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UniProtKB/Swiss-Prot entry P00344


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LDH_BACST
Primary accession number P00344
Secondary accession numbers None
Integrated into Swiss-Prot on July 21, 1986
Sequence was last modified on January 1, 1988 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 88)
Name and origin of the protein
Protein name L-lactate dehydrogenase
Synonyms L-LDH
EC 1.1.1.27
Gene name
Name: ldh
Synonyms: lct
From
Bacillus stearothermophilus (Geobacillus stearothermophilus) [TaxID: 1422] 
Taxonomy Bacteria; Firmicutes; Bacillales; Bacillaceae; Geobacillus.
Protein existence 1: Evidence at protein level;
References
[1]
PROTEIN SEQUENCE.
STRAIN=ATCC 29609 / DSM 2027 / NCA 1503 / NCIB 8924;
PubMed=6352452 [NCBI, ExPASy, EBI, Israel, Japan]
Wirz B., Suter F., Zuber H.;
"Structure and function of L-lactate dehydrogenases from thermophilic and mesophilic bacteria. III) The primary structure of thermophilic lactate dehydrogenase from Bacillus stearothermophilus. Hydroxylamine-, o-iodosobenzoic acid- and tryptic-fragments. The complete amino-acid sequence.";
Hoppe-Seyler's Z. Physiol. Chem. 364:893-909(1983).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1016/0378-1119(86)90165-4; PubMed=3026926 [NCBI, ExPASy, EBI, Israel, Japan]
Barstow D.A., Clarke A.R., Chia W.N., Wigley D., Sharman A.F., Holbrook J.J., Atkinson T., Minton N.P.;
"Cloning, expression and complete nucleotide sequence of the Bacillus stearothermophilus L-lactate dehydrogenase gene.";
Gene 46:47-55(1986).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=3675869 [NCBI, ExPASy, EBI, Israel, Japan]
Zuelli F., Weber H., Zuber H.;
"Structure and function of L-lactate dehydrogenases from thermophilic and mesophilic bacteria, VI. Nucleotide sequences of lactate dehydrogenase genes from the thermophilic bacteria Bacillus stearothermophilus, B. caldolyticus and B. caldotenax.";
Biol. Chem. Hoppe-Seyler 368:1167-1177(1987).
[4]
PARTIAL PROTEIN SEQUENCE.
STRAIN=ATCC 29609 / DSM 2027 / NCA 1503 / NCIB 8924;
PubMed=6618448 [NCBI, ExPASy, EBI, Israel, Japan]
Tratschin J.D., Wirz B., Frank G., Zuber H.;
"Structure and function of L-lactate dehydrogenases from thermophilic and mesophilic bacteria. II) The primary structure of thermophilic lactate dehydrogenase from Bacillus stearothermophilus. Cyanogen bromide fragments and partial sequence.";
Hoppe-Seyler's Z. Physiol. Chem. 364:879-892(1983).
[5]
X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) IN COMPLEX WITH NAD AND SUBSTRATE ANALOG.
DOI=10.1016/0022-2836(92)90733-Z; PubMed=1731077 [NCBI, ExPASy, EBI, Israel, Japan]
Wigley D.B., Gamblin S.J., Turkenburg J.P., Dodson E.J., Piontek K., Muirhead H., Holbrook J.J.;
"Structure of a ternary complex of an allosteric lactate dehydrogenase from Bacillus stearothermophilus at 2.5-A resolution.";
J. Mol. Biol. 223:317-335(1992).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M14788; AAA22568.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M19396; AAA22567.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A26053; DEBSLF.
3D structure databases
PDB
1LDB; X-ray; 2.80 A; A/B/C/D=1-317.[ExPASy / RCSB / EBI]
1LDN; X-ray; 2.50 A; A/B/C/D/E/F/G/H=1-316.[ExPASy / RCSB / EBI]
2LDB; X-ray; 3.00 A; A/B/C/D=1-317.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1LDB; -.
1LDN; -.
2LDB; -.
ModBase P00344.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004459; Molecular function: L-lactate dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0019642; Biological process: anaerobic glycolysis (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_00488; -; 1.
PBIL [Tree]
InterPro IPR001557; L-lactate/malate_DHase.
IPR011304; L-lactate_DHase.
IPR001236; Lactate/malate_DHase.
IPR015955; Lactate_DHase/Glyco_Ohase_4_C.
IPR016040; NAD(P)-bd.
Graphical view of domain structure.
Gene3D G3DSA:3.90.110.10; lact_mal_DH; 1.
G3DSA:3.40.50.720; NAD(P)-bd; 1.
Pfam PF02866; Ldh_1_C; 1.
PF00056; Ldh_1_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000102; Lac_mal_DH; 1.
PRINTS PR00086; LLDHDRGNASE.
TIGRFAMs TIGR01771; L-LDH-NAD; 1.
PROSITE PS00064; L_LDH; 1.
BLOCKS P00344.
ProtoNet P00344.
Other
LinkHub P00344; -.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Cytoplasm; Direct protein sequencing; Glycolysis; NAD; Oxidoreductase; Phosphoprotein.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   317  317     L-lactate dehydrogenase. PRO_0000168328
NP_BIND   15    43  29     NAD (By similarity). 
ACT_SITE   179   179        Proton acceptor. 
BINDING   92    92        Substrate. 
BINDING   124   124        NAD or substrate. 
BINDING   155   155        Substrate. 
BINDING   233   233        Substrate. 
MOD_RES   224   224        Phosphotyrosine (By similarity). 
CONFLICT   113   113        S -> H (in Ref. 3). 
STRAND   6    12  7      
HELIX   16    26  11      
TURN   27    29  3      
STRAND   32    37  6      
HELIX   41    54  14      
HELIX   55    57  3      
STRAND   62    64  3      
HELIX   69    71  3      
STRAND   76    80  5      
HELIX   96   112  17      
STRAND   117   121  5      
HELIX   126   137  12      
STRAND   143   146  4      
HELIX   148   150  3      
HELIX   152   163  12      
HELIX   168   170  3      
STRAND   175   177  3      
TURN   179   182  4      
HELIX   212   220  9      
HELIX   223   230  8      
HELIX   235   249  15      
STRAND   254   261  8      
STRAND   263   267  5      
STRAND   272   280  9      
STRAND   283   287  5      
TURN   296   299  4      
HELIX   300   308  9      
HELIX   310   313  4      
Sequence information
Length: 317 AA [This is the length of the unprocessed precursor] Molecular weight: 34863 Da [This is the MW of the unprocessed precursor] CRC64: 4B146CF681C91046 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MKNNGGARVV VIGAGFVGAS YVFALMNQGI ADEIVLIDAN ESKAIGDAMD FNHGKVFAPK 

        70         80         90        100        110        120 
PVDIWHGDYD DCRDADLVVI CAGANQKPGE TRLDLVDKNI AIFRSIVESV MASGFQGLFL 

       130        140        150        160        170        180 
VATNPVDILT YATWKFSGLP HERVIGSGTI LDTARFRFLL GEYFSVAPQN VHAYIIGEHG 

       190        200        210        220        230        240 
DTELPVWSQA YIGVMPIRKL VESKGEEAQK DLERIFVNVR DAAYQIIEKK GATYYGIAMG 

       250        260        270        280        290        300 
LARVTRAILH NENAILTVSA YLDGLYGERD VYIGVPAVIN RNGIREVIEI ELNDDEKNRF 

       310 
HHSAATLKSV LARAFTR 

P00344 in FASTA format

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