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UniProtKB/Swiss-Prot entry O43548


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name TGM5_HUMAN
Primary accession number O43548
Secondary accession numbers O43549 Q0VF40 Q9UEZ4
Integrated into Swiss-Prot on July 15, 1999
Sequence was last modified on January 23, 2007 (Sequence version 4)
Annotations were last modified on    July 22, 2008 (Entry version 75)
Name and origin of the protein
Protein name Protein-glutamine gamma-glutamyltransferase 5
Synonyms EC 2.3.2.13
Transglutaminase-5
TGase 5
Transglutaminase X
TGase X
TGX
TG(X)
Gene name
Name: TGM5
Synonyms: TGMX
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS LONG AND SHORT).
TISSUE=Foreskin;
DOI=10.1074/jbc.273.6.3452; PubMed=9452468 [NCBI, ExPASy, EBI, Israel, Japan]
Aeschlimann D., Koeller M.K., Allen-Hoffmann B.L., Mosher D.F.;
"Isolation of a cDNA encoding a novel member of the transglutaminase gene family from human keratinocytes. Detection and identification of transglutaminase gene products based on reverse transcription-polymerase chain reaction with degenerate primers.";
J. Biol. Chem. 273:3452-3460(1998).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS SER-67 AND GLY-352.
DOI=10.1074/jbc.M102553200; PubMed=11390390 [NCBI, ExPASy, EBI, Israel, Japan]
Grenard P., Bates M.K., Aeschlimann D.;
"Evolution of transglutaminase genes: identification of a transglutaminase gene cluster on human chromosome 15q15. Structure of the gene encoding transglutaminase X and a novel gene family member, transglutaminase Z.";
J. Biol. Chem. 276:33066-33078(2001).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM LONG).
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
PROTEIN SEQUENCE OF 2-16, SUBCELLULAR LOCATION, ACETYLATION AT ALA-2, INDUCTION BY TPA AND CALCIUM, AND MASS SPECTROMETRY.
DOI=10.1007/s00726-004-0093-5; PubMed=15290349 [NCBI, ExPASy, EBI, Israel, Japan]
Rufini A., Vilbois F., Paradisi A., Oddi S., Tartaglione R., Leta A., Bagetta G., Guerrieri P., Finazzi-Agro' A., Melino G., Candi E.;
"Transglutaminase 5 is acetylated at the N-terminal end.";
Amino Acids 26:425-430(2004).
[5]
VARIANT APSS CYS-113, VARIANT MET-109, CHARACTERIZATION OF VARIANT APSS CYS-113, AND CHARACTERIZATION OF VARIANT MET-109.
DOI=10.1086/497707; PubMed=16380904 [NCBI, ExPASy, EBI, Israel, Japan]
Cassidy A.J., van Steensel M.A.M., Steijlen P.M., van Geel M., van der Velden J., Morley S.M., Terrinoni A., Melino G., Candi E., McLean W.H.I.;
"A homozygous missense mutation in TGM5 abolishes epidermal transglutaminase 5 activity and causes acral peeling skin syndrome.";
Am. J. Hum. Genet. 77:909-917(2005).
Comments
  • FUNCTION: Catalyzes the cross-linking of proteins and the conjugation of polyamines to proteins. Contributes to the formation of the cornified cell envelope of keratinocytes.
  • CATALYTIC ACTIVITY: Protein glutamine + alkylamine = protein N5-alkylglutamine + NH3.
  • COFACTOR: Binds 1 calcium ion per subunit (By similarity).
  • SUBCELLULAR LOCATION: Cytoplasm. Note=Associated with intermediate filaments.
  • ALTERNATIVE PRODUCTS: 2 named isoforms [FASTA] produced by alternative splicing.
    NameLong
    Isoform IDO43548-1
    This is the isoform sequence displayed in this entry.
    NameShort
    Isoform IDO43548-2
    Features which should be applied to build the isoform sequence: VSP_006415.
  • TISSUE SPECIFICITY: Expressed in foreskin keratinocytes.
  • INDUCTION: By tetradecanoylphorbolacetate (TPA) and calcium in NHEK cells.
  • DISEASE: Defects in TGM5 are a cause of peeling skin syndrome acral type (APSS) [MIM:609796, 270300]. Peeling skin syndrome (PSS) is an autosomal recessive genodermatosis characterized by the continuous shedding of the outer layers of the epidermis from birth and throughout life. In some cases of PSS, skin peeling is accompanied by erythema, vesicular lesions, or, in rare cases, other ectodermal features, like fragile hair and nail abnormalities. Two main subtypes, noninflammatory type A and inflammatory type B, have been suggested. However, it is clear from the dermatology literature that there are additional subtypes. In some families, an acral form of PSS (APSS) has been reported, in which skin peeling is strictly limited to the dorsa of the hands and feet, and, again, ultrastructural and histological analysis shows a level of blistering high in the epidermis at the stratum granulosum-stratum corneum junction.
  • SIMILARITY: Belongs to the transglutaminase superfamily. Transglutaminase family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF035960; AAC02978.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF035961; AAC02979.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF206510; AAF23981.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF206502; AAF23981.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF206503; AAF23981.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF206504; AAF23981.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF206505; AAF23981.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF206506; AAF23981.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF206507; AAF23981.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF206508; AAF23981.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF206509; AAF23981.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC119009; AAI19010.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_004236.1; -.
NP_963925.2; -.
UniGene Hs.129719
3D structure databases
HSSP Q08188; 1L9M. [HSSP ENTRY / PDB]
ModBase O43548.
PTM databases
PhosphoSite O43548; -.
Organism-specific databases
H-InvDB HIX0038074; -.
HIX0038097; -.
HGNC HGNC:11781; TGM5.
GenAtlas TGM5.
MIM 270300; phenotype. [NCBI / EBI]
603805; gene. [NCBI / EBI]
609796; phenotype. [NCBI / EBI]
Orphanet 817; Skin peeling syndrome.
PharmGKB PA36494; -.
GeneCards O43548.
Gene expression databases
ArrayExpress O43548; -.
CleanEx HS_TGM5; -.
GermOnline ENSG00000104055; Homo sapiens.
Ontologies
GO
GO:0003810; Molecular function: protein-glutamine gamma-glutamyltransferase activity (traceable author statement from ProtInc).
GO:0008544; Biological process: epidermis development (traceable author statement from ProtInc).
GO:0006464; Biological process: protein modification process (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR008957; Fibronectin_typ-III-like_fold.
IPR013783; Ig-like_fold.
IPR008958; Transglutaminase_C.
IPR013808; Transglutaminase_CS.
IPR001102; Transglutaminase_N.
IPR002931; Trnsglumase_like.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.30; FN_III-like; 1.
G3DSA:2.60.40.10; Ig-like_fold; 2.
Pfam PF00927; Transglut_C; 2.
PF01841; Transglut_core; 1.
PF00868; Transglut_N; 1.
Pfam graphical view of domain structure.
SMART SM00460; TGc; 1.
SMART graphical view of domain structure.
PROSITE PS00547; TRANSGLUTAMINASES; 1.
BLOCKS O43548.
Genome annotation databases
Ensembl ENSG00000104055; Homo sapiens. [Contig view]
GeneID 9333; -.
KEGG hsa:9333; -.
Phylogenomic databases
HOGENOM O43548; -.
HOVERGEN O43548; -.
Other
DrugBank DB00130; L-Glutamine.
SOURCE TGM5; Homo sapiens.
ProtoNet O43548.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Acetylation; Acyltransferase; Alternative splicing; Calcium; Cytoplasm; Direct protein sequencing; Disease mutation; Metal-binding; Polymorphism; Transferase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   720  719     Protein-glutamine gamma-glutamyltransferase 5. PRO_0000213713
ACT_SITE   278   278        By similarity. 
ACT_SITE   337   337        By similarity. 
ACT_SITE   360   360        By similarity. 
METAL   400   400        Calcium (By similarity). 
METAL   402   402        Calcium (By similarity). 
METAL   448   448        Calcium (By similarity). 
METAL   453   453        Calcium (By similarity). 
MOD_RES   2     2        N-acetylalanine. 
VAR_SEQ   64   145        Missing (in isoform Short). VSP_006415
VARIANT   67    67  1     P -> S. VAR_013248 
VARIANT   109   109  1     T -> M. VAR_025848 
VARIANT   113   113  1     G -> C (in APSS; completely abolishes the enzyme activity). VAR_025849 
VARIANT   352   352  1     A -> G. VAR_013249 
Sequence information
Length: 720 AA [This is the length of the unprocessed precursor] Molecular weight: 80778 Da [This is the MW of the unprocessed precursor] CRC64: 9CF68884B48BAE1C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAQGLEVALT DLQSSRNNVR HHTEEITVDH LLVRRGQAFN LTLYFRNRSF QPGLDNIIFV 

        70         80         90        100        110        120 
VETGPLPDLA LGTRAVFSLA RHHSPSPWIA WLETNGATST EVSLCAPPTA AVGRYLLKIH 

       130        140        150        160        170        180 
IDSFQGSVTA YQLGEFILLF NPWCPEDAVY LDSEPQRQEY VMNDYGFIYQ GSKNWIRPCP 

       190        200        210        220        230        240 
WNYGQFEDKI IDICLKLLDK SLHFQTDPAT DCALRGSPVY VSRVVCAMIN SNDDNGVLNG 

       250        260        270        280        290        300 
NWSENYTDGA NPAEWTGSVA ILKQWNATGC QPVRYGQCWV FAAVMCTVMR CLGIPTRVIT 

       310        320        330        340        350        360 
NFDSGHDTDG NLIIDEYYDN TGRILGNKKK DTIWNFHVWN ECWMARKDLP PAYGGWQVLD 

       370        380        390        400        410        420 
ATPQEMSNGV YCCGPASVRA IKEGEVDLNY DTPFVFSMVN ADCMSWLVQG GKEQKLHQDT 

       430        440        450        460        470        480 
SSVGNFISTK SIQSDERDDI TENYKYEEGS LQERQVFLKA LQKLKARSFH GSQRGAELQP 

       490        500        510        520        530        540 
SRPTSLSQDS PRSLHTPSLR PSDVVQVSLK FKLLDPPNMG QDICFVLLAL NMSSQFKDLK 

       550        560        570        580        590        600 
VNLSAQSLLH DGSPLSPFWQ DTAFITLSPK EAKTYPCKIS YSQYSQYLST DKLIRISALG 

       610        620        630        640        650        660 
EEKSSPEKIL VNKIITLSYP SITINVLGAA VVNQPLSIQV IFSNPLSEQV EDCVLTVEGS 

       670        680        690        700        710        720 
GLFKKQQKVF LGVLKPQHQA SIILETVPFK SGQRQIQANM RSNKFKDIKG YRNVYVDFAL 

O43548 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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