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UniProtKB/Swiss-Prot entry O15228


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name GNPAT_HUMAN
Primary accession number O15228
Secondary accession numbers Q5TBH7 Q9BWC2
Integrated into Swiss-Prot on December 15, 1998
Sequence was last modified on January 1, 1998 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 90)
Name and origin of the protein
Protein name Dihydroxyacetone phosphate acyltransferase
Synonyms DHAP-AT
DAP-AT
EC 2.3.1.42
Glycerone-phosphate O-acyltransferase
Acyl-CoA:dihydroxyacetonephosphateacyltransferase
Gene name
Name: GNPAT
Synonyms: DAPAT, DHAPAT
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Brain;
DOI=10.1016/S0014-5793(97)01495-6; PubMed=9459311 [NCBI, ExPASy, EBI, Israel, Japan]
Thai T.-P., Heid H., Rackwitz H.-R., Hunziker A., Gorgas K., Just W.W.;
"Ether lipid biosynthesis: isolation and molecular characterization of human dihydroxyacetonephosphate acyltransferase.";
FEBS Lett. 420:205-211(1997).
[2]
NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 12-33, AND VARIANTS RCDP2 CYS-211 AND HIS-211.
DOI=10.1093/hmg/7.5.847; PubMed=9536089 [NCBI, ExPASy, EBI, Israel, Japan]
Ofman R., Hettema E.H., Hogenhout E.M., Caruso U., Muijsers A.O., Wanders R.J.A.;
"Acyl-CoA:dihydroxyacetonephosphate acyltransferase: cloning of the human cDNA and resolution of the molecular basis in rhizomelic chondrodysplasia punctata type 2.";
Hum. Mol. Genet. 7:847-853(1998).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1006/bbrc.2001.4407; PubMed=11237722 [NCBI, ExPASy, EBI, Israel, Japan]
Ofman R., Lajmir S., Wanders R.J.A.;
"Etherphospholipid biosynthesis and dihydroxyactetone-phosphate acyltransferase: resolution of the genomic organization of the human GNPAT gene and its use in the identification of novel mutations.";
Biochem. Biophys. Res. Commun. 281:754-760(2001).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/nature04727; PubMed=16710414 [NCBI, ExPASy, EBI, Israel, Japan]
Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K., Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.;
"The DNA sequence and biological annotation of human chromosome 1.";
Nature 441:315-321(2006).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT HIS-586.
TISSUE=Lung;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
IDENTIFICATION [LARGE SCALE ANALYSIS], AND MASS SPECTROMETRY.
Colinge J., Superti-Furga G., Bennett K.L.;
Submitted (OCT-2008) to UniProtKB.
[7]
VARIANTS RCDP2 HIS-211 AND GLY-519, AND CHARACTERIZATION OF VARIANTS RCDP2 HIS-211 AND GLY-519.
DOI=10.1093/hmg/10.2.127; PubMed=11152660 [NCBI, ExPASy, EBI, Israel, Japan]
Thai T.P., Rodemer C., Jauch A., Hunziker A., Moser A., Gorgas K., Just W.W.;
"Impaired membrane traffic in defective ether lipid biosynthesis.";
Hum. Mol. Genet. 10:127-136(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AJ002190; CAA05242.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF043937; AAC24505.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218233; AAG17547.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218223; AAG17547.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218224; AAG17547.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218225; AAG17547.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218226; AAG17547.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218227; AAG17547.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218228; AAG17547.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218229; AAG17547.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218230; AAG17547.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218231; AAG17547.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF218232; AAG17547.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL137801; CAI21988.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL117352; CAI21988.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL117352; CAI23094.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL137801; CAI23094.1; JOINED; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC000450; AAH00450.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
IPI IPI00005677; -.
RefSeq NP_055051.1; -.
UniGene Hs.498028
3D structure databases
ModBase O15228.
Protein-protein interaction databases
IntAct O15228; 1.
PTM databases
PhosphoSite O15228; -.
Enzyme and pathway databases
BRENDA 2.3.1.42; 247.
Reactome REACT_1407; Synthesis of lysophosphatidic acid from dihydroxyacetone phosphate.
Organism-specific databases
GeneCards GC01P229443; -.
H-InvDB HIX0001692; -.
HGNC HGNC:4416; GNPAT.
GenAtlas GNPAT.
MIM 222765; phenotype. [NCBI / EBI]
602744; gene. [NCBI / EBI]
Orphanet 177; Chondrodysplasia punctata, rhizomelic type.
PharmGKB PA28795; -.
Gene expression databases
ArrayExpress O15228; -.
Bgee O15228; -.
CleanEx HS_GNPAT; -.
GermOnline ENSG00000116906; Homo sapiens.
Ontologies
GO
GO:0005829; Cellular component: cytosol (inferred from experiment from Reactome).
GO:0005778; Cellular component: peroxisomal membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0016287; Molecular function: glycerone-phosphate O-acyltransferase activity (inferred from electronic annotation from EC).
GO:0006631; Biological process: fatty acid metabolic process (traceable author statement from ProtInc).
GO:0009887; Biological process: organ morphogenesis (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR002123; Acyltransferase.
Graphical view of domain structure.
Pfam PF01553; Acyltransferase; 1.
Pfam graphical view of domain structure.
SMART SM00563; PlsC; 1.
SMART graphical view of domain structure.
Proteomic databases
PRIDE O15228; -.
Genome annotation databases
Ensembl ENSG00000116906; Homo sapiens. [Contig view]
GeneID 8443; -.
KEGG hsa:8443; -.
NMPDR fig|9606.3.peg.3243; -.
Phylogenomic databases
HOVERGEN O15228; -.
OMA O15228; GSIHVYF.
Other
NextBio 31586; -.
SOURCE GNPAT; Homo sapiens.
ProtoNet O15228.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Acyltransferase; Cataract; Direct protein sequencing; Disease mutation; Dwarfism; Membrane; Peroxisome; Rhizomelic chondrodysplasia punctata; Transferase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   680  680     Dihydroxyacetone phosphate acyltransferase. PRO_0000195246
MOTIF   162   167  6     HXXXXD motif. 
MOTIF   678   680  3     Microbody targeting signal (Potential). 
COMPBIAS   3     9  7     Poly-Ser. 
VARIANT   211   211  1     R -> C (in RCDP2). VAR_006357 
VARIANT   211   211  1     R -> H (in RCDP2; complete loss of activity). VAR_006358 
VARIANT   495   495  1     V -> I (in dbSNP:rs11122266 [NCBI]). VAR_030696 
VARIANT   519   519  1     D -> G (in RCDP2; 70% reduction in activity; dbSNP:rs11558492 [NCBI]). VAR_025897 
VARIANT   586   586  1     Y -> H (in dbSNP:rs17849315 [NCBI]). VAR_030697 
CONFLICT   26    26        S -> K (in Ref. 2; AA sequence). 
CONFLICT   31    31        K -> N (in Ref. 2; AA sequence). 
Sequence information
Length: 680 AA [This is the length of the unprocessed precursor] Molecular weight: 77188 Da [This is the MW of the unprocessed precursor] CRC64: BDF624CCD4D92477 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MESSSSSNSY FSVGPTSPSA VVLLYSKELK KWDEFEDILE ERRHVSDLKF AMKCYTPLVY 

        70         80         90        100        110        120 
KGITPCKPID IKCSVLNSEE IHYVIKQLSK ESLQSVDVLR EEVSEILDEM SHKLRLGAIR 

       130        140        150        160        170        180 
FCAFTLSKVF KQIFSKVCVN EEGIQKLQRA IQEHPVVLLP SHRSYIDFLM LSFLLYNYDL 

       190        200        210        220        230        240 
PVPVIAAGMD FLGMKMVGEL LRMSGAFFMR RTFGGNKLYW AVFSEYVKTM LRNGYAPVEF 

       250        260        270        280        290        300 
FLEGTRSRSA KTLTPKFGLL NIVMEPFFKR EVFDTYLVPI SISYDKILEE TLYVYELLGV 

       310        320        330        340        350        360 
PKPKESTTGL LKARKILSEN FGSIHVYFGD PVSLRSLAAG RMSRSSYNLV PRYIPQKQSE 

       370        380        390        400        410        420 
DMHAFVTEVA YKMELLQIEN MVLSPWTLIV AVLLQNRPSM DFDALVEKTL WLKGLTQAFG 

       430        440        450        460        470        480 
GFLIWPDNKP AEEVVPASIL LHSNIASLVK DQVILKVDSG DSEVVDGLML QHITLLMCSA 

       490        500        510        520        530        540 
YRNQLLNIFV RPSLVAVALQ MTPGFRKEDV YSCFRFLRDV FADEFIFLPG NTLKDFEEGC 

       550        560        570        580        590        600 
YLLCKSEAIQ VTTKDILVTE KGNTVLEFLV GLFKPFVESY QIICKYLLSE EEDHFSEEQY 

       610        620        630        640        650        660 
LAAVRKFTSQ LLDQGTSQCY DVLSSDVQKN ALAACVRLGV VEKKKINNNC IFNVNEPATT 

       670        680 
KLEEMLGCKT PIGKPATAKL 

O15228 in FASTA format

View entry in raw text format (no links)
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