAA43412). 
Sequence information
Length: 454 AA [This is the length of the unprocessed precursor] Molecular weight: 50121 Da [This is the MW of the unprocessed precursor] CRC64: 7C52E0A9FD93A98B [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNPNQKIITI GSICLVVGLI SLILQIGNII SIWISHSIQT GSQNHTGICN QNIITYKNST 

        70         80         90        100        110        120 
WVKDTTSVIL TGNSSLCPIR GWAIYSKDNS IRIGSKGDVF VIREPFISCS HLECRTFFLT 

       130        140        150        160        170        180 
QGALLNDKHS NGTVKDRSPY RALMSCPVGE APSPYNSRFE SVAWSASACH DGMGWLTIGI 

       190        200        210        220        230        240 
SGPDNGAVAV LKYNGIITET IKSWRKKILR TQESECACVN GSCFTIMTDG PSDGLASYKI 

       250        260        270        280        290        300 
FKIEKGKVTK SIELNAPNSH YEECSCYPDT GKVMCVCRDN WHGSNRPWVS FDQNLDYQIG 

       310        320        330        340        350        360 
YICSGVFGDN PRPEDGTGSC GPVYVDGANG VKGFSYRYGN GVWIGRTKSH SSRHGFEMIW 

       370        380        390        400        410        420 
DPNGWTETDS KFSVRQDVVA MTDWSGYSGS FVQHPELTGL DCMRPCFWVE LIRGRPKEKT 

       430        440        450 
IWTSASSISF CGVNSDTVDW SWPDGAELPF SIDK 

P03468 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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