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UniProtKB/Swiss-Prot entry P00326


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ADH1G_HUMAN
Primary accession number P00326
Secondary accession numbers Q4PJ18 Q5WRV0 Q6LBW4 Q6NWV0 Q6NZA7
Integrated into Swiss-Prot on July 21, 1986
Sequence was last modified on January 23, 2007 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 97)
Name and origin of the protein
Protein name Alcohol dehydrogenase 1C
Synonyms EC 1.1.1.1
Alcohol dehydrogenase subunit gamma
Gene name
Name: ADH1C
Synonyms: ADH3
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANTS GAMMA-2 GLN-272 AND VAL-350.
TISSUE=Liver;
DOI=10.1111/j.1432-1033.1986.tb09855.x; PubMed=3758060 [NCBI, ExPASy, EBI, Israel, Japan]
Hoeoeg J.-O., Heden L.-O., Larsson K., Joernvall H.;
"The gamma 1 and gamma 2 subunits of human liver alcohol dehydrogenase. cDNA structures, two amino acid replacements, and compatibility with changes in the enzymatic properties.";
Eur. J. Biochem. 159:215-218(1986).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Liver;
PubMed=2935875 [NCBI, ExPASy, EBI, Israel, Japan]
Ikuta T., Szeto S., Yoshida A.;
"Three human alcohol dehydrogenase subunits: cDNA structure and molecular and evolutionary divergence.";
Proc. Natl. Acad. Sci. U.S.A. 83:634-638(1986).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=1524834 [NCBI, ExPASy, EBI, Israel, Japan]
Yokoyama S., Matsuo Y., Rajasekharan S., Yokoyama R.;
"Molecular structure of the human alcohol dehydrogenase 3 gene.";
Jpn. J. Genet. 67:167-171(1992).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS HIS-48; SER-166; GLN-272; VAL-350 AND THR-352.
Livingston R.J., Rieder M.J., Shaffer T., Bertucci C., Baier C.N., Rajkumar N., Willa H.T., Daniels M., Downing T.K., Stanaway I.B., Nguyen C.P., Gildersleeve H., Cassidy C.M., Johnson E.J., Swanson J.E., McFarland I., Yool B., Park C., Nickerson D.A.;
"NIEHS-SNPs, environmental genome project, NIEHS ES15478, Department of Genome Sciences, Seattle, WA (URL: http://egp.gs.washington.edu).";
Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANTS GAMMA-2 GLN-272 AND VAL-350.
TISSUE=Brain, and Femoral artery;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
PROTEIN SEQUENCE OF 2-375.
TISSUE=Liver;
DOI=10.1111/j.1432-1033.1984.tb08575.x; PubMed=6391921 [NCBI, ExPASy, EBI, Israel, Japan]
Buhler R., Hempel J., Kaiser R., de Zalenski C., von Wartburg J.-P., Joernvall H.;
"Human liver alcohol dehydrogenase. 2. The primary structure of the gamma 1 protein chain.";
Eur. J. Biochem. 145:447-453(1984).
Comments
  • CATALYTIC ACTIVITY: An alcohol + NAD+ = an aldehyde or ketone + NADH.
  • COFACTOR: Binds 2 zinc ions per subunit.
  • SUBUNIT: Dimer of identical or non-identical chains of three types; alpha, beta and gamma.
  • SUBCELLULAR LOCATION: Cytoplasm.
  • POLYMORPHISM: Two main alleles are known, ADH3*1 or gamma-1 has Arg-272/Ile-350 while ADH3*2 or gamma-2 has Gln-272/Val-350. ADH3*1 is associated with a fast rate of ethanol oxidation and ADH3*2 with a slow rate.
  • MISCELLANEOUS: There are 7 different ADH's isozymes in human: three belongs to class-I: alpha, beta, and gamma, one to class-II: pi, one to class-III: chi, one to class-IV: ADH7 and one to class-V: ADH6.
  • SIMILARITY: Belongs to the zinc-containing alcohol dehydrogenase family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X04299; CAA27842.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X04350; CAA27876.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M12272; AAC41757.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D11067; BAC06856.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
DQ088981; AAY68222.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC062476; AAH62476.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC066227; AAH66227.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC066228; AAH66228.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC067419; AAH67419.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC067420; AAH67420.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC067421; AAH67421.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC067422; AAH67422.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC074771; AAH74771.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC074786; AAH74786.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR C25428; DEHUAG.
RefSeq NP_000660.1; -.
UniGene Hs.654537
3D structure databases
PDB
1DDA; Model; -; A/B=1-375.[ExPASy / RCSB / EBI]
1HT0; X-ray; 2.00 A; A/B=1-375.[ExPASy / RCSB / EBI]
1U3W; X-ray; 1.45 A; A/B=1-375.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1DDA; -.
1HT0; -.
1U3W; -.
ModBase P00326.
PTM databases
PhosphoSite P00326; -.
Enzyme and pathway databases
Reactome REACT_2063; Metabolism of xenobiotics.
Polymorphism databases
NIEHS-SNPs ADH1C.
Organism-specific databases
H-InvDB HIX0031470; -.
HGNC HGNC:251; ADH1C.
GenAtlas ADH1C.
MIM 103730; gene. [NCBI / EBI]
PharmGKB PA24572; -.
GeneCards P00326.
Gene expression databases
ArrayExpress P00326; -.
CleanEx HS_ADH1C; -.
GermOnline ENSG00000196616; Homo sapiens.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (non-traceable author statement from UniProtKB).
GO:0004024; Molecular function: alcohol dehydrogenase activity, zinc-dependent (non-traceable author statement from UniProtKB).
GO:0006066; Biological process: cellular alcohol metabolic process (non-traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR013154; AlcDHase_GroES-like.
IPR002085; AlcDHase_SF_Zn.
IPR013149; AlcDHase_Zn-bd.
IPR002328; AlcDHase_Zn_CS.
Graphical view of domain structure.
PANTHER PTHR11695; ADH_Sf_Zn; 1.
Pfam PF08240; ADH_N; 1.
PF00107; ADH_zinc_N; 1.
Pfam graphical view of domain structure.
PROSITE PS00059; ADH_ZINC; 1.
BLOCKS P00326.
ProtoNet P00326.
Genome annotation databases
Ensembl ENSG00000196616; Homo sapiens. [Contig view]
GeneID 126; -.
KEGG hsa:126; -.
Phylogenomic databases
HOVERGEN P00326; -.
Other
DrugBank DB01213; Fomepizole.
DB00157; NADH.
NextBio 503; -.
SOURCE ADH1C; Homo sapiens.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Acetylation; Cytoplasm; Direct protein sequencing; Metal-binding; NAD; Oxidoreductase; Polymorphism; Zinc.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   375  374     Alcohol dehydrogenase 1C. PRO_0000160664
METAL   47    47        Zinc 1; catalytic. 
METAL   68    68        Zinc 1; catalytic. 
METAL   98    98        Zinc 2. 
METAL   101   101        Zinc 2. 
METAL   104   104        Zinc 2. 
METAL   112   112        Zinc 2. 
METAL   175   175        Zinc 1; catalytic. 
MOD_RES   2     2        N-acetylserine. 
VARIANT   48    48  1     R -> H. VAR_023992 [3D]
VARIANT   166   166  1     P -> S. VAR_023993 [3D]
VARIANT   272   272  1     R -> Q (in allele ADH3*2/gamma-2; dbSNP:rs1693482 [NCBI]). VAR_000428 [3D]
VARIANT   350   350  1     I -> V (in allele ADH3*2/gamma-2; dbSNP:rs698 [NCBI]). VAR_000429 [3D]
VARIANT   352   352  1     P -> T. VAR_023994 [3D]
CONFLICT   130   130        Missing (in Ref. 6; AA sequence). 
CONFLICT   171   171        C -> R (in Ref. 5; AAH67421). 
STRAND   8    15  8      
STRAND   23    29  7      
STRAND   36    45  10      
HELIX   48    54  7      
STRAND   62    65  4      
STRAND   69    77  9      
STRAND   89    92  4      
STRAND   99   101  3      
HELIX   102   105  4      
STRAND   117   119  3      
STRAND   131   133  3      
STRAND   136   139  4      
TURN   142   144  3      
STRAND   147   154  8      
HELIX   155   157  3      
STRAND   158   160  3      
HELIX   167   170  4      
HELIX   171   174  4      
HELIX   176   185  10      
TURN   186   188  3      
STRAND   195   199  5      
HELIX   203   214  12      
STRAND   218   223  6      
HELIX   227   229  3      
HELIX   230   235  6      
STRAND   239   242  4      
HELIX   244   246  3      
HELIX   251   258  8      
TURN   259   261  3      
STRAND   262   268  7      
HELIX   273   282  10      
TURN   285   287  3      
STRAND   289   292  4      
STRAND   302   304  3      
HELIX   307   310  4      
STRAND   314   317  4      
HELIX   320   322  3      
HELIX   325   337  13      
HELIX   344   346  3      
STRAND   347   352  6      
HELIX   353   355  3      
HELIX   356   364  9      
STRAND   369   374  6      
Sequence information
Length: 375 AA [This is the length of the unprocessed precursor] Molecular weight: 39868 Da [This is the MW of the unprocessed precursor] CRC64: 414D73CC4C104C84 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSTAGKVIKC KAAVLWELKK PFSIEEVEVA PPKAHEVRIK MVAAGICRSD EHVVSGNLVT 

        70         80         90        100        110        120 
PLPVILGHEA AGIVESVGEG VTTVKPGDKV IPLFTPQCGK CRICKNPESN YCLKNDLGNP 

       130        140        150        160        170        180 
RGTLQDGTRR FTCSGKPIHH FVGVSTFSQY TVVDENAVAK IDAASPLEKV CLIGCGFSTG 

       190        200        210        220        230        240 
YGSAVKVAKV TPGSTCAVFG LGGVGLSVVM GCKAAGAARI IAVDINKDKF AKAKELGATE 

       250        260        270        280        290        300 
CINPQDYKKP IQEVLKEMTD GGVDFSFEVI GRLDTMMASL LCCHEACGTS VIVGVPPDSQ 

       310        320        330        340        350        360 
NLSINPMLLL TGRTWKGAIF GGFKSKESVP KLVADFMAKK FSLDALITNI LPFEKINEGF 

       370 
DLLRSGKSIR TVLTF 

P00326 in FASTA format

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