[1]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=ATCC 26109 / X2180;
DOI=10.1093/nar/16.22.10441; PubMed=2849749 [NCBI, ExPASy, EBI, Israel, Japan]
Kolakowski L.F. Jr.,
Schloesser M.,
Cooperman B.S.;
"Cloning, molecular characterization and chromosome localization of the inorganic pyrophosphatase (PPA) gene from S. cerevisiae.";
Nucleic Acids Res. 16:10441-10452(1988).
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[2]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 204508 / S288c;
PubMed=7813418 [NCBI, ExPASy, EBI, Israel, Japan]
Feldmann H.,
Aigle M.,
Aljinovic G.,
Andre B.,
Baclet M.C.,
Barthe C.,
Baur A.,
Becam A.-M.,
Biteau N.,
Boles E.,
Brandt T.,
Brendel M.,
Brueckner M.,
Bussereau F.,
Christiansen C.,
Contreras R.,
Crouzet M.,
Cziepluch C.,
Demolis N., ![]()
Delaveau T.,
Doignon F.,
Domdey H.,
Duesterhus S.,
Dubois E.,
Dujon B.,
El Bakkoury M.,
Entian K.-D.,
Feuermann M.,
Fiers W.,
Fobo G.M.,
Fritz C.,
Gassenhuber J.,
Glansdorff N.,
Goffeau A.,
Grivell L.A.,
de Haan M.,
Hein C.,
Herbert C.J.,
Hollenberg C.P.,
Holmstroem K.,
Jacq C.,
Jacquet M.,
Jauniaux J.-C.,
Jonniaux J.-L.,
Kallesoee T.,
Kiesau P.,
Kirchrath L.,
Koetter P.,
Korol S.,
Liebl S.,
Logghe M.,
Lohan A.J.E.,
Louis E.J.,
Li Z.Y.,
Maat M.J.,
Mallet L.,
Mannhaupt G.,
Messenguy F.,
Miosga T.,
Molemans F.,
Mueller S.,
Nasr F.,
Obermaier B.,
Perea J.,
Pierard A.,
Piravandi E.,
Pohl F.M.,
Pohl T.M.,
Potier S.,
Proft M.,
Purnelle B.,
Ramezani Rad M.,
Rieger M.,
Rose M.,
Schaaff-Gerstenschlaeger I.,
Scherens B.,
Schwarzlose C.,
Skala J.,
Slonimski P.P.,
Smits P.H.M.,
Souciet J.-L.,
Steensma H.Y.,
Stucka R.,
Urrestarazu L.A.,
van der Aart Q.J.M.,
Van Dyck L.,
Vassarotti A.,
Vetter I.,
Vierendeels F.,
Vissers S.,
Wagner G.,
de Wergifosse P.,
Wolfe K.H.,
Zagulski M.,
Zimmermann F.K.,
Mewes H.-W.,
Kleine K.;
"Complete DNA sequence of yeast chromosome II.";
EMBO J. 13:5795-5809(1994).
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[3]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=ATCC 204508 / S288c;
DOI=10.1101/gr.6037607; PubMed=17322287 [NCBI, ExPASy, EBI, Israel, Japan]
Hu Y.,
Rolfs A.,
Bhullar B.,
Murthy T.V.S.,
Zhu C.,
Berger M.F.,
Camargo A.A.,
Kelley F.,
McCarron S.,
Jepson D.,
Richardson A.,
Raphael J.,
Moreira D.,
Taycher E.,
Zuo D.,
Mohr S.,
Kane M.F.,
Williamson J.,
Simpson A.J.G., ![]()
Bulyk M.L.,
Harlow E.,
Marsischky G.,
Kolodner R.D.,
LaBaer J.;
"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae.";
Genome Res. 17:536-543(2007).
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[4]
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PROTEIN SEQUENCE OF 2-287.
PubMed=340461 [NCBI, ExPASy, EBI, Israel, Japan]
Cohen S.A.,
Sterner R.,
Keim P.S.,
Heinrikson R.L.;
"Covalent structural analysis of yeast inorganic pyrophosphatase.";
J. Biol. Chem. 253:889-897(1978).
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[5]
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PROTEIN SEQUENCE OF 26-36 AND 240-252.
STRAIN=ATCC 204508 / S288c;
PubMed=7895733 [NCBI, ExPASy, EBI, Israel, Japan]
Garrels J.I.,
Futcher B.,
Kobayashi R.,
Latter G.I.,
Schwender B.,
Volpe T.,
Warner J.R.,
McLaughlin C.S.;
"Protein identifications for a Saccharomyces cerevisiae protein database.";
Electrophoresis 15:1466-1486(1994).
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[6]
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PROTEIN SEQUENCE OF 240-250.
STRAIN=ATCC 38531 / Y41;
DOI=10.1016/0378-1097(96)00006-7; PubMed=8935650 [NCBI, ExPASy, EBI, Israel, Japan]
Norbeck J.,
Blomberg A.;
"Protein expression during exponential growth in 0.7 M NaCl medium of Saccharomyces cerevisiae.";
FEMS Microbiol. Lett. 137:1-8(1996).
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[7]
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ACTIVE SITE TYR-90.
DOI=10.1016/0014-5793(92)81051-M; PubMed=1322842 [NCBI, ExPASy, EBI, Israel, Japan]
Raznikov A.V.,
Sklyankina V.A.,
Avaeva S.M.;
"Tyrosine-89 is important for enzymatic activity of S. cerevisiae inorganic pyrophosphatase.";
FEBS Lett. 308:62-64(1992).
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[8]
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ACTIVE SITE.
DOI=10.1021/bi00542a015; PubMed=6101539 [NCBI, ExPASy, EBI, Israel, Japan]
Bond M.W.,
Chiu N.Y.,
Cooperman B.S.;
"Identification of an arginine important for enzymatic activity within the covalent structure of yeast inorganic pyrophosphatase.";
Biochemistry 19:94-102(1980).
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[9]
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LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
DOI=10.1038/nature02046; PubMed=14562106 [NCBI, ExPASy, EBI, Israel, Japan]
Ghaemmaghami S.,
Huh W.-K.,
Bower K.,
Howson R.W.,
Belle A.,
Dephoure N.,
O'Shea E.K.,
Weissman J.S.;
"Global analysis of protein expression in yeast.";
Nature 425:737-741(2003).
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[10]
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PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-251 AND SER-286, AND MASS SPECTROMETRY.
DOI=10.1074/mcp.M400219-MCP200; PubMed=15665377 [NCBI, ExPASy, EBI, Israel, Japan]
Gruhler A.,
Olsen J.V.,
Mohammed S.,
Mortensen P.,
Faergeman N.J.,
Mann M.,
Jensen O.N.;
"Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.";
Mol. Cell. Proteomics 4:310-327(2005).
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[11]
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PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-251, AND MASS SPECTROMETRY.
DOI=10.1021/pr060559j; PubMed=17330950 [NCBI, ExPASy, EBI, Israel, Japan]
Li X.,
Gerber S.A.,
Rudner A.D.,
Beausoleil S.A.,
Haas W.,
Villen J.,
Elias J.E.,
Gygi S.P.;
"Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.";
J. Proteome Res. 6:1190-1197(2007).
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[12]
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PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-61 AND SER-266, AND MASS SPECTROMETRY.
DOI=10.1073/pnas.0701622104; PubMed=17563356 [NCBI, ExPASy, EBI, Israel, Japan]
Smolka M.B.,
Albuquerque C.P.,
Chen S.H.,
Zhou H.;
"Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases.";
Proc. Natl. Acad. Sci. U.S.A. 104:10364-10369(2007).
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[13]
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PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-65; THR-247; THR-251; THR-253; SER-255 AND SER-266, AND MASS SPECTROMETRY.
DOI=10.1074/mcp.M700468-MCP200; PubMed=18407956 [NCBI, ExPASy, EBI, Israel, Japan]
Albuquerque C.P.,
Smolka M.B.,
Payne S.H.,
Bafna V.,
Eng J.,
Zhou H.;
"A multidimensional chromatography technology for in-depth phosphoproteome analysis.";
Mol. Cell. Proteomics 0:0-0(2008).
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[14]
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X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS).
Arutiunian E.G.,
Terzian S.S.,
Voronova A.A.,
Kuranova I.P.,
Smirnova E.A.,
Vainstein B.K.,
Hohne W.E.,
Hansen G.;
"X-ray diffraction study of inorganic pyrophosphatase from baker's yeast at the 3-A resolution.";
Dokl. Akad. Nauk SSSR 258:1481-1492(1981).
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[15]
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X-RAY CRYSTALLOGRAPHY (2.2 ANGSTROMS).
DOI=10.1016/S0969-2126(96)00155-4; PubMed=8994974 [NCBI, ExPASy, EBI, Israel, Japan]
Heikinheimo P.,
Lehtonen J.,
Baykov A.,
Lahti R.,
Cooperman B.S.,
Goldman A.;
"The structural basis for pyrophosphatase catalysis.";
Structure 4:1491-1508(1996).
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[16]
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X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS).
Swaminathan K.,
Cooperman B.S.,
Lahti R.,
Voet D.;
Submitted (DEC-1997) to the PDB data bank.
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[17]
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X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS) OF MUTANTS LYS-79 AND LYS-118.
DOI=10.1006/jmbi.1998.2266; PubMed=9878371 [NCBI, ExPASy, EBI, Israel, Japan]
Tuominen V.,
Heikinheimo P.,
Kajander T.,
Torkkel T.,
Hyytia T.,
Kapyla J.,
Lahti R.,
Cooperman B.S.,
Goldman A.;
"The R78K and D117E active-site variants of Saccharomyces cerevisiae soluble inorganic pyrophosphatase: structural studies and mechanistic implications.";
J. Mol. Biol. 284:1565-1580(1998).
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[18]
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SIMILARITY TO E.COLI AND K.LACTIS PPASES.
DOI=10.1016/0167-4838(90)90246-C; PubMed=2160278 [NCBI, ExPASy, EBI, Israel, Japan]
Lahti R.,
Kolakowski L.F. Jr.,
Heinonen J.,
Vihinen M.,
Pohjanoksa K.,
Cooperman B.S.;
"Conservation of functional residues between yeast and E. coli inorganic pyrophosphatases.";
Biochim. Biophys. Acta 1038:338-345(1990).
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