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UniProtKB/Swiss-Prot entry P00697


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LYSC1_RAT
Primary accession number P00697
Secondary accession numbers None
Integrated into Swiss-Prot on July 21, 1986
Sequence was last modified on October 1, 1994 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 76)
Name and origin of the protein
Protein name Lysozyme C-1 [Precursor]
Synonyms EC 3.2.1.17
1,4-beta-N-acetylmuramidase C
Gene name
Name: Lyz1
Synonyms: Lyz
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=Sprague-Dawley;
DOI=10.1006/mpev.1993.1007; PubMed=8081549 [NCBI, ExPASy, EBI, Israel, Japan]
Yeh T.C., Wilson A.C., Irwin D.M.;
"Evolution of rodent lysozymes: isolation and sequence of the rat lysozyme genes.";
Mol. Phylogenet. Evol. 2:65-75(1993).
[2]
PROTEIN SEQUENCE OF 19-148.
STRAIN=Wistar;
DOI=10.1021/bi00626a030; PubMed=851497 [NCBI, ExPASy, EBI, Israel, Japan]
White T.J., Mross G.A., Osserman E.F., Wilson A.C.;
"Primary structure of rat lysozyme.";
Biochemistry 16:1430-1436(1977).
Comments
  • FUNCTION: Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. In the intestine they may also have a digestive function.
  • CATALYTIC ACTIVITY: Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins.
  • SUBUNIT: Monomer.
  • TISSUE SPECIFICITY: Expressed in lung, small intestine and spleen.
  • MISCELLANEOUS: Lysozyme C is capable of both hydrolysis and transglycosylation; it shows also a slight esterase activity. It acts rapidly on both peptide-substituted and unsubstituted peptidoglycan, and slowly on chitin oligosaccharides.
  • MISCELLANEOUS: Rat has two lysozymes, type 1 and type 2 of which only type 1 is expressed; type 2 being probably a pseudogene.
  • SIMILARITY: Belongs to the glycosyl hydrolase 22 family [view classification].
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L12459; AAA41551.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A40729; LZRT.
UniGene Rn.2283
3D structure databases
HSSP P08905; 1IVM. [HSSP ENTRY / PDB]
SMR P00697; 19-148.
ModBase P00697.
Organism-specific databases
RGD 3026; Lyz.
Gene expression databases
ArrayExpress P00697; -.
GermOnline ENSRNOG00000005825; Rattus norvegicus.
Ontologies
GO
GO:0019835; Biological process: cytolysis (inferred from electronic annotation from UniProtKB-KW).
GO:0042742; Biological process: defense response to bacterium (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001916; Glyco_hydro_22.
IPR000974; Glyco_hydro_22_lys.
Graphical view of domain structure.
Pfam PF00062; Lys; 1.
Pfam graphical view of domain structure.
PRINTS PR00137; LYSOZYME.
PR00135; LYZLACT.
SMART SM00263; LYZ1; 1.
SMART graphical view of domain structure.
PROSITE PS00128; LACTALBUMIN_LYSOZYME_1; 1.
PS51348; LACTALBUMIN_LYSOZYME_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P00697.
ProtoNet P00697.
Genome annotation databases
Ensembl ENSRNOG00000005825; Rattus norvegicus. [Contig view]
Phylogenomic databases
HOVERGEN P00697; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Antimicrobial; Bacteriolytic enzyme; Direct protein sequencing; Glycosidase; Hydrolase; Milk protein; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
SIGNAL   1    18  18      
CHAIN   19   148  130     Lysozyme C-1. PRO_0000018484
ACT_SITE   53    53        By similarity. 
ACT_SITE   71    71        By similarity. 
DISULFID   24   146        By similarity. 
DISULFID   48   134        By similarity. 
DISULFID   83    99        By similarity. 
DISULFID   95   113        By similarity. 
CONFLICT   20    20        I -> T (in Ref. 2; AA sequence). 
CONFLICT   64    64        N -> D (in Ref. 2; AA sequence). 
Sequence information
Length: 148 AA [This is the length of the unprocessed precursor] Molecular weight: 16729 Da [This is the MW of the unprocessed precursor] CRC64: 8E6E986539BD3EEE [This is a checksum on the sequence]
        10         20         30         40         50         60 
MKALLVLGFL LLSASVQAKI YERCQFARTL KRNGMSGYYG VSLADWVCLA QHESNYNTQA 

        70         80         90        100        110        120 
RNYNPGDQST DYGIFQINSR YWCNDGKTPR AKNACGIPCS ALLQDDITQA IQCAKRVVRD 

       130        140 
PQGIRAWVAW QRHCKNRDLS GYIRNCGV 

P00697 in FASTA format

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