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UniProtKB/Swiss-Prot entry O00238


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BMR1B_HUMAN
Primary accession number O00238
Secondary accession number P78366
Integrated into Swiss-Prot on May 30, 2000
Sequence was last modified on July 1, 1997 (Sequence version 1)
Annotations were last modified on    April 8, 2008 (Entry version 84)
Name and origin of the protein
Protein name Bone morphogenetic protein receptor type-1B [Precursor]
Synonyms EC 2.7.11.30
CDw293 antigen
Gene name
Name: BMPR1B
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Prostate;
DOI=10.1038/sj.onc.1200964; PubMed=9178898 [NCBI, ExPASy, EBI, Israel, Japan]
Ide H., Katoh M., Sasaki H., Yoshida T., Aoki K., Nawa Y., Osada Y., Sugimura T., Terada M.;
"Cloning of human bone morphogenetic protein type IB receptor (BMPR-IB) and its expression in prostate cancer in comparison with other BMPRs.";
Oncogene 14:1377-1382(1997).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Ovary;
DOI=10.1007/s003359900990; PubMed=10051328 [NCBI, ExPASy, EBI, Israel, Japan]
Astroem A.-K., Jin D.F., Imamura T., Roijer E., Rosenzweig B., Miyazono K., ten Dijke P., Stenman G.;
"Chromosomal localization of three human genes encoding bone morphogenetic protein receptors.";
Mamm. Genome 10:299-302(1999).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=PNS;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
VARIANTS BDA2 LYS-200 AND TRP-486.
DOI=10.1073/pnas.2133476100; PubMed=14523231 [NCBI, ExPASy, EBI, Israel, Japan]
Lehmann K., Seemann P., Stricker S., Sammar M., Meyer B., Suering K., Majewski F., Tinschert S., Grzeschik K.-H., Mueller D., Knaus P., Nuernberg P., Mundlos S.;
"Mutations in bone morphogenetic protein receptor 1B cause brachydactyly type A2.";
Proc. Natl. Acad. Sci. U.S.A. 100:12277-12282(2003).
[5]
INVOLVEMENT IN ACROMESOMELIC CHONDRODYSPLASIA WITH GENITAL ANOMALIES.
DOI=10.1136/jmg.2004.023564; PubMed=15805157 [NCBI, ExPASy, EBI, Israel, Japan]
Demirhan O., Tuerkmen S., Schwabe G.C., Soyupak S., Akguel E., Tastemir D., Karahan D., Mundlos S., Lehmann K.;
"A homozygous BMPR1B mutation causes a new subtype of acromesomelic chondrodysplasia with genital anomalies.";
J. Med. Genet. 42:314-317(2005).
[6]
VARIANT BRACHYDACTYLY TYPE C/BDA2 GLN-486.
DOI=10.1038/sj.ejhg.5201708; PubMed=16957682 [NCBI, ExPASy, EBI, Israel, Japan]
Lehmann K., Seemann P., Boergermann J., Morin G., Reif S., Knaus P., Mundlos S.;
"A novel R486Q mutation in BMPR1B resulting in either a brachydactyly type C/symphalangism-like phenotype or brachydactyly type A2.";
Eur. J. Hum. Genet. 14:1248-1254(2006).
[7]
VARIANTS [LARGE SCALE ANALYSIS] HIS-31; TRP-149; HIS-224; ASN-297 AND GLN-371.
DOI=10.1038/nature05610; PubMed=17344846 [NCBI, ExPASy, EBI, Israel, Japan]
Greenman C., Stephens P., Smith R., Dalgliesh G.L., Hunter C., Bignell G., Davies H., Teague J., Butler A., Stevens C., Edkins S., O'Meara S., Vastrik I., Schmidt E.E., Avis T., Barthorpe S., Bhamra G., Buck G., Choudhury B., Clements J., Cole J., Dicks E., Forbes S., Gray K., Halliday K., Harrison R., Hills K., Hinton J., Jenkinson A., Jones D., Menzies A., Mironenko T., Perry J., Raine K., Richardson D., Shepherd R., Small A., Tofts C., Varian J., Webb T., West S., Widaa S., Yates A., Cahill D.P., Louis D.N., Goldstraw P., Nicholson A.G., Brasseur F., Looijenga L., Weber B.L., Chiew Y.-E., DeFazio A., Greaves M.F., Green A.R., Campbell P., Birney E., Easton D.F., Chenevix-Trench G., Tan M.-H., Khoo S.K., Teh B.T., Yuen S.T., Leung S.Y., Wooster R., Futreal P.A., Stratton M.R.;
"Patterns of somatic mutation in human cancer genomes.";
Nature 446:153-158(2007).
Comments
  • FUNCTION: On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for BMPS/OP-1.
  • CATALYTIC ACTIVITY: ATP + [receptor-protein] = ADP + [receptor-protein] phosphate.
  • COFACTOR: Magnesium or manganese (By similarity).
  • SUBCELLULAR LOCATION: Membrane; Single-pass type I membrane protein.
  • DISEASE: Defects in BMPR1B are the cause of acromesomelic chondrodysplasia with genital anomalies [MIM:609441]. Acromesomelic chondrodysplasias are rare hereditary skeletal disorders characterized by short stature, very short limbs, and hand/foot malformations. The severity of limb abnormalities increases from proximal to distal with profoundly affected hands and feet showing brachydactyly and/or rudimentary fingers (knob-like fingers).
  • DISEASE: Defects in BMPR1B are a cause of brachydactyly type A2 (BDA2) [MIM:112600]. Brachydactylies (BDs) are a group of inherited malformations characterized by shortening of the digits due to abnormal development of the phalanges and/or the metacarpals. They have been classified on an anatomic and genetic basis into five groups, A to E, including three subgroups (A1 to A3) that usually manifest as autosomal dominant traits. BDA2 was described first in a large Norwegian kindred. BDA2 is caused by mutations in BMPR1B gene and studies demonstrate that these mutations function as dominant negatives in vitro and in vivo.
  • SIMILARITY: Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
  • SIMILARITY: Contains 1 GS domain.
  • SIMILARITY: Contains 1 protein kinase domain.
  • WEB RESOURCE: Name=GeneReviews; URL="http://www.genetests.org/query?gene=BMPR1B";.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
D89675; BAA19765.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U89326; AAC28131.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC047773; AAH47773.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC069796; AAH69796.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC069803; AAH69803.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001194.1; -.
UniGene Hs.661426
3D structure databases
HSSP P36897; 1IAS. [HSSP ENTRY / PDB]
ModBase O00238.
Organism-specific databases
H-InvDB HIX0024604; -.
HGNC HGNC:1077; BMPR1B.
GeneLynx BMPR1B; Homo sapiens.
GenAtlas BMPR1B.
MIM 112600; phenotype. [NCBI / EBI]
603248; gene. [NCBI / EBI]
609441; phenotype. [NCBI / EBI]
Orphanet 69028; Brachydactyly.
PharmGKB PA25387; -.
GeneCards O00238.
Gene expression databases
ArrayExpress O00238; -.
CleanEx HS_BMPR1B; -.
GermOnline ENSG00000138696; Homo sapiens.
Ontologies
GO
GO:0005887; Cellular component: integral to plasma membrane (inferred by curator from UniProtKB).
GO:0043235; Cellular component: receptor complex (traceable author statement from UniProtKB).
GO:0005524; Molecular function: ATP binding (inferred from direct assay from HGNC).
GO:0046332; Molecular function: SMAD binding (inferred from direct assay from HGNC).
GO:0004675; Molecular function: transmembrane receptor protein serine/threonine kinase activity (inferred from mutant phenotype from UniProtKB).
GO:0030509; Biological process: BMP signaling pathway (non-traceable author statement from UniProtKB).
GO:0001502; Biological process: cartilage condensation (non-traceable author statement from UniProtKB).
GO:0001654; Biological process: eye development (inferred from sequence or structural similarity from UniProtKB).
GO:0035108; Biological process: limb morphogenesis (inferred from mutant phenotype from UniProtKB).
GO:0001550; Biological process: ovarian cumulus expansion (inferred from sequence or structural similarity from UniProtKB).
GO:0045597; Biological process: positive regulation of cell differentiation (inferred from mutant phenotype from UniProtKB).
GO:0006468; Biological process: protein amino acid phosphorylation (inferred from direct assay from HGNC).
QuickGo view.
Family and domain databases
InterPro IPR000333; Activin_II_recpt.
IPR000472; Activin_rcpt.
IPR000719; Prot_kinase_core.
IPR008271; Ser_thr_pkin_AS.
IPR003605; TGF_beta_rcpt_GS.
Graphical view of domain structure.
Pfam PF01064; Activin_recp; 1.
PF08515; TGF_beta_GS; 1.
Pfam graphical view of domain structure.
PRINTS PR00653; ACTIVIN2R.
ProDom PD000001; Prot_kinase; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00467; GS; 1.
SMART graphical view of domain structure.
PROSITE PS51256; GS; 1.
PS00107; PROTEIN_KINASE_ATP; 1.
PS50011; PROTEIN_KINASE_DOM; 1.
PS00108; PROTEIN_KINASE_ST; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS O00238.
Genome annotation databases
Ensembl ENSG00000138696; Homo sapiens. [Contig view]
GeneID 658; -.
KEGG hsa:658; -.
Other
LinkHub O00238; -.
SOURCE BMPR1B; Homo sapiens.
ProtoNet O00238.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Disease mutation; Kinase; Magnesium; Manganese; Membrane; Metal-binding; Nucleotide-binding; Polymorphism; Receptor; Serine/threonine-protein kinase; Signal; Transferase; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    13  13     Potential. 
CHAIN   14   502  489     Bone morphogenetic protein receptor type-1B. PRO_0000024412
TOPO_DOM   14   126  113     Extracellular (Potential). 
TRANSMEM   127   148  22     Potential. 
TOPO_DOM   149   502  354     Cytoplasmic (Potential). 
DOMAIN   174   203  30     GS. 
DOMAIN   204   494  291     Protein kinase. 
NP_BIND   210   218  9     ATP (By similarity). 
ACT_SITE   332   332        Proton acceptor (By similarity). 
BINDING   231   231        ATP (By similarity). 
VARIANT   31    31  1     R -> H (in a gastric adenocarcinoma sample; somatic mutation). VAR_041401 [3D]
VARIANT   149   149  1     R -> W. VAR_041402 
VARIANT   200   200  1     I -> K (in BDA2). VAR_023819 
VARIANT   224   224  1     R -> H. VAR_041403 
VARIANT   297   297  1     D -> N (in a metastatic melanoma sample; somatic mutation). VAR_041404 
VARIANT   371   371  1     R -> Q. VAR_041405 
VARIANT   486   486  1     R -> Q (in brachydactyly type C and BDA2; with also additional features of symphalangism-1). VAR_037967 
VARIANT   486   486  1     R -> W (in BDA2). VAR_023820 
Sequence information
Length: 502 AA [This is the length of the unprocessed precursor] Molecular weight: 56930 Da [This is the MW of the unprocessed precursor] CRC64: B283D9BF45535C79 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MLLRSAGKLN VGTKKEDGES TAPTPRPKVL RCKCHHHCPE DSVNNICSTD GYCFTMIEED 

        70         80         90        100        110        120 
DSGLPVVTSG CLGLEGSDFQ CRDTPIPHQR RSIECCTERN ECNKDLHPTL PPLKNRDFVD 

       130        140        150        160        170        180 
GPIHHRALLI SVTVCSLLLV LIILFCYFRY KRQETRPRYS IGLEQDETYI PPGESLRDLI 

       190        200        210        220        230        240 
EQSQSSGSGS GLPLLVQRTI AKQIQMVKQI GKGRYGEVWM GKWRGEKVAV KVFFTTEEAS 

       250        260        270        280        290        300 
WFRETEIYQT VLMRHENILG FIAADIKGTG SWTQLYLITD YHENGSLYDY LKSTTLDAKS 

       310        320        330        340        350        360 
MLKLAYSSVS GLCHLHTEIF STQGKPAIAH RDLKSKNILV KKNGTCCIAD LGLAVKFISD 

       370        380        390        400        410        420 
TNEVDIPPNT RVGTKRYMPP EVLDESLNRN HFQSYIMADM YSFGLILWEV ARRCVSGGIV 

       430        440        450        460        470        480 
EEYQLPYHDL VPSDPSYEDM REIVCIKKLR PSFPNRWSSD ECLRQMGKLM TECWAHNPAS 

       490        500 
RLTALRVKKT LAKMSESQDI KL 

O00238 in FASTA format

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