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UniProtKB/Swiss-Prot entry P02588


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name TNNC2_CHICK
Primary accession number P02588
Secondary accession numbers None
Integrated into Swiss-Prot on July 21, 1986
Sequence was last modified on January 23, 2007 (Sequence version 3)
Annotations were last modified on    November 4, 2008 (Entry version 86)
Name and origin of the protein
Protein name Troponin C, skeletal muscle
Synonyms None
Gene name
Name: TNNC2
From
Gallus gallus (Chicken) [TaxID: 9031] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=2963002 [NCBI, ExPASy, EBI, Israel, Japan]
Reinach F.C., Karlsson R.;
"Cloning, expression, and site-directed mutagenesis of chicken skeletal muscle troponin C.";
J. Biol. Chem. 263:2371-2376(1988).
[2]
PROTEIN SEQUENCE OF 2-163.
PubMed=1908459 [NCBI, ExPASy, EBI, Israel, Japan]
Golosinska K., Pearlstone J.R., Borgford T., Oikawa K., Kay C.M., Carpenter M.R., Smillie L.B.;
"Determination of and corrections to sequences of turkey and chicken troponins-C. Effects of Thr-130 to Ile mutation on Ca2+ affinity.";
J. Biol. Chem. 266:15797-15809(1991).
[3]
PRELIMINARY PROTEIN SEQUENCE OF 2-163.
DOI=10.1016/0014-5793(76)80769-7; PubMed=992069 [NCBI, ExPASy, EBI, Israel, Japan]
Wilkinson J.M.;
"The amino acid sequence of troponin C from chicken skeletal muscle.";
FEBS Lett. 70:254-256(1976).
[4]
X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS).
PubMed=3969570 [NCBI, ExPASy, EBI, Israel, Japan]
Sundaralingam M., Bergstrom R., Strasburg G., Rao S.T., Raychowdhory P., Greaser M.L., Wang B.C.;
"Molecular structure of troponin C from chicken skeletal muscle at 3-A resolution.";
Science 227:945-948(1985).
[5]
X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS).
PubMed=3338985 [NCBI, ExPASy, EBI, Israel, Japan]
Satyshur K.A., Rao S.T., Pyzalska D., Drendel W., Greaser M.L., Sundaralingam M.;
"Refined structure of chicken skeletal muscle troponin C in the two-calcium state at 2-A resolution.";
J. Biol. Chem. 263:1628-1647(1988).
[6]
X-RAY CRYSTALLOGRAPHY (1.78 ANGSTROMS).
DOI=10.1107/S090744499300798X; PubMed=15299475 [NCBI, ExPASy, EBI, Israel, Japan]
Satyshur K.A., Pyzalska D., Rao S.T., Greaser M.L., Sundaralingam M.;
"Structure of chicken skeletal muscle troponin C at 1.78-A resolution.";
Acta Crystallogr. D 50:40-49(1994).
[7]
X-RAY CRYSTALLOGRAPHY (1.75 ANGSTROMS).
DOI=10.1006/jmbi.1997.1257; PubMed=9367759 [NCBI, ExPASy, EBI, Israel, Japan]
Strynadka N.C., Cherney M., Sielecki A.R., Li M.X., Smillie L.B., James M.N.G.;
"Structural details of a calcium-induced molecular switch: X-ray crystallographic analysis of the calcium-saturated N-terminal domain of troponin C at 1.75-A resolution.";
J. Mol. Biol. 273:238-255(1997).
[8]
STRUCTURE BY NMR OF 94-127.
DOI=10.1021/bi00155a009; PubMed=1390738 [NCBI, ExPASy, EBI, Israel, Japan]
Shaw G.S., Hodges R.S., Sykes B.D.;
"Determination of the solution structure of a synthetic two-site calcium-binding homodimeric protein domain by NMR spectroscopy.";
Biochemistry 31:9572-9580(1992).
[9]
STRUCTURE BY NMR.
DOI=10.1021/bi00049a010; PubMed=8519752 [NCBI, ExPASy, EBI, Israel, Japan]
Slupsky C.M., Sykes B.D.;
"NMR solution structure of calcium-saturated skeletal muscle troponin C.";
Biochemistry 34:15953-15964(1995).
[10]
STRUCTURE BY NMR.
DOI=10.1021/bi982936e; PubMed=10231519 [NCBI, ExPASy, EBI, Israel, Japan]
Tsuda S., Miura A., Gagne S.M., Spyracopoulos L., Sykes B.D.;
"Low-temperature-induced structural changes in the Apo regulatory domain of skeletal muscle troponin C.";
Biochemistry 38:5693-5700(1999).
Comments
  • FUNCTION: Troponin is the central regulatory protein of striated muscle contraction. Tn consists of three components: Tn-I which is the inhibitor of actomyosin ATPase, Tn-T which contains the binding site for tropomyosin and Tn-C. The binding of calcium to Tn-C abolishes the inhibitory action of Tn on actin filaments.
  • MISCELLANEOUS: Skeletal muscle troponin C binds four calcium ions.
  • SIMILARITY: Belongs to the troponin C family.
  • SIMILARITY: Contains 4 EF-hand domains.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M19027; AAA49097.1; ALT_SEQ; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A03015; TPCHCS.
RefSeq NP_990781.1; -.
UniGene Gga.823
3D structure databases
PDB
1AVS; X-ray; 1.75 A; A/B=1-91.[ExPASy / RCSB / EBI]
1BLQ; NMR; -; A=1-91.[ExPASy / RCSB / EBI]
1EW7; Model; -; C=3-162.[ExPASy / RCSB / EBI]
1JC2; NMR; -; A=89-163.[ExPASy / RCSB / EBI]
1NCX; X-ray; 1.80 A; A=1-163.[ExPASy / RCSB / EBI]
1NCY; X-ray; 2.10 A; A=1-163.[ExPASy / RCSB / EBI]
1NCZ; X-ray; 1.80 A; A=1-163.[ExPASy / RCSB / EBI]
1NPQ; NMR; -; A=1-91.[ExPASy / RCSB / EBI]
1PON; NMR; -; A=94-127, B=130-163.[ExPASy / RCSB / EBI]
1SKT; NMR; -; A=1-91.[ExPASy / RCSB / EBI]
1SMG; NMR; -; A=1-91.[ExPASy / RCSB / EBI]
1TNP; NMR; -; A=1-91.[ExPASy / RCSB / EBI]
1TNQ; NMR; -; A=1-91.[ExPASy / RCSB / EBI]
1TNW; NMR; -; A=1-163.[ExPASy / RCSB / EBI]
1TNX; NMR; -; A=1-163.[ExPASy / RCSB / EBI]
1TOP; X-ray; 1.78 A; A=1-163.[ExPASy / RCSB / EBI]
1YTZ; X-ray; 3.00 A; C=1-163.[ExPASy / RCSB / EBI]
1YV0; X-ray; 7.00 A; C=1-163.[ExPASy / RCSB / EBI]
1ZAC; NMR; -; A=1-91.[ExPASy / RCSB / EBI]
4TNC; X-ray; 2.00 A; A=6-163.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1AVS; -.
1BLQ; -.
1EW7; -.
1JC2; -.
1NCX; -.
1NCY; -.
1NCZ; -.
1NPQ; -.
1PON; -.
1SKT; -.
1SMG; -.
1TNP; -.
1TNQ; -.
1TNW; -.
1TNX; -.
1TOP; -.
1YTZ; -.
1YV0; -.
1ZAC; -.
4TNC; -.
ModBase P02588.
Family and domain databases
InterPro IPR011992; EF-Hand_type.
IPR002048; EF_hand_Ca_bd.
Graphical view of domain structure.
Gene3D G3DSA:1.10.238.10; EF-Hand_type; 1.
Pfam PF00036; efhand; 4.
Pfam graphical view of domain structure.
ProDom PD000012; EF-hand; 2.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00054; EFh; 4.
SMART graphical view of domain structure.
PROSITE PS00018; EF_HAND_1; 4.
PS50222; EF_HAND_2; 4.
PROSITE graphical view of domain structure (profiles).
BLOCKS P02588.
ProtoNet P02588.
Genome annotation databases
Ensembl ENSGALG00000006835; Gallus gallus. [Contig view]
GeneID 396434; -.
KEGG gga:396434; -.
Phylogenomic databases
HOGENOM P02588; -.
HOVERGEN P02588; -.
Other
LinkHub P02588; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Calcium; Direct protein sequencing; Muscle protein; Repeat.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   163  162     Troponin C, skeletal muscle. PRO_0000073707
DOMAIN   18    53  36     EF-hand 1. 
DOMAIN   54    89  36     EF-hand 2. 
DOMAIN   94   129  36     EF-hand 3. 
DOMAIN   130   163  34     EF-hand 4. 
CA_BIND   31    42  12     1. 
CA_BIND   67    78  12     2. 
CA_BIND   107   118  12     3. 
CA_BIND   143   154  12     4. 
MOD_RES   2     2        Blocked amino end (Ala). 
MUTAGEN   131   131        T->I: Decreases calcium affinity. 
HELIX   11    14  4      
HELIX   17    30  14      
STRAND   35    38  4      
HELIX   40    49  10      
HELIX   56    66  11      
STRAND   72    75  4      
HELIX   76    87  12      
HELIX   92   106  15      
STRAND   111   114  4      
HELIX   116   124  9      
HELIX   132   142  11      
STRAND   147   150  4      
HELIX   152   160  9      
Sequence information
Length: 163 AA [This is the length of the unprocessed precursor] Molecular weight: 18375 Da [This is the MW of the unprocessed precursor] CRC64: C4E1D9F40FFED3BC [This is a checksum on the sequence]
        10         20         30         40         50         60 
MASMTDQQAE ARAFLSEEMI AEFKAAFDMF DADGGGDIST KELGTVMRML GQNPTKEELD 

        70         80         90        100        110        120 
AIIEEVDEDG SGTIDFEEFL VMMVRQMKED AKGKSEEELA NCFRIFDKNA DGFIDIEELG 

       130        140        150        160 
EILRATGEHV TEEDIEDLMK DSDKNNDGRI DFDEFLKMME GVQ 

P02588 in FASTA format

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