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UniProtKB/Swiss-Prot entry O00462


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name MANBA_HUMAN
Primary accession number O00462
Secondary accession numbers Q96BC3 Q9NYX9
Integrated into Swiss-Prot on July 15, 1998
Sequence was last modified on August 16, 2004 (Sequence version 3)
Annotations were last modified on    December 16, 2008 (Entry version 76)
Name and origin of the protein
Protein name Beta-mannosidase [Precursor]
Synonyms EC 3.2.1.25
Lysosomal beta A mannosidase
Mannanase
Mannase
Gene name
Name: MANBA
Synonyms: MANB1
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], INVOLVEMENT IN LYSOSOMAL BETA-MANNOSIDASIS, AND VARIANT ILE-253.
DOI=10.1093/hmg/7.1.75; PubMed=9384606 [NCBI, ExPASy, EBI, Israel, Japan]
Alkhayat A.H., Kraemer S.A., Leipprandt J.R., Macek M., Kleijer W.J., Friderici K.H.;
"Human beta-mannosidase cDNA characterization and first identification of a mutation associated with human beta-mannosidosis.";
Hum. Mol. Genet. 7:75-83(1998).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Chang H.-M., Tsai S.-F.;
"Genome sequencing of the chromosome 4q region implicated in human hepatocellular carcinoma pathogenesis.";
Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT MET-701.
TISSUE=Muscle;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
  • FUNCTION: Exoglycosidase that cleaves the single beta-linked mannose residue from the non-reducing end of all N-linked glycoprotein oligosaccharides.
  • CATALYTIC ACTIVITY: Hydrolysis of terminal, non-reducing beta-D-mannose residues in beta-D-mannosides.
  • PATHWAY: Glycan metabolism; N-glycan degradation.
  • SUBCELLULAR LOCATION: Lysosome.
  • DISEASE: Defects in MANBA are the cause of a mild disorder that affects peripheral and central nervous system myelin.
  • DISEASE: Defects in MANBA are the cause of lysosomal beta-mannosidosis [MIM:248510]. Beta-mannosidosis is an autosomal recessive lysosomal storage disease of glycoprotein catabolism. Clinical features are heterogeneous with a wide range of symptoms and age of onset. The disease is associated with a range of neurological involvement, including various degrees of mental retardation in most of the cases, hearing loss and speech impairment, hypotonia, epilepsy and peripheral neuropathy. Affected individuals have a profound reduction in beta-mannosidase activity in plasma, fibroblasts and leukocytes.
  • SIMILARITY: Belongs to the glycosyl hydrolase 2 family [view classification].
  • WEB RESOURCE: Name=GeneReviews; URL="http://www.genetests.org/query?gene=MANBA";.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U60337; AAC39573.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF213884; AAF35233.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC015743; AAH15743.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_005899.3; -.
UniGene Hs.480415
3D structure databases
ModBase O00462.
PTM databases
PhosphoSite O00462; -.
Organism-specific databases
GeneCards GC04M103771; -.
H-InvDB HIX0022086; -.
HGNC HGNC:6831; MANBA.
GenAtlas MANBA.
MIM 248510; phenotype. [NCBI / EBI]
609489; gene. [NCBI / EBI]
Orphanet 118; Beta-mannosidosis.
PharmGKB PA30577; -.
GeneCards O00462.
Gene expression databases
ArrayExpress O00462; -.
CleanEx HS_MANBA; -.
GermOnline ENSG00000109323; Homo sapiens.
Ontologies
GO
GO:0005764; Cellular component: lysosome (inferred from electronic annotation from UniProtKB-KW).
GO:0004567; Molecular function: beta-mannosidase activity (traceable author statement from ProtInc).
GO:0043169; Molecular function: cation binding (inferred from electronic annotation from InterPro).
GO:0005975; Biological process: carbohydrate metabolic process (inferred from electronic annotation from InterPro).
GO:0006464; Biological process: protein modification process (non-traceable author statement from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR006103; Glyco_hydro_2_TIM.
IPR013781; Glyco_hydro_sub_cat.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.80; Glyco_hydro_cat; 1.
Pfam PF02836; Glyco_hydro_2_C; 1.
Pfam graphical view of domain structure.
Proteomic databases
PeptideAtlas O00462; -.
Proteomics databases
PRIDE O00462; -.
Genome annotation databases
Ensembl ENSG00000109323; Homo sapiens. [Contig view]
GeneID 4126; -.
KEGG hsa:4126; -.
NMPDR fig|9606.3.peg.24477; -.
Phylogenomic databases
HOGENOM O00462; -.
HOVERGEN O00462; -.
Other
NextBio 16200; -.
SOURCE MANBA; Homo sapiens.
ProtoNet O00462.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Glycoprotein; Glycosidase; Hydrolase; Lysosome; Polymorphism; Signal.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    17  17     Potential. 
CHAIN   18   879  862     Beta-mannosidase. PRO_0000012166
ACT_SITE   457   457        Proton donor (By similarity). 
CARBOHYD   28    28        N-linked (GlcNAc...) (Potential). 
CARBOHYD   35    35        N-linked (GlcNAc...) (Potential). 
CARBOHYD   77    77        N-linked (GlcNAc...) (Potential). 
CARBOHYD   280   280        N-linked (GlcNAc...) (Potential). 
CARBOHYD   284   284        N-linked (GlcNAc...) (Potential). 
CARBOHYD   297   297        N-linked (GlcNAc...) (Potential). 
CARBOHYD   302   302        N-linked (GlcNAc...) (Potential). 
CARBOHYD   763   763        N-linked (GlcNAc...) (Potential). 
VARIANT   253   253  1     V -> I (in dbSNP:rs227368 [NCBI]). VAR_026232 
VARIANT   701   701  1     T -> M (in dbSNP:rs2866413 [NCBI]). VAR_026233 
CONFLICT   70    70        Y -> H (in Ref. 1; AAC39573). 
Sequence information
Length: 879 AA [This is the length of the unprocessed precursor] Molecular weight: 100895 Da [This is the MW of the unprocessed precursor] CRC64: FE8173A4276B722E [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRLHLLLLLA LCGAGTTAAE LSYSLRGNWS ICNGNGSLEL PGAVPGCVHS ALFQQGLIQD 

        70         80         90        100        110        120 
SYYRFNDLNY RWVSLDNWTY SKEFKIPFEI SKWQKVNLIL EGVDTVSKIL FNEVTIGETD 

       130        140        150        160        170        180 
NMFNRYSFDI TNVVRDVNSI ELRFQSAVLY AAQQSKAHTR YQVPPDCPPL VQKGECHVNF 

       190        200        210        220        230        240 
VRKEQCSFSW DWGPSFPTQG IWKDVRIEAY NICHLNYFTF SPIYDKSAQE WNLEIESTFD 

       250        260        270        280        290        300 
VVSSKPVGGQ VIVAIPKLQT QQTYSIELQP GKRIVELFVN ISKNITVETW WPHGHGNQTG 

       310        320        330        340        350        360 
YNMTVLFELD GGLNIEKSAK VYFRTVELIE EPIKGSPGLS FYFKINGFPI FLKGSNWIPA 

       370        380        390        400        410        420 
DSFQDRVTSE LLRLLLQSVV DANMNTLRVW GGGIYEQDEF YELCDELGIM VWQDFMFACA 

       430        440        450        460        470        480 
LYPTDQGFLD SVTAEVAYQI KRLKSHPSII IWSGNNENEE ALMMNWYHIS FTDRPIYIKD 

       490        500        510        520        530        540 
YVTLYVKNIR ELVLAGDKSR PFITSSPTNG AETVAEAWVS QNPNSNYFGD VHFYDYISDC 

       550        560        570        580        590        600 
WNWKVFPKAR FASEYGYQSW PSFSTLEKVS STEDWSFNSK FSLHRQHHEG GNKQMLYQAG 

       610        620        630        640        650        660 
LHFKLPQSTD PLRTFKDTIY LTQVMQAQCV KTETEFYRRS RSEIVDQQGH TMGALYWQLN 

       670        680        690        700        710        720 
DIWQAPSWAS LEYGGKWKML HYFAQNFFAP LLPVGFENEN TFYIYGVSDL HSDYSMTLSV 

       730        740        750        760        770        780 
RVHTWSSLEP VCSRVTERFV MKGGEAVCLY EEPVSELLRR CGNCTRESCV VSFYLSADHE 

       790        800        810        820        830        840 
LLSPTNYHFL SSPKEAVGLC KAQITAIISQ QGDIFVFDLE TSAVAPFVWL DVGSIPGRFS 

       850        860        870 
DNGFLMTEKT RTILFYPWEP TSKNELEQSF HVTSLTDIY 

O00462 in FASTA format

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View entry in raw text format (no links)
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