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UniProtKB/Swiss-Prot entry O02058


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PTPS_CAEEL
Primary accession number O02058
Secondary accession number Q2MGF4
Integrated into Swiss-Prot on November 1, 1997
Sequence was last modified on October 10, 2003 (Sequence version 2)
Annotations were last modified on    December 16, 2008 (Entry version 68)
Name and origin of the protein
Protein name Putative 6-pyruvoyl tetrahydrobiopterin synthase
Synonyms PTP synthase
PTPS
EC 4.2.3.12
Gene name
Name: ptps-1
ORFNames: B0041.6
From
Caenorhabditis elegans [TaxID: 6239] 
Taxonomy Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND ALTERNATIVE SPLICING.
STRAIN=Bristol N2;
DOI=10.1126/science.282.5396.2012; PubMed=9851916 [NCBI, ExPASy, EBI, Israel, Japan]
The C. elegans sequencing consortium;
"Genome sequence of the nematode C. elegans: a platform for investigating biology.";
Science 282:2012-2018(1998).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF000196; AAC24255.2; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF000196; ABC71844.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T34033; T34033.
RefSeq NP_001040626.1; -.
UniGene Cel.23560
3D structure databases
PDB
2G64; X-ray; 1.80 A; A=1-140.[ExPASy / RCSB / EBI]
PDBsum 2G64; -.
ModBase O02058.
Protein-protein interaction databases
IntAct O02058; 1.
Organism-specific databases
WormBase WBGene00015010; ptps-1.
WormPep B0041.6a; CE34237. [WormPep / WorfDB]
B0041.6b; CE39541. [WormPep / WorfDB]
Gene expression databases
ArrayExpress O02058; -.
Ontologies
GO
GO:0003874; Molecular function: 6-pyruvoyltetrahydropterin synthase activity (inferred from electronic annotation from InterPro).
GO:0042802; Molecular function: identical protein binding (inferred from physical interaction from IntAct).
GO:0008270; Molecular function: zinc ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0006729; Biological process: tetrahydrobiopterin biosynthetic process (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR007116; 6-PTP_synth.
IPR007115; 6-PTP_synth-rel.
Graphical view of domain structure.
PANTHER PTHR12589; 6_PTP_synth; 1.
Pfam PF01242; PTPS; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00039; 6PTHBS; 1.
PROSITE PS00987; PTPS_1; 1.
PS00988; PTPS_2; FALSE_NEG.
Genome annotation databases
Ensembl B0041.6; Caenorhabditis elegans. [Contig view]
GeneID 181823; -.
KEGG cel:B0041.6; -.
NMPDR fig|6239.3.peg.980; -.
Other
NextBio 915462; -.
ProtoNet O02058.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Alternative splicing; Complete proteome; Lyase; Metal-binding; Tetrahydrobiopterin biosynthesis; Zinc.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   140  140     Putative 6-pyruvoyl tetrahydrobiopterin synthase. PRO_0000057919
ACT_SITE   38    38        Proton acceptor (By similarity). 
ACT_SITE   84    84        Charge relay system (By similarity). 
ACT_SITE   129   129        Charge relay system (By similarity). 
METAL   19    19        Zinc (By similarity). 
METAL   44    44        Zinc (By similarity). 
METAL   46    46        Zinc (By similarity). 
VAR_SEQ   1     3        Missing (in isoform b). VSP_019291
STRAND   6    19  14      
HELIX   28    35  8      
HELIX   36    39  4      
STRAND   44    57  14      
TURN   60    62  3      
HELIX   68    80  13      
TURN   81    84  4      
HELIX   87    90  4      
HELIX   92    95  4      
HELIX   101   115  15      
HELIX   119   121  3      
STRAND   122   130  9      
STRAND   133   137  5      
Sequence information
Length: 140 AA [This is the length of the unprocessed precursor] Molecular weight: 16046 Da [This is the MW of the unprocessed precursor] CRC64: 7A677CE73A95882C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MFRMPIVTME RVDSFSAAHR LHSEKLSDAE NKETFGKCNN SNGHGHNYVW KVKLRGEVDP 

        70         80         90        100        110        120 
TSGMVYDLAK LKKEMSLVLD TVDHRNLDKD VEFFKTTVST SENVAIYMFE KLKSVMSNPS 

       130        140 
VLYKVTIEET PKNIFTYKGC 

O02058 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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