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UniProtKB/Swiss-Prot entry B1ITP1

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name SYK3_ECOLC
Primary accession number B1ITP1
Secondary accession numbers None
Integrated into Swiss-Prot on May 20, 2008
Sequence was last modified on April 29, 2008 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 6)
Name and origin of the protein
Protein name Putative lysyl-tRNA synthetase
Synonyms EC 6.1.1.6
Lysine--tRNA ligase
LysRS
GX
Gene name
Name: poxA
OrderedLocusNames: EcolC_3855
From
Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) [TaxID: 481805] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Ingram L., Richardson P.;
"Complete sequence of Escherichia coli C str. ATCC 8739.";
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000946; ACA79459.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001726786.1; -.
3D structure databases
ModBase B1ITP1.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from InterPro).
GO:0005524; Molecular function: ATP binding (inferred from electronic annotation from HAMAP).
GO:0004824; Molecular function: lysine-tRNA ligase activity (inferred from electronic annotation from HAMAP).
GO:0006430; Biological process: lysyl-tRNA aminoacylation (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00174; -; 1.
PBIL [Tree]
InterPro IPR004364; aa-tRNA-synt_II.
IPR006195; aa-tRNA-synth_II.
IPR004525; Lys-tRNA-synth-rel.
IPR002313; Lys-tRNA-synth_II.
Graphical view of domain structure.
PANTHER PTHR22594; aa-tRNA-synt_II; 1.
Pfam PF00152; tRNA-synt_2; 1.
Pfam graphical view of domain structure.
PROSITE PS50862; AA_TRNA_LIGASE_II; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
GeneID 6067544; -.
GenomeReviews CP000946_GR; EcolC_3855.
KEGG ecl:EcolC_3855; -.
CMR B1ITP1; EcolC_3855.
Other
ProtoNet B1ITP1.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Ligase; Nucleotide-binding; Protein biosynthesis.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   325  325     Putative lysyl-tRNA synthetase. PRO_1000077138
Sequence information
Length: 325 AA [This is the length of the unprocessed precursor] Molecular weight: 36962 Da [This is the MW of the unprocessed precursor] CRC64: F67A1649CA23E4CC [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MSETASWQPS ASIPNLLKRA AIMAEIRRFF ADRGVLEVET PCMSQATVTD IHLVPFETRF 

        70         80         90        100        110        120 
VGPGHSQGMN LWLMTSPEYH MKRLLVAGCG PVFQLCRSFR NEEMGRYHNP EFTMLEWYRP 

       130        140        150        160        170        180 
HYDMYRLMNE VDDLLQQVLD CPAAESLSYQ QAFLRYLEID PLSADKTQLR EVAAKLDLSN 

       190        200        210        220        230        240 
VADTEEDRDT LLQLLFTFGV EPNIGKEKPT FVYHFPASQA SLAQISTEDH RVAERFEVYY 

       250        260        270        280        290        300 
KGIELANGFH ELTDAREQQQ RFEQDNRKRA ARGLPQHPID QNLIDALKVG MPDCSGVALG 

       310        320 
VDRLVMLALG AETLAEVIAF SVDRA
B1ITP1 in FASTA format

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